Created
January 1, 2015 21:36
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Expected results when querying BridgeDb for "ensembl", using the bridgedbjs library.
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| [{ | |
| "@context": { | |
| "@vocab": "http://www.example.org/bridgedb/input-vocab/", | |
| "alternatePrefix": { | |
| "@id": "idot:alternatePrefix", | |
| "@type": "xsd:string" | |
| }, | |
| "baseIri": "@base", | |
| "biopax": { | |
| "@id": "http://www.biopax.org/release/biopax-level3.owl#", | |
| "@type": "@id" | |
| }, | |
| "bridgeDbInput": { | |
| "@id": "http://www.example.org/bridgedb/input-vocab/", | |
| "@type": "@id" | |
| }, | |
| "Dataset": { | |
| "@id": "void:Dataset", | |
| "@type": "@id" | |
| }, | |
| "db": { | |
| "@id": "biopax:db", | |
| "@container": "@set", | |
| "@type": "xsd:string" | |
| }, | |
| "dcterms": { | |
| "@id": "http://purl.org/dc/terms/", | |
| "@type": "@id" | |
| }, | |
| "EntityReference": { | |
| "@id": "biopax:EntityReference", | |
| "@type": "@id" | |
| }, | |
| "exampleIdentifier": { | |
| "@id": "idot:exampleIdentifier", | |
| "@type": "xsd:string" | |
| }, | |
| "exampleResource": { | |
| "@id": "void:exampleResource", | |
| "@type": "@id" | |
| }, | |
| "foaf": { | |
| "@id": "http://xmlns.com/foaf/0.1/", | |
| "@type": "@id" | |
| }, | |
| "gpml": { | |
| "@id": "http://vocabularies.wikipathways.org/gpml#", | |
| "@type": "@id" | |
| }, | |
| "identifier": { | |
| "@id": "biopax:id", | |
| "@type": "xsd:string" | |
| }, | |
| "identifierPattern": { | |
| "@id": "idot:identifierPattern", | |
| "@type": "xsd:string" | |
| }, | |
| "idot": { | |
| "@id": "http://identifiers.org/idot/", | |
| "@type": "@id" | |
| }, | |
| "isDataItemIn": { | |
| "@id": "SIO:SIO_001278", | |
| "@type": "@id" | |
| }, | |
| "schema": { | |
| "@id": "http://schema.org/", | |
| "@type": "@id" | |
| }, | |
| "name": { | |
| "@id": "schema:name", | |
| "@type": "xsd:string" | |
| }, | |
| "organism": { | |
| "@id": "biopax:organism", | |
| "@type": "@id" | |
| }, | |
| "owl": { | |
| "@id": "http://www.w3.org/2002/07/owl#", | |
| "@type": "@id" | |
| }, | |
| "preferredPrefix": { | |
| "@id": "idot:preferredPrefix", | |
| "@type": "xsd:string" | |
| }, | |
| "SIO": { | |
| "@id": "http://semanticscience.org/resource/", | |
| "@type": "@id" | |
| }, | |
| "subject": { | |
| "@id": "dcterms:subject", | |
| "@type": "@id" | |
| }, | |
| "void": { | |
| "@id": "http://rdfs.org/ns/void#", | |
| "@type": "@id" | |
| }, | |
| "xsd": { | |
| "@id": "http://www.w3.org/2001/XMLSchema#", | |
| "@type": "@id" | |
| }, | |
| "xref": { | |
| "@id": "biopax:xref", | |
| "@type": "@id" | |
| }, | |
| "webPage": { | |
| "@id": "foaf:page", | |
| "@type": "@id" | |
| } | |
| }, | |
| "_displayName": "Ensembl", | |
| "bridgeDbSystemCode": "En", | |
| "webPage": "http://www.ensembl.org/", | |
| "_iriPattern": "http://ensemblgenomes.org/id/$id", | |
| "exampleIdentifier": "ENSG00000139618", | |
| "bridgeDbType": "gene", | |
| "isPrimary": true, | |
| "identifierPattern": "^ENS[A-Z]*[FPTG]\\d{11}$", | |
| "_standardName": "Ensembl", | |
| "name": ["Ensembl"], | |
| "uriRegexPattern": "http://ensemblgenomes.org/id/(ENS[A-Z]*[FPTG]\\d{11})", | |
| "owl:sameAs": ["http://ensemblgenomes.org/id/", "urn:miriam:ensembl"], | |
| "@type": "Dataset", | |
| "preferredPrefix": "ensembl", | |
| "@id": "http://identifiers.org/ensembl", | |
| "subject": ["gpml:GeneProduct", "biopax:DnaReference"], | |
| "alternatePrefix": ["En"] | |
| }, { | |
| "@context": { | |
| "@vocab": "http://www.example.org/bridgedb/input-vocab/", | |
| "alternatePrefix": { | |
| "@id": "idot:alternatePrefix", | |
| "@type": "xsd:string" | |
| }, | |
| "baseIri": "@base", | |
| "biopax": { | |
| "@id": "http://www.biopax.org/release/biopax-level3.owl#", | |
| "@type": "@id" | |
| }, | |
| "bridgeDbInput": { | |
| "@id": "http://www.example.org/bridgedb/input-vocab/", | |
| "@type": "@id" | |
| }, | |
| "Dataset": { | |
| "@id": "void:Dataset", | |
| "@type": "@id" | |
| }, | |
| "db": { | |
| "@id": "biopax:db", | |
| "@container": "@set", | |
| "@type": "xsd:string" | |
| }, | |
| "dcterms": { | |
| "@id": "http://purl.org/dc/terms/", | |
| "@type": "@id" | |
| }, | |
| "EntityReference": { | |
| "@id": "biopax:EntityReference", | |
| "@type": "@id" | |
| }, | |
| "exampleIdentifier": { | |
| "@id": "idot:exampleIdentifier", | |
| "@type": "xsd:string" | |
| }, | |
| "exampleResource": { | |
| "@id": "void:exampleResource", | |
| "@type": "@id" | |
| }, | |
| "foaf": { | |
| "@id": "http://xmlns.com/foaf/0.1/", | |
| "@type": "@id" | |
| }, | |
| "gpml": { | |
| "@id": "http://vocabularies.wikipathways.org/gpml#", | |
| "@type": "@id" | |
| }, | |
| "identifier": { | |
| "@id": "biopax:id", | |
| "@type": "xsd:string" | |
| }, | |
| "identifierPattern": { | |
| "@id": "idot:identifierPattern", | |
| "@type": "xsd:string" | |
| }, | |
| "idot": { | |
| "@id": "http://identifiers.org/idot/", | |
| "@type": "@id" | |
| }, | |
| "isDataItemIn": { | |
| "@id": "SIO:SIO_001278", | |
| "@type": "@id" | |
| }, | |
| "schema": { | |
| "@id": "http://schema.org/", | |
| "@type": "@id" | |
| }, | |
| "name": { | |
| "@id": "schema:name", | |
| "@type": "xsd:string" | |
| }, | |
| "organism": { | |
| "@id": "biopax:organism", | |
| "@type": "@id" | |
| }, | |
| "owl": { | |
| "@id": "http://www.w3.org/2002/07/owl#", | |
| "@type": "@id" | |
| }, | |
| "preferredPrefix": { | |
| "@id": "idot:preferredPrefix", | |
| "@type": "xsd:string" | |
| }, | |
| "SIO": { | |
| "@id": "http://semanticscience.org/resource/", | |
| "@type": "@id" | |
| }, | |
| "subject": { | |
| "@id": "dcterms:subject", | |
| "@type": "@id" | |
| }, | |
| "void": { | |
| "@id": "http://rdfs.org/ns/void#", | |
| "@type": "@id" | |
| }, | |
| "xsd": { | |
| "@id": "http://www.w3.org/2001/XMLSchema#", | |
| "@type": "@id" | |
| }, | |
| "xref": { | |
| "@id": "biopax:xref", | |
| "@type": "@id" | |
| }, | |
| "webPage": { | |
| "@id": "foaf:page", | |
| "@type": "@id" | |
| } | |
| }, | |
| "_displayName": "Ensembl B. subtilis", | |
| "bridgeDbSystemCode": "EnBs", | |
| "webPage": "http://www.ensembl.org", | |
| "_iriPattern": "http://bacteria.ensembl.org/Bacillus/B_subtilis/Gene/Summary?g=$id", | |
| "exampleIdentifier": "EBBACG00000000013", | |
| "bridgeDbType": "gene", | |
| "organism": "Bacillus subtilis", | |
| "isPrimary": true, | |
| "identifierPattern": "EBBACG\\d{11}", | |
| "_standardName": "Ensembl", | |
| "name": ["Ensembl B. subtilis", "Ensembl"], | |
| "uriRegexPattern": "http://bacteria.ensembl.org/Bacillus/B_subtilis/Gene/Summary?g=(EBBACG\\d{11})", | |
| "owl:sameAs": ["http://bacteria.ensembl.org/Bacillus/B_subtilis/Gene/Summary?g="], | |
| "@type": "Dataset", | |
| "subject": ["gpml:GeneProduct", "biopax:DnaReference"], | |
| "alternatePrefix": ["EnBs"] | |
| }, { | |
| "@context": { | |
| "@vocab": "http://www.example.org/bridgedb/input-vocab/", | |
| "alternatePrefix": { | |
| "@id": "idot:alternatePrefix", | |
| "@type": "xsd:string" | |
| }, | |
| "baseIri": "@base", | |
| "biopax": { | |
| "@id": "http://www.biopax.org/release/biopax-level3.owl#", | |
| "@type": "@id" | |
| }, | |
| "bridgeDbInput": { | |
| "@id": "http://www.example.org/bridgedb/input-vocab/", | |
| "@type": "@id" | |
| }, | |
| "Dataset": { | |
| "@id": "void:Dataset", | |
| "@type": "@id" | |
| }, | |
| "db": { | |
| "@id": "biopax:db", | |
| "@container": "@set", | |
| "@type": "xsd:string" | |
| }, | |
| "dcterms": { | |
| "@id": "http://purl.org/dc/terms/", | |
| "@type": "@id" | |
| }, | |
| "EntityReference": { | |
| "@id": "biopax:EntityReference", | |
| "@type": "@id" | |
| }, | |
| "exampleIdentifier": { | |
| "@id": "idot:exampleIdentifier", | |
| "@type": "xsd:string" | |
| }, | |
| "exampleResource": { | |
| "@id": "void:exampleResource", | |
| "@type": "@id" | |
| }, | |
| "foaf": { | |
| "@id": "http://xmlns.com/foaf/0.1/", | |
| "@type": "@id" | |
| }, | |
| "gpml": { | |
| "@id": "http://vocabularies.wikipathways.org/gpml#", | |
| "@type": "@id" | |
| }, | |
| "identifier": { | |
| "@id": "biopax:id", | |
| "@type": "xsd:string" | |
| }, | |
| "identifierPattern": { | |
| "@id": "idot:identifierPattern", | |
| "@type": "xsd:string" | |
| }, | |
| "idot": { | |
| "@id": "http://identifiers.org/idot/", | |
| "@type": "@id" | |
| }, | |
| "isDataItemIn": { | |
| "@id": "SIO:SIO_001278", | |
| "@type": "@id" | |
| }, | |
| "schema": { | |
| "@id": "http://schema.org/", | |
| "@type": "@id" | |
| }, | |
| "name": { | |
| "@id": "schema:name", | |
| "@type": "xsd:string" | |
| }, | |
| "organism": { | |
| "@id": "biopax:organism", | |
| "@type": "@id" | |
| }, | |
| "owl": { | |
| "@id": "http://www.w3.org/2002/07/owl#", | |
| "@type": "@id" | |
| }, | |
| "preferredPrefix": { | |
| "@id": "idot:preferredPrefix", | |
| "@type": "xsd:string" | |
| }, | |
| "SIO": { | |
| "@id": "http://semanticscience.org/resource/", | |
| "@type": "@id" | |
| }, | |
| "subject": { | |
| "@id": "dcterms:subject", | |
| "@type": "@id" | |
| }, | |
| "void": { | |
| "@id": "http://rdfs.org/ns/void#", | |
| "@type": "@id" | |
| }, | |
| "xsd": { | |
| "@id": "http://www.w3.org/2001/XMLSchema#", | |
| "@type": "@id" | |
| }, | |
| "xref": { | |
| "@id": "biopax:xref", | |
| "@type": "@id" | |
| }, | |
| "webPage": { | |
| "@id": "foaf:page", | |
| "@type": "@id" | |
| } | |
| }, | |
| "_displayName": "Ensembl C. elegans", | |
| "bridgeDbSystemCode": "EnCe", | |
| "webPage": "http://www.ensembl.org", | |
| "_iriPattern": "http://www.ensembl.org/Caenorhabditis_elegans/Gene/Summary?g=$id", | |
| "exampleIdentifier": "Y42H9B.1", | |
| "bridgeDbType": "gene", | |
| "organism": "Caenorhabditis elegans", | |
| "isPrimary": true, | |
| "_standardName": "Ensembl", | |
| "name": ["Ensembl C. elegans", "Ensembl"], | |
| "uriRegexPattern": "http://www.ensembl.org/Caenorhabditis_elegans/Gene/Summary?g=(.*)", | |
| "owl:sameAs": ["http://www.ensembl.org/Caenorhabditis_elegans/Gene/Summary?g="], | |
| "@type": "Dataset", | |
| "subject": ["gpml:GeneProduct", "biopax:DnaReference"], | |
| "alternatePrefix": ["EnCe"] | |
| }, { | |
| "@context": { | |
| "@vocab": "http://www.example.org/bridgedb/input-vocab/", | |
| "alternatePrefix": { | |
| "@id": "idot:alternatePrefix", | |
| "@type": "xsd:string" | |
| }, | |
| "baseIri": "@base", | |
| "biopax": { | |
| "@id": "http://www.biopax.org/release/biopax-level3.owl#", | |
| "@type": "@id" | |
| }, | |
| "bridgeDbInput": { | |
| "@id": "http://www.example.org/bridgedb/input-vocab/", | |
| "@type": "@id" | |
| }, | |
| "Dataset": { | |
| "@id": "void:Dataset", | |
| "@type": "@id" | |
| }, | |
| "db": { | |
| "@id": "biopax:db", | |
| "@container": "@set", | |
| "@type": "xsd:string" | |
| }, | |
| "dcterms": { | |
| "@id": "http://purl.org/dc/terms/", | |
| "@type": "@id" | |
| }, | |
| "EntityReference": { | |
| "@id": "biopax:EntityReference", | |
| "@type": "@id" | |
| }, | |
| "exampleIdentifier": { | |
| "@id": "idot:exampleIdentifier", | |
| "@type": "xsd:string" | |
| }, | |
| "exampleResource": { | |
| "@id": "void:exampleResource", | |
| "@type": "@id" | |
| }, | |
| "foaf": { | |
| "@id": "http://xmlns.com/foaf/0.1/", | |
| "@type": "@id" | |
| }, | |
| "gpml": { | |
| "@id": "http://vocabularies.wikipathways.org/gpml#", | |
| "@type": "@id" | |
| }, | |
| "identifier": { | |
| "@id": "biopax:id", | |
| "@type": "xsd:string" | |
| }, | |
| "identifierPattern": { | |
| "@id": "idot:identifierPattern", | |
| "@type": "xsd:string" | |
| }, | |
| "idot": { | |
| "@id": "http://identifiers.org/idot/", | |
| "@type": "@id" | |
| }, | |
| "isDataItemIn": { | |
| "@id": "SIO:SIO_001278", | |
| "@type": "@id" | |
| }, | |
| "schema": { | |
| "@id": "http://schema.org/", | |
| "@type": "@id" | |
| }, | |
| "name": { | |
| "@id": "schema:name", | |
| "@type": "xsd:string" | |
| }, | |
| "organism": { | |
| "@id": "biopax:organism", | |
| "@type": "@id" | |
| }, | |
| "owl": { | |
| "@id": "http://www.w3.org/2002/07/owl#", | |
| "@type": "@id" | |
| }, | |
| "preferredPrefix": { | |
| "@id": "idot:preferredPrefix", | |
| "@type": "xsd:string" | |
| }, | |
| "SIO": { | |
| "@id": "http://semanticscience.org/resource/", | |
| "@type": "@id" | |
| }, | |
| "subject": { | |
| "@id": "dcterms:subject", | |
| "@type": "@id" | |
| }, | |
| "void": { | |
| "@id": "http://rdfs.org/ns/void#", | |
| "@type": "@id" | |
| }, | |
| "xsd": { | |
| "@id": "http://www.w3.org/2001/XMLSchema#", | |
| "@type": "@id" | |
| }, | |
| "xref": { | |
| "@id": "biopax:xref", | |
| "@type": "@id" | |
| }, | |
| "webPage": { | |
| "@id": "foaf:page", | |
| "@type": "@id" | |
| } | |
| }, | |
| "_displayName": "Ensembl Chicken", | |
| "bridgeDbSystemCode": "EnGg", | |
| "webPage": "http://www.ensembl.org", | |
| "_iriPattern": "http://www.ensembl.org/Gallus_gallus/Gene/Summary?g=$id", | |
| "exampleIdentifier": "ENSGALG00000021736", | |
| "bridgeDbType": "gene", | |
| "organism": "Gallus gallus", | |
| "isPrimary": true, | |
| "identifierPattern": "ENSGALG\\d{11}", | |
| "_standardName": "Ensembl", | |
| "name": ["Ensembl Chicken", "Ensembl"], | |
| "uriRegexPattern": "http://www.ensembl.org/Gallus_gallus/Gene/Summary?g=(ENSGALG\\d{11})", | |
| "owl:sameAs": ["http://www.ensembl.org/Gallus_gallus/Gene/Summary?g="], | |
| "@type": "Dataset", | |
| "subject": ["gpml:GeneProduct", "biopax:DnaReference"], | |
| "alternatePrefix": ["EnGg"] | |
| }, { | |
| "@context": { | |
| "@vocab": "http://www.example.org/bridgedb/input-vocab/", | |
| "alternatePrefix": { | |
| "@id": "idot:alternatePrefix", | |
| "@type": "xsd:string" | |
| }, | |
| "baseIri": "@base", | |
| "biopax": { | |
| "@id": "http://www.biopax.org/release/biopax-level3.owl#", | |
| "@type": "@id" | |
| }, | |
| "bridgeDbInput": { | |
| "@id": "http://www.example.org/bridgedb/input-vocab/", | |
| "@type": "@id" | |
| }, | |
| "Dataset": { | |
| "@id": "void:Dataset", | |
| "@type": "@id" | |
| }, | |
| "db": { | |
| "@id": "biopax:db", | |
| "@container": "@set", | |
| "@type": "xsd:string" | |
| }, | |
| "dcterms": { | |
| "@id": "http://purl.org/dc/terms/", | |
| "@type": "@id" | |
| }, | |
| "EntityReference": { | |
| "@id": "biopax:EntityReference", | |
| "@type": "@id" | |
| }, | |
| "exampleIdentifier": { | |
| "@id": "idot:exampleIdentifier", | |
| "@type": "xsd:string" | |
| }, | |
| "exampleResource": { | |
| "@id": "void:exampleResource", | |
| "@type": "@id" | |
| }, | |
| "foaf": { | |
| "@id": "http://xmlns.com/foaf/0.1/", | |
| "@type": "@id" | |
| }, | |
| "gpml": { | |
| "@id": "http://vocabularies.wikipathways.org/gpml#", | |
| "@type": "@id" | |
| }, | |
| "identifier": { | |
| "@id": "biopax:id", | |
| "@type": "xsd:string" | |
| }, | |
| "identifierPattern": { | |
| "@id": "idot:identifierPattern", | |
| "@type": "xsd:string" | |
| }, | |
| "idot": { | |
| "@id": "http://identifiers.org/idot/", | |
| "@type": "@id" | |
| }, | |
| "isDataItemIn": { | |
| "@id": "SIO:SIO_001278", | |
| "@type": "@id" | |
| }, | |
| "schema": { | |
| "@id": "http://schema.org/", | |
| "@type": "@id" | |
| }, | |
| "name": { | |
| "@id": "schema:name", | |
| "@type": "xsd:string" | |
| }, | |
| "organism": { | |
| "@id": "biopax:organism", | |
| "@type": "@id" | |
| }, | |
| "owl": { | |
| "@id": "http://www.w3.org/2002/07/owl#", | |
| "@type": "@id" | |
| }, | |
| "preferredPrefix": { | |
| "@id": "idot:preferredPrefix", | |
| "@type": "xsd:string" | |
| }, | |
| "SIO": { | |
| "@id": "http://semanticscience.org/resource/", | |
| "@type": "@id" | |
| }, | |
| "subject": { | |
| "@id": "dcterms:subject", | |
| "@type": "@id" | |
| }, | |
| "void": { | |
| "@id": "http://rdfs.org/ns/void#", | |
| "@type": "@id" | |
| }, | |
| "xsd": { | |
| "@id": "http://www.w3.org/2001/XMLSchema#", | |
| "@type": "@id" | |
| }, | |
| "xref": { | |
| "@id": "biopax:xref", | |
| "@type": "@id" | |
| }, | |
| "webPage": { | |
| "@id": "foaf:page", | |
| "@type": "@id" | |
| } | |
| }, | |
| "_displayName": "Ensembl Chimp", | |
| "bridgeDbSystemCode": "EnPt", | |
| "webPage": "http://www.ensembl.org", | |
| "_iriPattern": "http://www.ensembl.org/Pan_troglodytes/Gene/Summary?g=$id", | |
| "exampleIdentifier": "ENSPTRG00000036034", | |
| "bridgeDbType": "gene", | |
| "organism": "Pan troglodytes", | |
| "isPrimary": true, | |
| "identifierPattern": "ENSPTRG\\d{11}", | |
| "_standardName": "Ensembl", | |
| "name": ["Ensembl Chimp", "Ensembl"], | |
| "uriRegexPattern": "http://www.ensembl.org/Pan_troglodytes/Gene/Summary?g=(ENSPTRG\\d{11})", | |
| "owl:sameAs": ["http://www.ensembl.org/Pan_troglodytes/Gene/Summary?g="], | |
| "@type": "Dataset", | |
| "subject": ["gpml:GeneProduct", "biopax:DnaReference"], | |
| "alternatePrefix": ["EnPt"] | |
| }, { | |
| "@context": { | |
| "@vocab": "http://www.example.org/bridgedb/input-vocab/", | |
| "alternatePrefix": { | |
| "@id": "idot:alternatePrefix", | |
| "@type": "xsd:string" | |
| }, | |
| "baseIri": "@base", | |
| "biopax": { | |
| "@id": "http://www.biopax.org/release/biopax-level3.owl#", | |
| "@type": "@id" | |
| }, | |
| "bridgeDbInput": { | |
| "@id": "http://www.example.org/bridgedb/input-vocab/", | |
| "@type": "@id" | |
| }, | |
| "Dataset": { | |
| "@id": "void:Dataset", | |
| "@type": "@id" | |
| }, | |
| "db": { | |
| "@id": "biopax:db", | |
| "@container": "@set", | |
| "@type": "xsd:string" | |
| }, | |
| "dcterms": { | |
| "@id": "http://purl.org/dc/terms/", | |
| "@type": "@id" | |
| }, | |
| "EntityReference": { | |
| "@id": "biopax:EntityReference", | |
| "@type": "@id" | |
| }, | |
| "exampleIdentifier": { | |
| "@id": "idot:exampleIdentifier", | |
| "@type": "xsd:string" | |
| }, | |
| "exampleResource": { | |
| "@id": "void:exampleResource", | |
| "@type": "@id" | |
| }, | |
| "foaf": { | |
| "@id": "http://xmlns.com/foaf/0.1/", | |
| "@type": "@id" | |
| }, | |
| "gpml": { | |
| "@id": "http://vocabularies.wikipathways.org/gpml#", | |
| "@type": "@id" | |
| }, | |
| "identifier": { | |
| "@id": "biopax:id", | |
| "@type": "xsd:string" | |
| }, | |
| "identifierPattern": { | |
| "@id": "idot:identifierPattern", | |
| "@type": "xsd:string" | |
| }, | |
| "idot": { | |
| "@id": "http://identifiers.org/idot/", | |
| "@type": "@id" | |
| }, | |
| "isDataItemIn": { | |
| "@id": "SIO:SIO_001278", | |
| "@type": "@id" | |
| }, | |
| "schema": { | |
| "@id": "http://schema.org/", | |
| "@type": "@id" | |
| }, | |
| "name": { | |
| "@id": "schema:name", | |
| "@type": "xsd:string" | |
| }, | |
| "organism": { | |
| "@id": "biopax:organism", | |
| "@type": "@id" | |
| }, | |
| "owl": { | |
| "@id": "http://www.w3.org/2002/07/owl#", | |
| "@type": "@id" | |
| }, | |
| "preferredPrefix": { | |
| "@id": "idot:preferredPrefix", | |
| "@type": "xsd:string" | |
| }, | |
| "SIO": { | |
| "@id": "http://semanticscience.org/resource/", | |
| "@type": "@id" | |
| }, | |
| "subject": { | |
| "@id": "dcterms:subject", | |
| "@type": "@id" | |
| }, | |
| "void": { | |
| "@id": "http://rdfs.org/ns/void#", | |
| "@type": "@id" | |
| }, | |
| "xsd": { | |
| "@id": "http://www.w3.org/2001/XMLSchema#", | |
| "@type": "@id" | |
| }, | |
| "xref": { | |
| "@id": "biopax:xref", | |
| "@type": "@id" | |
| }, | |
| "webPage": { | |
| "@id": "foaf:page", | |
| "@type": "@id" | |
| } | |
| }, | |
| "_displayName": "Ensembl Cow", | |
| "bridgeDbSystemCode": "EnBt", | |
| "webPage": "http://www.ensembl.org", | |
| "_iriPattern": "http://www.ensembl.org/Bos_taurus/Gene/Summary?g=$id", | |
| "exampleIdentifier": "ENSBTAG00000043548", | |
| "bridgeDbType": "gene", | |
| "organism": "Bos taurus", | |
| "isPrimary": true, | |
| "identifierPattern": "ENSBTAG\\d{11}", | |
| "_standardName": "Ensembl", | |
| "name": ["Ensembl Cow", "Ensembl"], | |
| "uriRegexPattern": "http://www.ensembl.org/Bos_taurus/Gene/Summary?g=(ENSBTAG\\d{11})", | |
| "owl:sameAs": ["http://www.ensembl.org/Bos_taurus/Gene/Summary?g="], | |
| "@type": "Dataset", | |
| "subject": ["gpml:GeneProduct", "biopax:DnaReference"], | |
| "alternatePrefix": ["EnBt"] | |
| }, { | |
| "@context": { | |
| "@vocab": "http://www.example.org/bridgedb/input-vocab/", | |
| "alternatePrefix": { | |
| "@id": "idot:alternatePrefix", | |
| "@type": "xsd:string" | |
| }, | |
| "baseIri": "@base", | |
| "biopax": { | |
| "@id": "http://www.biopax.org/release/biopax-level3.owl#", | |
| "@type": "@id" | |
| }, | |
| "bridgeDbInput": { | |
| "@id": "http://www.example.org/bridgedb/input-vocab/", | |
| "@type": "@id" | |
| }, | |
| "Dataset": { | |
| "@id": "void:Dataset", | |
| "@type": "@id" | |
| }, | |
| "db": { | |
| "@id": "biopax:db", | |
| "@container": "@set", | |
| "@type": "xsd:string" | |
| }, | |
| "dcterms": { | |
| "@id": "http://purl.org/dc/terms/", | |
| "@type": "@id" | |
| }, | |
| "EntityReference": { | |
| "@id": "biopax:EntityReference", | |
| "@type": "@id" | |
| }, | |
| "exampleIdentifier": { | |
| "@id": "idot:exampleIdentifier", | |
| "@type": "xsd:string" | |
| }, | |
| "exampleResource": { | |
| "@id": "void:exampleResource", | |
| "@type": "@id" | |
| }, | |
| "foaf": { | |
| "@id": "http://xmlns.com/foaf/0.1/", | |
| "@type": "@id" | |
| }, | |
| "gpml": { | |
| "@id": "http://vocabularies.wikipathways.org/gpml#", | |
| "@type": "@id" | |
| }, | |
| "identifier": { | |
| "@id": "biopax:id", | |
| "@type": "xsd:string" | |
| }, | |
| "identifierPattern": { | |
| "@id": "idot:identifierPattern", | |
| "@type": "xsd:string" | |
| }, | |
| "idot": { | |
| "@id": "http://identifiers.org/idot/", | |
| "@type": "@id" | |
| }, | |
| "isDataItemIn": { | |
| "@id": "SIO:SIO_001278", | |
| "@type": "@id" | |
| }, | |
| "schema": { | |
| "@id": "http://schema.org/", | |
| "@type": "@id" | |
| }, | |
| "name": { | |
| "@id": "schema:name", | |
| "@type": "xsd:string" | |
| }, | |
| "organism": { | |
| "@id": "biopax:organism", | |
| "@type": "@id" | |
| }, | |
| "owl": { | |
| "@id": "http://www.w3.org/2002/07/owl#", | |
| "@type": "@id" | |
| }, | |
| "preferredPrefix": { | |
| "@id": "idot:preferredPrefix", | |
| "@type": "xsd:string" | |
| }, | |
| "SIO": { | |
| "@id": "http://semanticscience.org/resource/", | |
| "@type": "@id" | |
| }, | |
| "subject": { | |
| "@id": "dcterms:subject", | |
| "@type": "@id" | |
| }, | |
| "void": { | |
| "@id": "http://rdfs.org/ns/void#", | |
| "@type": "@id" | |
| }, | |
| "xsd": { | |
| "@id": "http://www.w3.org/2001/XMLSchema#", | |
| "@type": "@id" | |
| }, | |
| "xref": { | |
| "@id": "biopax:xref", | |
| "@type": "@id" | |
| }, | |
| "webPage": { | |
| "@id": "foaf:page", | |
| "@type": "@id" | |
| } | |
| }, | |
| "_displayName": "Ensembl Dog", | |
| "bridgeDbSystemCode": "EnCf", | |
| "webPage": "http://www.ensembl.org", | |
| "_iriPattern": "http://www.ensembl.org/Canis_familiaris/Gene/Summary?g=$id", | |
| "exampleIdentifier": "ENSCAFG00000025860", | |
| "bridgeDbType": "gene", | |
| "organism": "Canis familiaris", | |
| "isPrimary": true, | |
| "identifierPattern": "ENSCAFG\\d{11}", | |
| "_standardName": "Ensembl", | |
| "name": ["Ensembl Dog", "Ensembl"], | |
| "uriRegexPattern": "http://www.ensembl.org/Canis_familiaris/Gene/Summary?g=(ENSCAFG\\d{11})", | |
| "owl:sameAs": ["http://www.ensembl.org/Canis_familiaris/Gene/Summary?g="], | |
| "@type": "Dataset", | |
| "subject": ["gpml:GeneProduct", "biopax:DnaReference"], | |
| "alternatePrefix": ["EnCf"] | |
| }, { | |
| "@context": { | |
| "@vocab": "http://www.example.org/bridgedb/input-vocab/", | |
| "alternatePrefix": { | |
| "@id": "idot:alternatePrefix", | |
| "@type": "xsd:string" | |
| }, | |
| "baseIri": "@base", | |
| "biopax": { | |
| "@id": "http://www.biopax.org/release/biopax-level3.owl#", | |
| "@type": "@id" | |
| }, | |
| "bridgeDbInput": { | |
| "@id": "http://www.example.org/bridgedb/input-vocab/", | |
| "@type": "@id" | |
| }, | |
| "Dataset": { | |
| "@id": "void:Dataset", | |
| "@type": "@id" | |
| }, | |
| "db": { | |
| "@id": "biopax:db", | |
| "@container": "@set", | |
| "@type": "xsd:string" | |
| }, | |
| "dcterms": { | |
| "@id": "http://purl.org/dc/terms/", | |
| "@type": "@id" | |
| }, | |
| "EntityReference": { | |
| "@id": "biopax:EntityReference", | |
| "@type": "@id" | |
| }, | |
| "exampleIdentifier": { | |
| "@id": "idot:exampleIdentifier", | |
| "@type": "xsd:string" | |
| }, | |
| "exampleResource": { | |
| "@id": "void:exampleResource", | |
| "@type": "@id" | |
| }, | |
| "foaf": { | |
| "@id": "http://xmlns.com/foaf/0.1/", | |
| "@type": "@id" | |
| }, | |
| "gpml": { | |
| "@id": "http://vocabularies.wikipathways.org/gpml#", | |
| "@type": "@id" | |
| }, | |
| "identifier": { | |
| "@id": "biopax:id", | |
| "@type": "xsd:string" | |
| }, | |
| "identifierPattern": { | |
| "@id": "idot:identifierPattern", | |
| "@type": "xsd:string" | |
| }, | |
| "idot": { | |
| "@id": "http://identifiers.org/idot/", | |
| "@type": "@id" | |
| }, | |
| "isDataItemIn": { | |
| "@id": "SIO:SIO_001278", | |
| "@type": "@id" | |
| }, | |
| "schema": { | |
| "@id": "http://schema.org/", | |
| "@type": "@id" | |
| }, | |
| "name": { | |
| "@id": "schema:name", | |
| "@type": "xsd:string" | |
| }, | |
| "organism": { | |
| "@id": "biopax:organism", | |
| "@type": "@id" | |
| }, | |
| "owl": { | |
| "@id": "http://www.w3.org/2002/07/owl#", | |
| "@type": "@id" | |
| }, | |
| "preferredPrefix": { | |
| "@id": "idot:preferredPrefix", | |
| "@type": "xsd:string" | |
| }, | |
| "SIO": { | |
| "@id": "http://semanticscience.org/resource/", | |
| "@type": "@id" | |
| }, | |
| "subject": { | |
| "@id": "dcterms:subject", | |
| "@type": "@id" | |
| }, | |
| "void": { | |
| "@id": "http://rdfs.org/ns/void#", | |
| "@type": "@id" | |
| }, | |
| "xsd": { | |
| "@id": "http://www.w3.org/2001/XMLSchema#", | |
| "@type": "@id" | |
| }, | |
| "xref": { | |
| "@id": "biopax:xref", | |
| "@type": "@id" | |
| }, | |
| "webPage": { | |
| "@id": "foaf:page", | |
| "@type": "@id" | |
| } | |
| }, | |
| "_displayName": "Ensembl E. coli", | |
| "bridgeDbSystemCode": "EnEc", | |
| "webPage": "http://www.ensembl.org", | |
| "_iriPattern": "http://bacteria.ensembl.org/Escherichia_Shigella/E_coli_K12/Gene/Summary?g=$id", | |
| "exampleIdentifier": "EBESCG00000000010", | |
| "bridgeDbType": "gene", | |
| "organism": "Escherichia coli", | |
| "isPrimary": true, | |
| "identifierPattern": "EBESCG\\d{11}", | |
| "_standardName": "Ensembl", | |
| "name": ["Ensembl E. coli", "Ensembl"], | |
| "uriRegexPattern": "http://bacteria.ensembl.org/Escherichia_Shigella/E_coli_K12/Gene/Summary?g=(EBESCG\\d{11})", | |
| "owl:sameAs": ["http://bacteria.ensembl.org/Escherichia_Shigella/E_coli_K12/Gene/Summary?g="], | |
| "@type": "Dataset", | |
| "subject": ["gpml:GeneProduct", "biopax:DnaReference"], | |
| "alternatePrefix": ["EnEc"] | |
| }, { | |
| "@context": { | |
| "@vocab": "http://www.example.org/bridgedb/input-vocab/", | |
| "alternatePrefix": { | |
| "@id": "idot:alternatePrefix", | |
| "@type": "xsd:string" | |
| }, | |
| "baseIri": "@base", | |
| "biopax": { | |
| "@id": "http://www.biopax.org/release/biopax-level3.owl#", | |
| "@type": "@id" | |
| }, | |
| "bridgeDbInput": { | |
| "@id": "http://www.example.org/bridgedb/input-vocab/", | |
| "@type": "@id" | |
| }, | |
| "Dataset": { | |
| "@id": "void:Dataset", | |
| "@type": "@id" | |
| }, | |
| "db": { | |
| "@id": "biopax:db", | |
| "@container": "@set", | |
| "@type": "xsd:string" | |
| }, | |
| "dcterms": { | |
| "@id": "http://purl.org/dc/terms/", | |
| "@type": "@id" | |
| }, | |
| "EntityReference": { | |
| "@id": "biopax:EntityReference", | |
| "@type": "@id" | |
| }, | |
| "exampleIdentifier": { | |
| "@id": "idot:exampleIdentifier", | |
| "@type": "xsd:string" | |
| }, | |
| "exampleResource": { | |
| "@id": "void:exampleResource", | |
| "@type": "@id" | |
| }, | |
| "foaf": { | |
| "@id": "http://xmlns.com/foaf/0.1/", | |
| "@type": "@id" | |
| }, | |
| "gpml": { | |
| "@id": "http://vocabularies.wikipathways.org/gpml#", | |
| "@type": "@id" | |
| }, | |
| "identifier": { | |
| "@id": "biopax:id", | |
| "@type": "xsd:string" | |
| }, | |
| "identifierPattern": { | |
| "@id": "idot:identifierPattern", | |
| "@type": "xsd:string" | |
| }, | |
| "idot": { | |
| "@id": "http://identifiers.org/idot/", | |
| "@type": "@id" | |
| }, | |
| "isDataItemIn": { | |
| "@id": "SIO:SIO_001278", | |
| "@type": "@id" | |
| }, | |
| "schema": { | |
| "@id": "http://schema.org/", | |
| "@type": "@id" | |
| }, | |
| "name": { | |
| "@id": "schema:name", | |
| "@type": "xsd:string" | |
| }, | |
| "organism": { | |
| "@id": "biopax:organism", | |
| "@type": "@id" | |
| }, | |
| "owl": { | |
| "@id": "http://www.w3.org/2002/07/owl#", | |
| "@type": "@id" | |
| }, | |
| "preferredPrefix": { | |
| "@id": "idot:preferredPrefix", | |
| "@type": "xsd:string" | |
| }, | |
| "SIO": { | |
| "@id": "http://semanticscience.org/resource/", | |
| "@type": "@id" | |
| }, | |
| "subject": { | |
| "@id": "dcterms:subject", | |
| "@type": "@id" | |
| }, | |
| "void": { | |
| "@id": "http://rdfs.org/ns/void#", | |
| "@type": "@id" | |
| }, | |
| "xsd": { | |
| "@id": "http://www.w3.org/2001/XMLSchema#", | |
| "@type": "@id" | |
| }, | |
| "xref": { | |
| "@id": "biopax:xref", | |
| "@type": "@id" | |
| }, | |
| "webPage": { | |
| "@id": "foaf:page", | |
| "@type": "@id" | |
| } | |
| }, | |
| "_displayName": "Ensembl Fruitfly", | |
| "bridgeDbSystemCode": "EnDm", | |
| "webPage": "http://www.ensembl.org", | |
| "_iriPattern": "http://www.ensembl.org/Drosophila_melanogaster/Gene/Summary?g=$id", | |
| "exampleIdentifier": "FBgn0032956", | |
| "bridgeDbType": "gene", | |
| "organism": "Drosophila melanogaster", | |
| "isPrimary": true, | |
| "identifierPattern": "FBgn\\d{7}", | |
| "_standardName": "Ensembl", | |
| "name": ["Ensembl Fruitfly", "Ensembl"], | |
| "uriRegexPattern": "http://www.ensembl.org/Drosophila_melanogaster/Gene/Summary?g=(FBgn\\d{7})", | |
| "owl:sameAs": ["http://www.ensembl.org/Drosophila_melanogaster/Gene/Summary?g="], | |
| "@type": "Dataset", | |
| "subject": ["gpml:GeneProduct", "biopax:DnaReference"], | |
| "alternatePrefix": ["EnDm"] | |
| }, { | |
| "@context": { | |
| "@vocab": "http://www.example.org/bridgedb/input-vocab/", | |
| "alternatePrefix": { | |
| "@id": "idot:alternatePrefix", | |
| "@type": "xsd:string" | |
| }, | |
| "baseIri": "@base", | |
| "biopax": { | |
| "@id": "http://www.biopax.org/release/biopax-level3.owl#", | |
| "@type": "@id" | |
| }, | |
| "bridgeDbInput": { | |
| "@id": "http://www.example.org/bridgedb/input-vocab/", | |
| "@type": "@id" | |
| }, | |
| "Dataset": { | |
| "@id": "void:Dataset", | |
| "@type": "@id" | |
| }, | |
| "db": { | |
| "@id": "biopax:db", | |
| "@container": "@set", | |
| "@type": "xsd:string" | |
| }, | |
| "dcterms": { | |
| "@id": "http://purl.org/dc/terms/", | |
| "@type": "@id" | |
| }, | |
| "EntityReference": { | |
| "@id": "biopax:EntityReference", | |
| "@type": "@id" | |
| }, | |
| "exampleIdentifier": { | |
| "@id": "idot:exampleIdentifier", | |
| "@type": "xsd:string" | |
| }, | |
| "exampleResource": { | |
| "@id": "void:exampleResource", | |
| "@type": "@id" | |
| }, | |
| "foaf": { | |
| "@id": "http://xmlns.com/foaf/0.1/", | |
| "@type": "@id" | |
| }, | |
| "gpml": { | |
| "@id": "http://vocabularies.wikipathways.org/gpml#", | |
| "@type": "@id" | |
| }, | |
| "identifier": { | |
| "@id": "biopax:id", | |
| "@type": "xsd:string" | |
| }, | |
| "identifierPattern": { | |
| "@id": "idot:identifierPattern", | |
| "@type": "xsd:string" | |
| }, | |
| "idot": { | |
| "@id": "http://identifiers.org/idot/", | |
| "@type": "@id" | |
| }, | |
| "isDataItemIn": { | |
| "@id": "SIO:SIO_001278", | |
| "@type": "@id" | |
| }, | |
| "schema": { | |
| "@id": "http://schema.org/", | |
| "@type": "@id" | |
| }, | |
| "name": { | |
| "@id": "schema:name", | |
| "@type": "xsd:string" | |
| }, | |
| "organism": { | |
| "@id": "biopax:organism", | |
| "@type": "@id" | |
| }, | |
| "owl": { | |
| "@id": "http://www.w3.org/2002/07/owl#", | |
| "@type": "@id" | |
| }, | |
| "preferredPrefix": { | |
| "@id": "idot:preferredPrefix", | |
| "@type": "xsd:string" | |
| }, | |
| "SIO": { | |
| "@id": "http://semanticscience.org/resource/", | |
| "@type": "@id" | |
| }, | |
| "subject": { | |
| "@id": "dcterms:subject", | |
| "@type": "@id" | |
| }, | |
| "void": { | |
| "@id": "http://rdfs.org/ns/void#", | |
| "@type": "@id" | |
| }, | |
| "xsd": { | |
| "@id": "http://www.w3.org/2001/XMLSchema#", | |
| "@type": "@id" | |
| }, | |
| "xref": { | |
| "@id": "biopax:xref", | |
| "@type": "@id" | |
| }, | |
| "webPage": { | |
| "@id": "foaf:page", | |
| "@type": "@id" | |
| } | |
| }, | |
| "_displayName": "Ensembl Horse", | |
| "bridgeDbSystemCode": "EnQc", | |
| "webPage": "http://www.ensembl.org", | |
| "_iriPattern": "http://www.ensembl.org/Equus_caballus/Gene/Summary?g=$id", | |
| "exampleIdentifier": "ENSECAG00000026160", | |
| "bridgeDbType": "gene", | |
| "organism": "Equus caballus", | |
| "isPrimary": true, | |
| "identifierPattern": "ENSECAG\\d{11}", | |
| "_standardName": "Ensembl", | |
| "name": ["Ensembl Horse", "Ensembl"], | |
| "uriRegexPattern": "http://www.ensembl.org/Equus_caballus/Gene/Summary?g=(ENSECAG\\d{11})", | |
| "owl:sameAs": ["http://www.ensembl.org/Equus_caballus/Gene/Summary?g="], | |
| "@type": "Dataset", | |
| "subject": ["gpml:GeneProduct", "biopax:DnaReference"], | |
| "alternatePrefix": ["EnQc"] | |
| }, { | |
| "@context": { | |
| "@vocab": "http://www.example.org/bridgedb/input-vocab/", | |
| "alternatePrefix": { | |
| "@id": "idot:alternatePrefix", | |
| "@type": "xsd:string" | |
| }, | |
| "baseIri": "@base", | |
| "biopax": { | |
| "@id": "http://www.biopax.org/release/biopax-level3.owl#", | |
| "@type": "@id" | |
| }, | |
| "bridgeDbInput": { | |
| "@id": "http://www.example.org/bridgedb/input-vocab/", | |
| "@type": "@id" | |
| }, | |
| "Dataset": { | |
| "@id": "void:Dataset", | |
| "@type": "@id" | |
| }, | |
| "db": { | |
| "@id": "biopax:db", | |
| "@container": "@set", | |
| "@type": "xsd:string" | |
| }, | |
| "dcterms": { | |
| "@id": "http://purl.org/dc/terms/", | |
| "@type": "@id" | |
| }, | |
| "EntityReference": { | |
| "@id": "biopax:EntityReference", | |
| "@type": "@id" | |
| }, | |
| "exampleIdentifier": { | |
| "@id": "idot:exampleIdentifier", | |
| "@type": "xsd:string" | |
| }, | |
| "exampleResource": { | |
| "@id": "void:exampleResource", | |
| "@type": "@id" | |
| }, | |
| "foaf": { | |
| "@id": "http://xmlns.com/foaf/0.1/", | |
| "@type": "@id" | |
| }, | |
| "gpml": { | |
| "@id": "http://vocabularies.wikipathways.org/gpml#", | |
| "@type": "@id" | |
| }, | |
| "identifier": { | |
| "@id": "biopax:id", | |
| "@type": "xsd:string" | |
| }, | |
| "identifierPattern": { | |
| "@id": "idot:identifierPattern", | |
| "@type": "xsd:string" | |
| }, | |
| "idot": { | |
| "@id": "http://identifiers.org/idot/", | |
| "@type": "@id" | |
| }, | |
| "isDataItemIn": { | |
| "@id": "SIO:SIO_001278", | |
| "@type": "@id" | |
| }, | |
| "schema": { | |
| "@id": "http://schema.org/", | |
| "@type": "@id" | |
| }, | |
| "name": { | |
| "@id": "schema:name", | |
| "@type": "xsd:string" | |
| }, | |
| "organism": { | |
| "@id": "biopax:organism", | |
| "@type": "@id" | |
| }, | |
| "owl": { | |
| "@id": "http://www.w3.org/2002/07/owl#", | |
| "@type": "@id" | |
| }, | |
| "preferredPrefix": { | |
| "@id": "idot:preferredPrefix", | |
| "@type": "xsd:string" | |
| }, | |
| "SIO": { | |
| "@id": "http://semanticscience.org/resource/", | |
| "@type": "@id" | |
| }, | |
| "subject": { | |
| "@id": "dcterms:subject", | |
| "@type": "@id" | |
| }, | |
| "void": { | |
| "@id": "http://rdfs.org/ns/void#", | |
| "@type": "@id" | |
| }, | |
| "xsd": { | |
| "@id": "http://www.w3.org/2001/XMLSchema#", | |
| "@type": "@id" | |
| }, | |
| "xref": { | |
| "@id": "biopax:xref", | |
| "@type": "@id" | |
| }, | |
| "webPage": { | |
| "@id": "foaf:page", | |
| "@type": "@id" | |
| } | |
| }, | |
| "_displayName": "Ensembl Human", | |
| "bridgeDbSystemCode": "EnHs", | |
| "webPage": "http://www.ensembl.org", | |
| "_iriPattern": "http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=$id", | |
| "exampleIdentifier": "ENSG00000139618", | |
| "bridgeDbType": "gene", | |
| "organism": "Homo sapiens", | |
| "isPrimary": true, | |
| "identifierPattern": "ENSG\\d{11}", | |
| "_standardName": "Ensembl", | |
| "name": ["Ensembl Human", "Ensembl"], | |
| "uriRegexPattern": "http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=(ENSG\\d{11})", | |
| "owl:sameAs": ["http://www.ensembl.org/Homo_sapiens/Gene/Summary?g="], | |
| "@type": "Dataset", | |
| "subject": ["gpml:GeneProduct", "biopax:DnaReference"], | |
| "alternatePrefix": ["EnHs"] | |
| }, { | |
| "@context": { | |
| "@vocab": "http://www.example.org/bridgedb/input-vocab/", | |
| "alternatePrefix": { | |
| "@id": "idot:alternatePrefix", | |
| "@type": "xsd:string" | |
| }, | |
| "baseIri": "@base", | |
| "biopax": { | |
| "@id": "http://www.biopax.org/release/biopax-level3.owl#", | |
| "@type": "@id" | |
| }, | |
| "bridgeDbInput": { | |
| "@id": "http://www.example.org/bridgedb/input-vocab/", | |
| "@type": "@id" | |
| }, | |
| "Dataset": { | |
| "@id": "void:Dataset", | |
| "@type": "@id" | |
| }, | |
| "db": { | |
| "@id": "biopax:db", | |
| "@container": "@set", | |
| "@type": "xsd:string" | |
| }, | |
| "dcterms": { | |
| "@id": "http://purl.org/dc/terms/", | |
| "@type": "@id" | |
| }, | |
| "EntityReference": { | |
| "@id": "biopax:EntityReference", | |
| "@type": "@id" | |
| }, | |
| "exampleIdentifier": { | |
| "@id": "idot:exampleIdentifier", | |
| "@type": "xsd:string" | |
| }, | |
| "exampleResource": { | |
| "@id": "void:exampleResource", | |
| "@type": "@id" | |
| }, | |
| "foaf": { | |
| "@id": "http://xmlns.com/foaf/0.1/", | |
| "@type": "@id" | |
| }, | |
| "gpml": { | |
| "@id": "http://vocabularies.wikipathways.org/gpml#", | |
| "@type": "@id" | |
| }, | |
| "identifier": { | |
| "@id": "biopax:id", | |
| "@type": "xsd:string" | |
| }, | |
| "identifierPattern": { | |
| "@id": "idot:identifierPattern", | |
| "@type": "xsd:string" | |
| }, | |
| "idot": { | |
| "@id": "http://identifiers.org/idot/", | |
| "@type": "@id" | |
| }, | |
| "isDataItemIn": { | |
| "@id": "SIO:SIO_001278", | |
| "@type": "@id" | |
| }, | |
| "schema": { | |
| "@id": "http://schema.org/", | |
| "@type": "@id" | |
| }, | |
| "name": { | |
| "@id": "schema:name", | |
| "@type": "xsd:string" | |
| }, | |
| "organism": { | |
| "@id": "biopax:organism", | |
| "@type": "@id" | |
| }, | |
| "owl": { | |
| "@id": "http://www.w3.org/2002/07/owl#", | |
| "@type": "@id" | |
| }, | |
| "preferredPrefix": { | |
| "@id": "idot:preferredPrefix", | |
| "@type": "xsd:string" | |
| }, | |
| "SIO": { | |
| "@id": "http://semanticscience.org/resource/", | |
| "@type": "@id" | |
| }, | |
| "subject": { | |
| "@id": "dcterms:subject", | |
| "@type": "@id" | |
| }, | |
| "void": { | |
| "@id": "http://rdfs.org/ns/void#", | |
| "@type": "@id" | |
| }, | |
| "xsd": { | |
| "@id": "http://www.w3.org/2001/XMLSchema#", | |
| "@type": "@id" | |
| }, | |
| "xref": { | |
| "@id": "biopax:xref", | |
| "@type": "@id" | |
| }, | |
| "webPage": { | |
| "@id": "foaf:page", | |
| "@type": "@id" | |
| } | |
| }, | |
| "_displayName": "Ensembl M. tuberculosis", | |
| "bridgeDbSystemCode": "EnMx", | |
| "webPage": "http://www.ensembl.org", | |
| "_iriPattern": "http://bacteria.ensembl.org/Mycobacterium/M_tuberculosis_H37Rv/Gene/Summary?g=$id", | |
| "exampleIdentifier": "EBMYCG00000003122", | |
| "bridgeDbType": "gene", | |
| "organism": "Mycobacterium tuberculosis", | |
| "isPrimary": true, | |
| "identifierPattern": "EBMYCG\\d{11}", | |
| "_standardName": "Ensembl", | |
| "name": ["Ensembl M. tuberculosis", "Ensembl"], | |
| "uriRegexPattern": "http://bacteria.ensembl.org/Mycobacterium/M_tuberculosis_H37Rv/Gene/Summary?g=(EBMYCG\\d{11})", | |
| "owl:sameAs": ["http://bacteria.ensembl.org/Mycobacterium/M_tuberculosis_H37Rv/Gene/Summary?g="], | |
| "@type": "Dataset", | |
| "subject": ["gpml:GeneProduct", "biopax:DnaReference"], | |
| "alternatePrefix": ["EnMx"] | |
| }, { | |
| "@context": { | |
| "@vocab": "http://www.example.org/bridgedb/input-vocab/", | |
| "alternatePrefix": { | |
| "@id": "idot:alternatePrefix", | |
| "@type": "xsd:string" | |
| }, | |
| "baseIri": "@base", | |
| "biopax": { | |
| "@id": "http://www.biopax.org/release/biopax-level3.owl#", | |
| "@type": "@id" | |
| }, | |
| "bridgeDbInput": { | |
| "@id": "http://www.example.org/bridgedb/input-vocab/", | |
| "@type": "@id" | |
| }, | |
| "Dataset": { | |
| "@id": "void:Dataset", | |
| "@type": "@id" | |
| }, | |
| "db": { | |
| "@id": "biopax:db", | |
| "@container": "@set", | |
| "@type": "xsd:string" | |
| }, | |
| "dcterms": { | |
| "@id": "http://purl.org/dc/terms/", | |
| "@type": "@id" | |
| }, | |
| "EntityReference": { | |
| "@id": "biopax:EntityReference", | |
| "@type": "@id" | |
| }, | |
| "exampleIdentifier": { | |
| "@id": "idot:exampleIdentifier", | |
| "@type": "xsd:string" | |
| }, | |
| "exampleResource": { | |
| "@id": "void:exampleResource", | |
| "@type": "@id" | |
| }, | |
| "foaf": { | |
| "@id": "http://xmlns.com/foaf/0.1/", | |
| "@type": "@id" | |
| }, | |
| "gpml": { | |
| "@id": "http://vocabularies.wikipathways.org/gpml#", | |
| "@type": "@id" | |
| }, | |
| "identifier": { | |
| "@id": "biopax:id", | |
| "@type": "xsd:string" | |
| }, | |
| "identifierPattern": { | |
| "@id": "idot:identifierPattern", | |
| "@type": "xsd:string" | |
| }, | |
| "idot": { | |
| "@id": "http://identifiers.org/idot/", | |
| "@type": "@id" | |
| }, | |
| "isDataItemIn": { | |
| "@id": "SIO:SIO_001278", | |
| "@type": "@id" | |
| }, | |
| "schema": { | |
| "@id": "http://schema.org/", | |
| "@type": "@id" | |
| }, | |
| "name": { | |
| "@id": "schema:name", | |
| "@type": "xsd:string" | |
| }, | |
| "organism": { | |
| "@id": "biopax:organism", | |
| "@type": "@id" | |
| }, | |
| "owl": { | |
| "@id": "http://www.w3.org/2002/07/owl#", | |
| "@type": "@id" | |
| }, | |
| "preferredPrefix": { | |
| "@id": "idot:preferredPrefix", | |
| "@type": "xsd:string" | |
| }, | |
| "SIO": { | |
| "@id": "http://semanticscience.org/resource/", | |
| "@type": "@id" | |
| }, | |
| "subject": { | |
| "@id": "dcterms:subject", | |
| "@type": "@id" | |
| }, | |
| "void": { | |
| "@id": "http://rdfs.org/ns/void#", | |
| "@type": "@id" | |
| }, | |
| "xsd": { | |
| "@id": "http://www.w3.org/2001/XMLSchema#", | |
| "@type": "@id" | |
| }, | |
| "xref": { | |
| "@id": "biopax:xref", | |
| "@type": "@id" | |
| }, | |
| "webPage": { | |
| "@id": "foaf:page", | |
| "@type": "@id" | |
| } | |
| }, | |
| "_displayName": "Ensembl Mosquito", | |
| "bridgeDbSystemCode": "EnAg", | |
| "webPage": "http://www.ensembl.org", | |
| "_iriPattern": "http://www.ensembl.org/Anopheles_gambiae/Gene/Summary?_q=$id", | |
| "exampleIdentifier": "AGAP006864", | |
| "bridgeDbType": "gene", | |
| "organism": "Anopheles gambiae", | |
| "isPrimary": true, | |
| "identifierPattern": "AGAP\\d{6}", | |
| "_standardName": "Ensembl", | |
| "name": ["Ensembl Mosquito", "Ensembl"], | |
| "uriRegexPattern": "http://www.ensembl.org/Anopheles_gambiae/Gene/Summary?_q=(AGAP\\d{6})", | |
| "owl:sameAs": ["http://www.ensembl.org/Anopheles_gambiae/Gene/Summary?_q="], | |
| "@type": "Dataset", | |
| "subject": ["gpml:GeneProduct", "biopax:DnaReference"], | |
| "alternatePrefix": ["EnAg"] | |
| }, { | |
| "@context": { | |
| "@vocab": "http://www.example.org/bridgedb/input-vocab/", | |
| "alternatePrefix": { | |
| "@id": "idot:alternatePrefix", | |
| "@type": "xsd:string" | |
| }, | |
| "baseIri": "@base", | |
| "biopax": { | |
| "@id": "http://www.biopax.org/release/biopax-level3.owl#", | |
| "@type": "@id" | |
| }, | |
| "bridgeDbInput": { | |
| "@id": "http://www.example.org/bridgedb/input-vocab/", | |
| "@type": "@id" | |
| }, | |
| "Dataset": { | |
| "@id": "void:Dataset", | |
| "@type": "@id" | |
| }, | |
| "db": { | |
| "@id": "biopax:db", | |
| "@container": "@set", | |
| "@type": "xsd:string" | |
| }, | |
| "dcterms": { | |
| "@id": "http://purl.org/dc/terms/", | |
| "@type": "@id" | |
| }, | |
| "EntityReference": { | |
| "@id": "biopax:EntityReference", | |
| "@type": "@id" | |
| }, | |
| "exampleIdentifier": { | |
| "@id": "idot:exampleIdentifier", | |
| "@type": "xsd:string" | |
| }, | |
| "exampleResource": { | |
| "@id": "void:exampleResource", | |
| "@type": "@id" | |
| }, | |
| "foaf": { | |
| "@id": "http://xmlns.com/foaf/0.1/", | |
| "@type": "@id" | |
| }, | |
| "gpml": { | |
| "@id": "http://vocabularies.wikipathways.org/gpml#", | |
| "@type": "@id" | |
| }, | |
| "identifier": { | |
| "@id": "biopax:id", | |
| "@type": "xsd:string" | |
| }, | |
| "identifierPattern": { | |
| "@id": "idot:identifierPattern", | |
| "@type": "xsd:string" | |
| }, | |
| "idot": { | |
| "@id": "http://identifiers.org/idot/", | |
| "@type": "@id" | |
| }, | |
| "isDataItemIn": { | |
| "@id": "SIO:SIO_001278", | |
| "@type": "@id" | |
| }, | |
| "schema": { | |
| "@id": "http://schema.org/", | |
| "@type": "@id" | |
| }, | |
| "name": { | |
| "@id": "schema:name", | |
| "@type": "xsd:string" | |
| }, | |
| "organism": { | |
| "@id": "biopax:organism", | |
| "@type": "@id" | |
| }, | |
| "owl": { | |
| "@id": "http://www.w3.org/2002/07/owl#", | |
| "@type": "@id" | |
| }, | |
| "preferredPrefix": { | |
| "@id": "idot:preferredPrefix", | |
| "@type": "xsd:string" | |
| }, | |
| "SIO": { | |
| "@id": "http://semanticscience.org/resource/", | |
| "@type": "@id" | |
| }, | |
| "subject": { | |
| "@id": "dcterms:subject", | |
| "@type": "@id" | |
| }, | |
| "void": { | |
| "@id": "http://rdfs.org/ns/void#", | |
| "@type": "@id" | |
| }, | |
| "xsd": { | |
| "@id": "http://www.w3.org/2001/XMLSchema#", | |
| "@type": "@id" | |
| }, | |
| "xref": { | |
| "@id": "biopax:xref", | |
| "@type": "@id" | |
| }, | |
| "webPage": { | |
| "@id": "foaf:page", | |
| "@type": "@id" | |
| } | |
| }, | |
| "_displayName": "Ensembl Mouse", | |
| "bridgeDbSystemCode": "EnMm", | |
| "webPage": "http://www.ensembl.org", | |
| "_iriPattern": "http://www.ensembl.org/Mus_musculus/Gene/Summary?g=$id", | |
| "exampleIdentifier": "ENSMUSG00000017167", | |
| "bridgeDbType": "gene", | |
| "organism": "Mus musculus", | |
| "isPrimary": true, | |
| "identifierPattern": "ENSMUSG\\d{11}", | |
| "_standardName": "Ensembl", | |
| "name": ["Ensembl Mouse", "Ensembl"], | |
| "uriRegexPattern": "http://www.ensembl.org/Mus_musculus/Gene/Summary?g=(ENSMUSG\\d{11})", | |
| "owl:sameAs": ["http://www.ensembl.org/Mus_musculus/Gene/Summary?g="], | |
| "@type": "Dataset", | |
| "subject": ["gpml:GeneProduct", "biopax:DnaReference"], | |
| "alternatePrefix": ["EnMm"] | |
| }, { | |
| "@context": { | |
| "@vocab": "http://www.example.org/bridgedb/input-vocab/", | |
| "alternatePrefix": { | |
| "@id": "idot:alternatePrefix", | |
| "@type": "xsd:string" | |
| }, | |
| "baseIri": "@base", | |
| "biopax": { | |
| "@id": "http://www.biopax.org/release/biopax-level3.owl#", | |
| "@type": "@id" | |
| }, | |
| "bridgeDbInput": { | |
| "@id": "http://www.example.org/bridgedb/input-vocab/", | |
| "@type": "@id" | |
| }, | |
| "Dataset": { | |
| "@id": "void:Dataset", | |
| "@type": "@id" | |
| }, | |
| "db": { | |
| "@id": "biopax:db", | |
| "@container": "@set", | |
| "@type": "xsd:string" | |
| }, | |
| "dcterms": { | |
| "@id": "http://purl.org/dc/terms/", | |
| "@type": "@id" | |
| }, | |
| "EntityReference": { | |
| "@id": "biopax:EntityReference", | |
| "@type": "@id" | |
| }, | |
| "exampleIdentifier": { | |
| "@id": "idot:exampleIdentifier", | |
| "@type": "xsd:string" | |
| }, | |
| "exampleResource": { | |
| "@id": "void:exampleResource", | |
| "@type": "@id" | |
| }, | |
| "foaf": { | |
| "@id": "http://xmlns.com/foaf/0.1/", | |
| "@type": "@id" | |
| }, | |
| "gpml": { | |
| "@id": "http://vocabularies.wikipathways.org/gpml#", | |
| "@type": "@id" | |
| }, | |
| "identifier": { | |
| "@id": "biopax:id", | |
| "@type": "xsd:string" | |
| }, | |
| "identifierPattern": { | |
| "@id": "idot:identifierPattern", | |
| "@type": "xsd:string" | |
| }, | |
| "idot": { | |
| "@id": "http://identifiers.org/idot/", | |
| "@type": "@id" | |
| }, | |
| "isDataItemIn": { | |
| "@id": "SIO:SIO_001278", | |
| "@type": "@id" | |
| }, | |
| "schema": { | |
| "@id": "http://schema.org/", | |
| "@type": "@id" | |
| }, | |
| "name": { | |
| "@id": "schema:name", | |
| "@type": "xsd:string" | |
| }, | |
| "organism": { | |
| "@id": "biopax:organism", | |
| "@type": "@id" | |
| }, | |
| "owl": { | |
| "@id": "http://www.w3.org/2002/07/owl#", | |
| "@type": "@id" | |
| }, | |
| "preferredPrefix": { | |
| "@id": "idot:preferredPrefix", | |
| "@type": "xsd:string" | |
| }, | |
| "SIO": { | |
| "@id": "http://semanticscience.org/resource/", | |
| "@type": "@id" | |
| }, | |
| "subject": { | |
| "@id": "dcterms:subject", | |
| "@type": "@id" | |
| }, | |
| "void": { | |
| "@id": "http://rdfs.org/ns/void#", | |
| "@type": "@id" | |
| }, | |
| "xsd": { | |
| "@id": "http://www.w3.org/2001/XMLSchema#", | |
| "@type": "@id" | |
| }, | |
| "xref": { | |
| "@id": "biopax:xref", | |
| "@type": "@id" | |
| }, | |
| "webPage": { | |
| "@id": "foaf:page", | |
| "@type": "@id" | |
| } | |
| }, | |
| "_displayName": "Ensembl Pig", | |
| "bridgeDbSystemCode": "EnSs", | |
| "webPage": "http://www.ensembl.org", | |
| "_iriPattern": "http://www.ensembl.org/Sus_scrofa/Gene/Summary?g=$id", | |
| "exampleIdentifier": "ENSSSCG00000004244", | |
| "bridgeDbType": "gene", | |
| "organism": "Sus scrofa", | |
| "isPrimary": true, | |
| "identifierPattern": "ENSSSCG\\d{11}", | |
| "_standardName": "Ensembl", | |
| "name": ["Ensembl Pig", "Ensembl"], | |
| "uriRegexPattern": "http://www.ensembl.org/Sus_scrofa/Gene/Summary?g=(ENSSSCG\\d{11})", | |
| "owl:sameAs": ["http://www.ensembl.org/Sus_scrofa/Gene/Summary?g="], | |
| "@type": "Dataset", | |
| "subject": ["gpml:GeneProduct", "biopax:DnaReference"], | |
| "alternatePrefix": ["EnSs"] | |
| }, { | |
| "@context": { | |
| "@vocab": "http://www.example.org/bridgedb/input-vocab/", | |
| "alternatePrefix": { | |
| "@id": "idot:alternatePrefix", | |
| "@type": "xsd:string" | |
| }, | |
| "baseIri": "@base", | |
| "biopax": { | |
| "@id": "http://www.biopax.org/release/biopax-level3.owl#", | |
| "@type": "@id" | |
| }, | |
| "bridgeDbInput": { | |
| "@id": "http://www.example.org/bridgedb/input-vocab/", | |
| "@type": "@id" | |
| }, | |
| "Dataset": { | |
| "@id": "void:Dataset", | |
| "@type": "@id" | |
| }, | |
| "db": { | |
| "@id": "biopax:db", | |
| "@container": "@set", | |
| "@type": "xsd:string" | |
| }, | |
| "dcterms": { | |
| "@id": "http://purl.org/dc/terms/", | |
| "@type": "@id" | |
| }, | |
| "EntityReference": { | |
| "@id": "biopax:EntityReference", | |
| "@type": "@id" | |
| }, | |
| "exampleIdentifier": { | |
| "@id": "idot:exampleIdentifier", | |
| "@type": "xsd:string" | |
| }, | |
| "exampleResource": { | |
| "@id": "void:exampleResource", | |
| "@type": "@id" | |
| }, | |
| "foaf": { | |
| "@id": "http://xmlns.com/foaf/0.1/", | |
| "@type": "@id" | |
| }, | |
| "gpml": { | |
| "@id": "http://vocabularies.wikipathways.org/gpml#", | |
| "@type": "@id" | |
| }, | |
| "identifier": { | |
| "@id": "biopax:id", | |
| "@type": "xsd:string" | |
| }, | |
| "identifierPattern": { | |
| "@id": "idot:identifierPattern", | |
| "@type": "xsd:string" | |
| }, | |
| "idot": { | |
| "@id": "http://identifiers.org/idot/", | |
| "@type": "@id" | |
| }, | |
| "isDataItemIn": { | |
| "@id": "SIO:SIO_001278", | |
| "@type": "@id" | |
| }, | |
| "schema": { | |
| "@id": "http://schema.org/", | |
| "@type": "@id" | |
| }, | |
| "name": { | |
| "@id": "schema:name", | |
| "@type": "xsd:string" | |
| }, | |
| "organism": { | |
| "@id": "biopax:organism", | |
| "@type": "@id" | |
| }, | |
| "owl": { | |
| "@id": "http://www.w3.org/2002/07/owl#", | |
| "@type": "@id" | |
| }, | |
| "preferredPrefix": { | |
| "@id": "idot:preferredPrefix", | |
| "@type": "xsd:string" | |
| }, | |
| "SIO": { | |
| "@id": "http://semanticscience.org/resource/", | |
| "@type": "@id" | |
| }, | |
| "subject": { | |
| "@id": "dcterms:subject", | |
| "@type": "@id" | |
| }, | |
| "void": { | |
| "@id": "http://rdfs.org/ns/void#", | |
| "@type": "@id" | |
| }, | |
| "xsd": { | |
| "@id": "http://www.w3.org/2001/XMLSchema#", | |
| "@type": "@id" | |
| }, | |
| "xref": { | |
| "@id": "biopax:xref", | |
| "@type": "@id" | |
| }, | |
| "webPage": { | |
| "@id": "foaf:page", | |
| "@type": "@id" | |
| } | |
| }, | |
| "_displayName": "Ensembl Rat", | |
| "bridgeDbSystemCode": "EnRn", | |
| "webPage": "http://www.ensembl.org", | |
| "_iriPattern": "http://www.ensembl.org/Rattus_norvegicus/Gene/Summary?g=$id", | |
| "exampleIdentifier": "ENSRNOG00000016648", | |
| "bridgeDbType": "gene", | |
| "organism": "Rattus norvegicus", | |
| "isPrimary": true, | |
| "identifierPattern": "ENSRNOG\\d{11}", | |
| "_standardName": "Ensembl", | |
| "name": ["Ensembl Rat", "Ensembl"], | |
| "uriRegexPattern": "http://www.ensembl.org/Rattus_norvegicus/Gene/Summary?g=(ENSRNOG\\d{11})", | |
| "owl:sameAs": ["http://www.ensembl.org/Rattus_norvegicus/Gene/Summary?g="], | |
| "@type": "Dataset", | |
| "subject": ["gpml:GeneProduct", "biopax:DnaReference"], | |
| "alternatePrefix": ["EnRn"] | |
| }, { | |
| "@context": { | |
| "@vocab": "http://www.example.org/bridgedb/input-vocab/", | |
| "alternatePrefix": { | |
| "@id": "idot:alternatePrefix", | |
| "@type": "xsd:string" | |
| }, | |
| "baseIri": "@base", | |
| "biopax": { | |
| "@id": "http://www.biopax.org/release/biopax-level3.owl#", | |
| "@type": "@id" | |
| }, | |
| "bridgeDbInput": { | |
| "@id": "http://www.example.org/bridgedb/input-vocab/", | |
| "@type": "@id" | |
| }, | |
| "Dataset": { | |
| "@id": "void:Dataset", | |
| "@type": "@id" | |
| }, | |
| "db": { | |
| "@id": "biopax:db", | |
| "@container": "@set", | |
| "@type": "xsd:string" | |
| }, | |
| "dcterms": { | |
| "@id": "http://purl.org/dc/terms/", | |
| "@type": "@id" | |
| }, | |
| "EntityReference": { | |
| "@id": "biopax:EntityReference", | |
| "@type": "@id" | |
| }, | |
| "exampleIdentifier": { | |
| "@id": "idot:exampleIdentifier", | |
| "@type": "xsd:string" | |
| }, | |
| "exampleResource": { | |
| "@id": "void:exampleResource", | |
| "@type": "@id" | |
| }, | |
| "foaf": { | |
| "@id": "http://xmlns.com/foaf/0.1/", | |
| "@type": "@id" | |
| }, | |
| "gpml": { | |
| "@id": "http://vocabularies.wikipathways.org/gpml#", | |
| "@type": "@id" | |
| }, | |
| "identifier": { | |
| "@id": "biopax:id", | |
| "@type": "xsd:string" | |
| }, | |
| "identifierPattern": { | |
| "@id": "idot:identifierPattern", | |
| "@type": "xsd:string" | |
| }, | |
| "idot": { | |
| "@id": "http://identifiers.org/idot/", | |
| "@type": "@id" | |
| }, | |
| "isDataItemIn": { | |
| "@id": "SIO:SIO_001278", | |
| "@type": "@id" | |
| }, | |
| "schema": { | |
| "@id": "http://schema.org/", | |
| "@type": "@id" | |
| }, | |
| "name": { | |
| "@id": "schema:name", | |
| "@type": "xsd:string" | |
| }, | |
| "organism": { | |
| "@id": "biopax:organism", | |
| "@type": "@id" | |
| }, | |
| "owl": { | |
| "@id": "http://www.w3.org/2002/07/owl#", | |
| "@type": "@id" | |
| }, | |
| "preferredPrefix": { | |
| "@id": "idot:preferredPrefix", | |
| "@type": "xsd:string" | |
| }, | |
| "SIO": { | |
| "@id": "http://semanticscience.org/resource/", | |
| "@type": "@id" | |
| }, | |
| "subject": { | |
| "@id": "dcterms:subject", | |
| "@type": "@id" | |
| }, | |
| "void": { | |
| "@id": "http://rdfs.org/ns/void#", | |
| "@type": "@id" | |
| }, | |
| "xsd": { | |
| "@id": "http://www.w3.org/2001/XMLSchema#", | |
| "@type": "@id" | |
| }, | |
| "xref": { | |
| "@id": "biopax:xref", | |
| "@type": "@id" | |
| }, | |
| "webPage": { | |
| "@id": "foaf:page", | |
| "@type": "@id" | |
| } | |
| }, | |
| "_displayName": "Ensembl Xenopus", | |
| "bridgeDbSystemCode": "EnXt", | |
| "webPage": "http://www.ensembl.org", | |
| "_iriPattern": "http://www.ensembl.org/Xenopus_tropicalis/Gene/Summary?g=$id", | |
| "exampleIdentifier": "ENSXETG00000029448", | |
| "bridgeDbType": "gene", | |
| "organism": "Xenopus tropicalis", | |
| "isPrimary": true, | |
| "identifierPattern": "ENSXETG\\d{11}", | |
| "_standardName": "Ensembl", | |
| "name": ["Ensembl Xenopus", "Ensembl"], | |
| "uriRegexPattern": "http://www.ensembl.org/Xenopus_tropicalis/Gene/Summary?g=(ENSXETG\\d{11})", | |
| "owl:sameAs": ["http://www.ensembl.org/Xenopus_tropicalis/Gene/Summary?g="], | |
| "@type": "Dataset", | |
| "subject": ["gpml:GeneProduct", "biopax:DnaReference"], | |
| "alternatePrefix": ["EnXt"] | |
| }, { | |
| "@context": { | |
| "@vocab": "http://www.example.org/bridgedb/input-vocab/", | |
| "alternatePrefix": { | |
| "@id": "idot:alternatePrefix", | |
| "@type": "xsd:string" | |
| }, | |
| "baseIri": "@base", | |
| "biopax": { | |
| "@id": "http://www.biopax.org/release/biopax-level3.owl#", | |
| "@type": "@id" | |
| }, | |
| "bridgeDbInput": { | |
| "@id": "http://www.example.org/bridgedb/input-vocab/", | |
| "@type": "@id" | |
| }, | |
| "Dataset": { | |
| "@id": "void:Dataset", | |
| "@type": "@id" | |
| }, | |
| "db": { | |
| "@id": "biopax:db", | |
| "@container": "@set", | |
| "@type": "xsd:string" | |
| }, | |
| "dcterms": { | |
| "@id": "http://purl.org/dc/terms/", | |
| "@type": "@id" | |
| }, | |
| "EntityReference": { | |
| "@id": "biopax:EntityReference", | |
| "@type": "@id" | |
| }, | |
| "exampleIdentifier": { | |
| "@id": "idot:exampleIdentifier", | |
| "@type": "xsd:string" | |
| }, | |
| "exampleResource": { | |
| "@id": "void:exampleResource", | |
| "@type": "@id" | |
| }, | |
| "foaf": { | |
| "@id": "http://xmlns.com/foaf/0.1/", | |
| "@type": "@id" | |
| }, | |
| "gpml": { | |
| "@id": "http://vocabularies.wikipathways.org/gpml#", | |
| "@type": "@id" | |
| }, | |
| "identifier": { | |
| "@id": "biopax:id", | |
| "@type": "xsd:string" | |
| }, | |
| "identifierPattern": { | |
| "@id": "idot:identifierPattern", | |
| "@type": "xsd:string" | |
| }, | |
| "idot": { | |
| "@id": "http://identifiers.org/idot/", | |
| "@type": "@id" | |
| }, | |
| "isDataItemIn": { | |
| "@id": "SIO:SIO_001278", | |
| "@type": "@id" | |
| }, | |
| "schema": { | |
| "@id": "http://schema.org/", | |
| "@type": "@id" | |
| }, | |
| "name": { | |
| "@id": "schema:name", | |
| "@type": "xsd:string" | |
| }, | |
| "organism": { | |
| "@id": "biopax:organism", | |
| "@type": "@id" | |
| }, | |
| "owl": { | |
| "@id": "http://www.w3.org/2002/07/owl#", | |
| "@type": "@id" | |
| }, | |
| "preferredPrefix": { | |
| "@id": "idot:preferredPrefix", | |
| "@type": "xsd:string" | |
| }, | |
| "SIO": { | |
| "@id": "http://semanticscience.org/resource/", | |
| "@type": "@id" | |
| }, | |
| "subject": { | |
| "@id": "dcterms:subject", | |
| "@type": "@id" | |
| }, | |
| "void": { | |
| "@id": "http://rdfs.org/ns/void#", | |
| "@type": "@id" | |
| }, | |
| "xsd": { | |
| "@id": "http://www.w3.org/2001/XMLSchema#", | |
| "@type": "@id" | |
| }, | |
| "xref": { | |
| "@id": "biopax:xref", | |
| "@type": "@id" | |
| }, | |
| "webPage": { | |
| "@id": "foaf:page", | |
| "@type": "@id" | |
| } | |
| }, | |
| "_displayName": "Ensembl Yeast", | |
| "bridgeDbSystemCode": "EnSc", | |
| "webPage": "http://www.ensembl.org", | |
| "_iriPattern": "http://www.ensembl.org/Saccharomyces_cerevisiae/Gene/Summary?g=$id", | |
| "exampleIdentifier": "YGR147C", | |
| "bridgeDbType": "gene", | |
| "organism": "Saccharomyces cerevisiae", | |
| "isPrimary": true, | |
| "identifierPattern": "Y[A-Z][RL]\\d{3}[WC](?:\\-[A-Z])?", | |
| "_standardName": "Ensembl", | |
| "name": ["Ensembl Yeast", "Ensembl"], | |
| "uriRegexPattern": "http://www.ensembl.org/Saccharomyces_cerevisiae/Gene/Summary?g=(Y[A-Z][RL]\\d{3}[WC](?:\\-[A-Z])?)", | |
| "owl:sameAs": ["http://www.ensembl.org/Saccharomyces_cerevisiae/Gene/Summary?g="], | |
| "@type": "Dataset", | |
| "subject": ["gpml:GeneProduct", "biopax:DnaReference"], | |
| "alternatePrefix": ["EnSc"] | |
| }, { | |
| "@context": { | |
| "@vocab": "http://www.example.org/bridgedb/input-vocab/", | |
| "alternatePrefix": { | |
| "@id": "idot:alternatePrefix", | |
| "@type": "xsd:string" | |
| }, | |
| "baseIri": "@base", | |
| "biopax": { | |
| "@id": "http://www.biopax.org/release/biopax-level3.owl#", | |
| "@type": "@id" | |
| }, | |
| "bridgeDbInput": { | |
| "@id": "http://www.example.org/bridgedb/input-vocab/", | |
| "@type": "@id" | |
| }, | |
| "Dataset": { | |
| "@id": "void:Dataset", | |
| "@type": "@id" | |
| }, | |
| "db": { | |
| "@id": "biopax:db", | |
| "@container": "@set", | |
| "@type": "xsd:string" | |
| }, | |
| "dcterms": { | |
| "@id": "http://purl.org/dc/terms/", | |
| "@type": "@id" | |
| }, | |
| "EntityReference": { | |
| "@id": "biopax:EntityReference", | |
| "@type": "@id" | |
| }, | |
| "exampleIdentifier": { | |
| "@id": "idot:exampleIdentifier", | |
| "@type": "xsd:string" | |
| }, | |
| "exampleResource": { | |
| "@id": "void:exampleResource", | |
| "@type": "@id" | |
| }, | |
| "foaf": { | |
| "@id": "http://xmlns.com/foaf/0.1/", | |
| "@type": "@id" | |
| }, | |
| "gpml": { | |
| "@id": "http://vocabularies.wikipathways.org/gpml#", | |
| "@type": "@id" | |
| }, | |
| "identifier": { | |
| "@id": "biopax:id", | |
| "@type": "xsd:string" | |
| }, | |
| "identifierPattern": { | |
| "@id": "idot:identifierPattern", | |
| "@type": "xsd:string" | |
| }, | |
| "idot": { | |
| "@id": "http://identifiers.org/idot/", | |
| "@type": "@id" | |
| }, | |
| "isDataItemIn": { | |
| "@id": "SIO:SIO_001278", | |
| "@type": "@id" | |
| }, | |
| "schema": { | |
| "@id": "http://schema.org/", | |
| "@type": "@id" | |
| }, | |
| "name": { | |
| "@id": "schema:name", | |
| "@type": "xsd:string" | |
| }, | |
| "organism": { | |
| "@id": "biopax:organism", | |
| "@type": "@id" | |
| }, | |
| "owl": { | |
| "@id": "http://www.w3.org/2002/07/owl#", | |
| "@type": "@id" | |
| }, | |
| "preferredPrefix": { | |
| "@id": "idot:preferredPrefix", | |
| "@type": "xsd:string" | |
| }, | |
| "SIO": { | |
| "@id": "http://semanticscience.org/resource/", | |
| "@type": "@id" | |
| }, | |
| "subject": { | |
| "@id": "dcterms:subject", | |
| "@type": "@id" | |
| }, | |
| "void": { | |
| "@id": "http://rdfs.org/ns/void#", | |
| "@type": "@id" | |
| }, | |
| "xsd": { | |
| "@id": "http://www.w3.org/2001/XMLSchema#", | |
| "@type": "@id" | |
| }, | |
| "xref": { | |
| "@id": "biopax:xref", | |
| "@type": "@id" | |
| }, | |
| "webPage": { | |
| "@id": "foaf:page", | |
| "@type": "@id" | |
| } | |
| }, | |
| "_displayName": "Ensembl Zebrafish", | |
| "bridgeDbSystemCode": "EnDr", | |
| "webPage": "http://www.ensembl.org", | |
| "_iriPattern": "http://www.ensembl.org/Danio_rerio/Gene/Summary?g=$id", | |
| "exampleIdentifier": "ENSDARG00000024771", | |
| "bridgeDbType": "gene", | |
| "organism": "Danio rerio", | |
| "isPrimary": true, | |
| "identifierPattern": "ENSDARG\\d{11}", | |
| "_standardName": "Ensembl", | |
| "name": ["Ensembl Zebrafish", "Ensembl"], | |
| "uriRegexPattern": "http://www.ensembl.org/Danio_rerio/Gene/Summary?g=(ENSDARG\\d{11})", | |
| "owl:sameAs": ["http://www.ensembl.org/Danio_rerio/Gene/Summary?g="], | |
| "@type": "Dataset", | |
| "subject": ["gpml:GeneProduct", "biopax:DnaReference"], | |
| "alternatePrefix": ["EnDr"] | |
| }] |
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