Created
August 3, 2010 14:43
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| arockwell@hippo:/usr/share/vivoingest$ sudo ./scripts/run.sh | |
| 2010-08-03 10:42:25,019 INFO [PubmedSOAPFetch] Fetch: Start | |
| 2010-08-03 10:42:25,284 ERROR [ScriptModule] AxisConfiguration getRepository returns null, cannot deploy scripts | |
| 2010-08-03 10:42:27,741 INFO [PubmedSOAPFetch] Fetch: End | |
| 2010-08-03 10:42:28,438 INFO [XSLTranslator] Translation: Start | |
| 2010-08-03 10:42:36,219 INFO [XSLTranslator] Translation: End | |
| 2010-08-03 10:42:36,604 INFO [Score] Scoring: Start | |
| 2010-08-03 10:42:36,624 INFO [Score] Loading configuration and models | |
| 2010-08-03 10:42:49,352 INFO [Score] Executing exactMatch for workEmail | |
| 2010-08-03 10:42:49,553 INFO [Score] Looping thru matching workEmail from input | |
| 2010-08-03 10:42:49,558 INFO [Score] Checking for pam.pieper@jax.ufl.edu from http://vivoweb.org/pubMed/article/pmid20624575 in VIVO | |
| 2010-08-03 10:42:49,575 INFO [Score] Found pam.pieper@jax.ufl.edu for person http://vivo.ufl.edu/individual/n15105 | |
| 2010-08-03 10:42:49,575 INFO [Score] Adding paper http://vivoweb.org/pubMed/article/pmid20624575 | |
| 2010-08-03 10:42:49,698 INFO [Score] Link paper http://vivoweb.org/pubMed/article/pmid20624575 to person http://vivo.ufl.edu/individual/n15105 in VIVO | |
| 2010-08-03 10:42:49,808 FATAL [Score] | |
| java.lang.NullPointerException | |
| at org.vivoweb.ingest.score.Score.replaceResource(Score.java:298) | |
| at org.vivoweb.ingest.score.Score.commitResultSet(Score.java:234) | |
| at org.vivoweb.ingest.score.Score.exactMatch(Score.java:464) | |
| at org.vivoweb.ingest.score.Score.main(Score.java:127) | |
| 2010-08-03 10:42:49,809 INFO [Score] Scoring: End |
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