patriciogonzalezvivo

Install Homebrew

ruby -e "$(curl -fsSL https://raw.github.com/mxcl/homebrew/go)"

Add PATH to ~/.bash_profile and ~/.zshrc

export PATH=/usr/local/bin:$PATH

andydawson

Implementing your own gradient function in Stan.

Here's a summary of how to implement a gradient function manually in Stan 2.10 in order to override autodiff. I wanted to do this because my run-times were long, and I knew I could save some time by hard-coding my gradient function. That being said, autodiff is great, and is almost always fast enough.

Step 1. Create the .stan file which implements the model.

Two reasons to do this:

1. This will allow you to easily generate a .cpp file that will contain the basic structure you need.
2. Great for testing to make sure your hacked code gives identical output to what you would get using Stan.

niksumeiko

#!/bin/bash
# Sometimes you need to move your existing git repository
# to a new remote repository (/new remote origin).
# Here are a simple and quick steps that does exactly this.
#
# Let's assume we call "old repo" the repository you wish
# to move, and "new repo" the one you wish to move to.
#
### Step 1. Make sure you have a local copy of all "old repo"
### branches and tags.

jrsmith3

import requests

def doi2bib(doi):
  """
  Return a bibTeX string of metadata for a given DOI.
  """

  url = "http://dx.doi.org/" + doi

  headers = {"accept": "application/x-bibtex"}

stefanschmidt

pdftk original.pdf output uncompressed.pdf uncompress
LANG=C sed -n '/^\/Annots/!p' uncompressed.pdf > stripped.pdf
pdftk stripped.pdf output final.pdf compress