Setup a virtualenv in the /work filesystem to manage installed packages. You will install development dependencies into this environment, including updated versions of packages we've pre-installed onto the dig machine images.
mkdir ~/virtualenvs
pushd ~/virtualenvs
virtualenv dev --system-site-packages
popd
Install updated versions the core development tools numpy/pip/wheel/tables/etc...
source ~/virtualenvs/dev/bin/activate
# First update pip support modules
pip install --upgrade -r /work/fordas/virtualenvs/requirements/setup.txt
# Install core development modules, installing from precompiled binaries if available
pip install -f /work/fordas/virtualenvs/wheelhouse -r /work/fordas/virtualenvs/requirements/core.txt
# Install additional development tools
pip install --upgrade ipython
Setup notebook server for access from remote hosts by adding the following to ~/.ipython/profile_default/ipython_notebook_config.py:
import socket
c.NotebookApp.ip = socket.gethostname()
c.NotebookApp.open_browser = False
c.NotebookApp.port = 8888
Navigate to directory containing database_and_distance_calculation.ipynb, launch notebook server.
cd <dir>
ipython notebook
Open URL provided (eg. http://dig5:8890/) to view notebook.