Skip to content

Instantly share code, notes, and snippets.

@arm2arm

arm2arm/gist:f8afe31e66db1c6b2e8230e631149a8d

Last active September 17, 2025 09:37
Show Gist options

  • Select an option

    Learn more about clone URLs
  • Save arm2arm/f8afe31e66db1c6b2e8230e631149a8d to your computer and use it in GitHub Desktop.

Select an option

Learn more about clone URLs
Save arm2arm/f8afe31e66db1c6b2e8230e631149a8d to your computer and use it in GitHub Desktop.
Download ZIP
Reana +Snakemake + c4p tricks
Raw
gistfile1.mdx

Q: can i login to node? A: Just login to the c4p login node and run "condor_ssh_to_job jobid".

show me an example for snakemake with memory limits: A:

 rule prepare:
    container:
        "astro-ml:latest"
    resources:
           compute_backend="compute4punch",
           c4p_cpu_cores="6",
           c4p_memory_limit="20Gi"
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment