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April 15, 2020 20:01
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--- | |
title: "Coloring stuff!" | |
author: "Andrew Heiss" | |
date: "`r Sys.Date()`" | |
output: | |
xaringan::moon_reader: | |
lib_dir: "libs" | |
seal: false # No title slide | |
nature: | |
highlightStyle: github | |
highlightLines: true | |
countIncrementalSlides: false | |
ratio: "16:9" | |
--- | |
```{r setup, include=FALSE} | |
knitr::opts_chunk$set(warning = FALSE, message = FALSE, | |
fig.retina = 3, fig.align = "center") | |
``` | |
```{r load-libraries, include=FALSE} | |
library(tidyverse) | |
library(flair) | |
library(ggdag) | |
``` | |
# DAGs and models | |
```{r mpg-dag, echo=FALSE, fig.width=5, fig.height=3.5, out.width="40%"} | |
mpg_dag <- dagify(hwy ~ drv + disp + cyl, | |
disp ~ drv + cyl, | |
labels = c("hwy" = "Highway MPG", | |
"drv" = "Drive", | |
"disp" = "Displacement", | |
"cyl" = "Cylinders"), | |
coords = list(x = c(hwy = 3, drv = 2, disp = 2, cyl = 1), | |
y = c(hwy = 2, drv = 1, disp = 3, cyl = 2))) %>% | |
tidy_dagitty() | |
ggplot(mpg_dag, aes(x = x, y = y, xend = xend, yend = yend)) + | |
geom_dag_edges() + | |
geom_dag_point(aes(color = label)) + | |
geom_dag_label_repel(aes(label = label, fill = label), seed = 1234, | |
direction = "y", fontface = "bold", color = "white") + | |
scale_fill_manual(values = c("#39CCCC", "#2ECC40", "#0074D9", "#FF851B")) + | |
scale_color_manual(values = c("#39CCCC", "#2ECC40", "#0074D9", "#FF851B")) + | |
guides(color = FALSE, fill = FALSE) + | |
theme_dag() | |
``` | |
.pull-left[ | |
```{r example-model, include=FALSE, eval=FALSE} | |
model <- lm(hwy ~ drv + displ + cyl, | |
data = mpg) | |
``` | |
```{r colored-model, echo=FALSE} | |
decorate("example-model") %>% | |
flair("hwy", color = "#FF851B") %>% | |
flair("drv", color = "#0074D9") %>% | |
flair("displ", color = "#2ECC40") %>% | |
flair("cyl", color = "#39CCCC") | |
``` | |
] | |
.pull-right[ | |
$$ | |
\begin{aligned} | |
\color{#FF851B}{\text{Highway MPG }} =\ & \beta_0 + \beta_1 \color{#0074D9}{\text{Drive}} + \\ | |
&\beta_2 \color{#2ECC40}{\text{Displacement}} + \\ | |
&\beta_3 \color{#39CCCC}{\text{Cylinders}} + \varepsilon | |
\end{aligned} | |
$$ | |
] | |
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