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asford/read_structures.py

Created January 17, 2014 01:56
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Reading structures from structure databases by id.
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read_structures.py
import interface_fragment_matching.structure_database
db = interface_fragment_matching.structure_database.StructureDatabase("/work/fordas/test_sets/vall_store.h5")
id_list = db.structures.read()
for i in id_list["id"][:10]:
id_residues = db.residues.read_where("id == i")
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