anandmulay3
lassoan
/ ExtractSkin.py
Last active
May 24, 2022 17:53
This example demonstrates how to extract skin surface from an MRI image using thresholding and smoothing effect of Segment Editor
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| import SampleData | |
| sampleDataLogic = SampleData.SampleDataLogic() | |
| masterVolumeNode = sampleDataLogic.downloadMRHead() | |
| # Create segmentation | |
| segmentationNode = slicer.mrmlScene.AddNewNodeByClass("vtkMRMLSegmentationNode") | |
| segmentationNode.CreateDefaultDisplayNodes() # only needed for display | |
| segmentationNode.SetReferenceImageGeometryParameterFromVolumeNode(masterVolumeNode) | |
| addedSegmentID = segmentationNode.GetSegmentation().AddEmptySegment("skin") |