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This is an output of OMERO CLI to prepare users and groups and then put group into share to override the default group permission making it rear-only and sharing with public user
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| + echo 'create public user' | |
| create public user | |
| + /home/omero/workspace/OMERO-server/OMERO.server/bin/omero login -u root -w omero -s localhost -p 4064 | |
| Created session acc7b1af-82a2-4762-b9ff-a30ada1c0676 (root@localhost:4064). Idle timeout: 10 min. Current group: system | |
| + /home/omero/workspace/OMERO-server/OMERO.server/bin/omero group add public --perms rwr--- | |
| Using session acc7b1af-82a2-4762-b9ff-a30ada1c0676 (root@localhost:4064). Idle timeout: 10 min. Current group: system | |
| Added group public (id=3) with permissions rwr--- | |
| + /home/omero/workspace/OMERO-server/OMERO.server/bin/omero user add public Public User --group-name public -P ome | |
| Using session acc7b1af-82a2-4762-b9ff-a30ada1c0676 (root@localhost:4064). Idle timeout: 10 min. Current group: system | |
| Added user public (id=2) with password | |
| + echo 'create group and users' | |
| create group and users | |
| + /home/omero/workspace/OMERO-server/OMERO.server/bin/omero group add testgroup --type read-annotate | |
| Using session acc7b1af-82a2-4762-b9ff-a30ada1c0676 (root@localhost:4064). Idle timeout: 10 min. Current group: system | |
| Added group testgroup (id=4) with permissions rwra-- | |
| + /home/omero/workspace/OMERO-server/OMERO.server/bin/omero user add user-1 User One --group-name testgroup -P ome | |
| Using session acc7b1af-82a2-4762-b9ff-a30ada1c0676 (root@localhost:4064). Idle timeout: 10 min. Current group: system | |
| Added user user-1 (id=3) with password | |
| + /home/omero/workspace/OMERO-server/OMERO.server/bin/omero user add user-2 User Two --group-name testgroup -P ome | |
| Using session acc7b1af-82a2-4762-b9ff-a30ada1c0676 (root@localhost:4064). Idle timeout: 10 min. Current group: system | |
| Added user user-2 (id=4) with password | |
| + /home/omero/workspace/OMERO-server/OMERO.server/bin/omero group add testprv --type private | |
| Using session acc7b1af-82a2-4762-b9ff-a30ada1c0676 (root@localhost:4064). Idle timeout: 10 min. Current group: system | |
| Added group testprv (id=5) with permissions rw---- | |
| + /home/omero/workspace/OMERO-server/OMERO.server/bin/omero group adduser --name testprv --user-name user-1 | |
| Using session acc7b1af-82a2-4762-b9ff-a30ada1c0676 (root@localhost:4064). Idle timeout: 10 min. Current group: system | |
| Added 3 to group 5 | |
| + /home/omero/workspace/OMERO-server/OMERO.server/bin/omero group adduser --name testprv --user-name user-2 | |
| Using session acc7b1af-82a2-4762-b9ff-a30ada1c0676 (root@localhost:4064). Idle timeout: 10 min. Current group: system | |
| Added 4 to group 5 | |
| + /home/omero/workspace/OMERO-server/OMERO.server/bin/omero group listusers --group-name testgroup | |
| Using session acc7b1af-82a2-4762-b9ff-a30ada1c0676 (root@localhost:4064). Idle timeout: 10 min. Current group: system | |
| id | login | first name | last name | email | active | ldap | admin | member of | owner of | |
| ----+--------+------------+-----------+-------+--------+-------+-------+-----------+---------- | |
| 3 | user-1 | User | One | | Yes | False | | 4,5 | | |
| 4 | user-2 | User | Two | | Yes | False | | 4,5 | | |
| (2 rows) | |
| + /home/omero/workspace/OMERO-server/OMERO.server/bin/omero group listusers --group-name testprv | |
| Using session acc7b1af-82a2-4762-b9ff-a30ada1c0676 (root@localhost:4064). Idle timeout: 10 min. Current group: system | |
| id | login | first name | last name | email | active | ldap | admin | member of | owner of | |
| ----+--------+------------+-----------+-------+--------+-------+-------+-----------+---------- | |
| 3 | user-1 | User | One | | Yes | False | | 4,5 | | |
| 4 | user-2 | User | Two | | Yes | False | | 4,5 | | |
| (2 rows) | |
| + /home/omero/workspace/OMERO-server/OMERO.server/bin/omero logout | |
| + echo 'import images to both group' | |
| import images to both group | |
| + curl -o /home/omero/workspace/OMERO-server/test.dv http://downloads.openmicroscopy.org/images/DV/P-TRE_14_R3D_D3D.dv | |
| % Total % Received % Xferd Average Speed Time Time Time Current | |
| Dload Upload Total Spent Left Speed | |
| 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 | |
| 64 142M 64 91.8M 0 0 109M 0 0:00:01 --:--:-- 0:00:01 109M | |
| 100 142M 100 142M 0 0 109M 0 0:00:01 0:00:01 --:--:-- 109M | |
| + /home/omero/workspace/OMERO-server/OMERO.server/bin/omero import /home/omero/workspace/OMERO-server/test.dv -g testgroup -u user-1 -w ome -s localhost -p 4064 | |
| Skipped session 26637d03-cec1-422a-a707-0614fcf8366f due to property conflicts: omero.group: None!=testgroup | |
| Skipped session f48e6ac5-7a07-4691-b233-ff950b55dd97 due to property conflicts: omero.group: testprv!=testgroup | |
| Created session ec800a5d-0ca0-43a0-b934-e7a3ae78cd1f (user-1@localhost:4064). Idle timeout: 10 min. Current group: testgroup | |
| 2016-06-26 07:32:31,006 209 [ main] INFO ome.formats.importer.ImportConfig - OMERO Version: 5.3.0-m2-763-9f57b02-ice36-b1 | |
| 2016-06-26 07:32:31,018 221 [ main] INFO ome.formats.importer.ImportConfig - Bioformats version: 5.2.0-m4 revision: f08759bccdfe9058935fc0d93d7897dfb3cf7bf4 date: 23 June 2016 | |
| 2016-06-26 07:32:31,053 256 [ main] INFO formats.importer.cli.CommandLineImporter - Log levels -- Bio-Formats: ERROR OMERO.importer: INFO | |
| 2016-06-26 07:32:31,332 535 [ main] INFO ome.formats.importer.ImportCandidates - Depth: 4 Metadata Level: MINIMUM | |
| 2016-06-26 07:32:31,391 594 [ main] INFO ome.formats.importer.ImportCandidates - 1 file(s) parsed into 1 group(s) with 1 call(s) to setId in 56ms. (59ms total) [0 unknowns] | |
| 2016-06-26 07:32:31,600 803 [ main] INFO ome.formats.OMEROMetadataStoreClient - Attempting initial SSL connection to localhost:4064 | |
| 2016-06-26 07:32:32,011 1214 [ main] INFO ome.formats.OMEROMetadataStoreClient - Insecure connection requested, falling back | |
| 2016-06-26 07:32:32,404 1607 [ main] INFO ome.formats.OMEROMetadataStoreClient - Server: 5.3.0 | |
| 2016-06-26 07:32:32,404 1607 [ main] INFO ome.formats.OMEROMetadataStoreClient - Client: 5.3.0-m2-763-9f57b02-ice36-b1 | |
| 2016-06-26 07:32:32,405 1608 [ main] INFO ome.formats.OMEROMetadataStoreClient - Java Version: 1.8.0_92 | |
| 2016-06-26 07:32:32,405 1608 [ main] INFO ome.formats.OMEROMetadataStoreClient - OS Name: Linux | |
| 2016-06-26 07:32:32,405 1608 [ main] INFO ome.formats.OMEROMetadataStoreClient - OS Arch: amd64 | |
| 2016-06-26 07:32:32,405 1608 [ main] INFO ome.formats.OMEROMetadataStoreClient - OS Version: 3.10.0-327.13.1.el7.x86_64 | |
| 2016-06-26 07:32:32,505 1708 [ main] INFO ormats.importer.cli.LoggingImportMonitor - FILESET_UPLOAD_PREPARATION | |
| 2016-06-26 07:32:32,969 2172 [ main] INFO ormats.importer.cli.LoggingImportMonitor - FILESET_UPLOAD_START | |
| 2016-06-26 07:32:32,977 2180 [ main] INFO ts.importer.transfers.UploadFileTransfer - Transferring /home/omero/workspace/OMERO-server/test.dv... | |
| 2016-06-26 07:32:33,032 2235 [ main] INFO ormats.importer.cli.LoggingImportMonitor - FILE_UPLOAD_STARTED: /home/omero/workspace/OMERO-server/test.dv | |
| 2016-06-26 07:32:35,315 4518 [ main] INFO ormats.importer.cli.LoggingImportMonitor - FILE_UPLOAD_COMPLETE: /home/omero/workspace/OMERO-server/test.dv | |
| 2016-06-26 07:32:36,082 5285 [ main] INFO ormats.importer.cli.LoggingImportMonitor - FILESET_UPLOAD_END | |
| 2016-06-26 07:32:36,213 5416 [ main] INFO ormats.importer.cli.LoggingImportMonitor - IMPORT_STARTED Logfile: 25 | |
| 2016-06-26 07:32:37,176 6379 [l.Client-1] INFO ormats.importer.cli.LoggingImportMonitor - METADATA_IMPORTED Step: 1 of 5 Logfile: 25 | |
| 2016-06-26 07:32:39,859 9062 [l.Client-0] INFO ormats.importer.cli.LoggingImportMonitor - PIXELDATA_PROCESSED Step: 2 of 5 Logfile: 25 | |
| 2016-06-26 07:32:40,561 9764 [l.Client-1] INFO ormats.importer.cli.LoggingImportMonitor - THUMBNAILS_GENERATED Step: 3 of 5 Logfile: 25 | |
| 2016-06-26 07:32:40,591 9794 [l.Client-0] INFO ormats.importer.cli.LoggingImportMonitor - METADATA_PROCESSED Step: 4 of 5 Logfile: 25 | |
| 2016-06-26 07:32:40,625 9828 [l.Client-0] INFO ormats.importer.cli.LoggingImportMonitor - OBJECTS_RETURNED Step: 5 of 5 Logfile: 25 | |
| 2016-06-26 07:32:40,799 10002 [l.Client-1] INFO ormats.importer.cli.LoggingImportMonitor - IMPORT_DONE Imported file: /home/omero/workspace/OMERO-server/test.dv | |
| Imported pixels: | |
| 1 | |
| Other imported objects: | |
| Fileset:1 | |
| Image:1 | |
| 2016-06-26 07:32:40,800 10003 [l.Client-1] INFO ome.formats.importer.cli.ErrorHandler - Number of errors: 0 | |
| ==> Summary | |
| 1 file uploaded, 1 fileset created, 1 image imported, 0 errors in 0:00:08.300 | |
| !! 06/26/16 07:32:40.924 error: 2 communicators not destroyed during global destruction.+ /home/omero/workspace/OMERO-server/OMERO.server/bin/omero import /home/omero/workspace/OMERO-server/test.dv -g testgroup -u user-2 -w ome -s localhost -p 4064 | |
| Skipped session b2c885eb-28d1-4b64-a1f8-6c8d1f4684b3 due to property conflicts: omero.group: None!=testgroup | |
| Skipped session 869d715d-0ace-42c9-9e48-218ff56126c0 due to property conflicts: omero.group: testprv!=testgroup | |
| Created session f71d8a25-b874-4211-aef3-d5daa3f83136 (user-2@localhost:4064). Idle timeout: 10 min. Current group: testgroup | |
| 2016-06-26 07:32:42,059 213 [ main] INFO ome.formats.importer.ImportConfig - OMERO Version: 5.3.0-m2-763-9f57b02-ice36-b1 | |
| 2016-06-26 07:32:42,072 226 [ main] INFO ome.formats.importer.ImportConfig - Bioformats version: 5.2.0-m4 revision: f08759bccdfe9058935fc0d93d7897dfb3cf7bf4 date: 23 June 2016 | |
| 2016-06-26 07:32:42,106 260 [ main] INFO formats.importer.cli.CommandLineImporter - Log levels -- Bio-Formats: ERROR OMERO.importer: INFO | |
| 2016-06-26 07:32:42,396 550 [ main] INFO ome.formats.importer.ImportCandidates - Depth: 4 Metadata Level: MINIMUM | |
| 2016-06-26 07:32:42,457 611 [ main] INFO ome.formats.importer.ImportCandidates - 1 file(s) parsed into 1 group(s) with 1 call(s) to setId in 57ms. (61ms total) [0 unknowns] | |
| 2016-06-26 07:32:42,650 804 [ main] INFO ome.formats.OMEROMetadataStoreClient - Attempting initial SSL connection to localhost:4064 | |
| 2016-06-26 07:32:43,106 1260 [ main] INFO ome.formats.OMEROMetadataStoreClient - Insecure connection requested, falling back | |
| 2016-06-26 07:32:43,356 1510 [ main] INFO ome.formats.OMEROMetadataStoreClient - Server: 5.3.0 | |
| 2016-06-26 07:32:43,357 1511 [ main] INFO ome.formats.OMEROMetadataStoreClient - Client: 5.3.0-m2-763-9f57b02-ice36-b1 | |
| 2016-06-26 07:32:43,357 1511 [ main] INFO ome.formats.OMEROMetadataStoreClient - Java Version: 1.8.0_92 | |
| 2016-06-26 07:32:43,357 1511 [ main] INFO ome.formats.OMEROMetadataStoreClient - OS Name: Linux | |
| 2016-06-26 07:32:43,357 1511 [ main] INFO ome.formats.OMEROMetadataStoreClient - OS Arch: amd64 | |
| 2016-06-26 07:32:43,357 1511 [ main] INFO ome.formats.OMEROMetadataStoreClient - OS Version: 3.10.0-327.13.1.el7.x86_64 | |
| 2016-06-26 07:32:43,432 1586 [ main] INFO ormats.importer.cli.LoggingImportMonitor - FILESET_UPLOAD_PREPARATION | |
| 2016-06-26 07:32:43,723 1877 [ main] INFO ormats.importer.cli.LoggingImportMonitor - FILESET_UPLOAD_START | |
| 2016-06-26 07:32:43,732 1886 [ main] INFO ts.importer.transfers.UploadFileTransfer - Transferring /home/omero/workspace/OMERO-server/test.dv... | |
| 2016-06-26 07:32:43,761 1915 [ main] INFO ormats.importer.cli.LoggingImportMonitor - FILE_UPLOAD_STARTED: /home/omero/workspace/OMERO-server/test.dv | |
| 2016-06-26 07:32:46,122 4276 [ main] INFO ormats.importer.cli.LoggingImportMonitor - FILE_UPLOAD_COMPLETE: /home/omero/workspace/OMERO-server/test.dv | |
| 2016-06-26 07:32:46,824 4978 [ main] INFO ormats.importer.cli.LoggingImportMonitor - FILESET_UPLOAD_END | |
| 2016-06-26 07:32:46,888 5042 [ main] INFO ormats.importer.cli.LoggingImportMonitor - IMPORT_STARTED Logfile: 41 | |
| 2016-06-26 07:32:47,214 5368 [l.Client-0] INFO ormats.importer.cli.LoggingImportMonitor - METADATA_IMPORTED Step: 1 of 5 Logfile: 41 | |
| 2016-06-26 07:32:49,625 7779 [l.Client-1] INFO ormats.importer.cli.LoggingImportMonitor - PIXELDATA_PROCESSED Step: 2 of 5 Logfile: 41 | |
| 2016-06-26 07:32:49,841 7995 [l.Client-0] INFO ormats.importer.cli.LoggingImportMonitor - THUMBNAILS_GENERATED Step: 3 of 5 Logfile: 41 | |
| 2016-06-26 07:32:49,861 8015 [l.Client-1] INFO ormats.importer.cli.LoggingImportMonitor - METADATA_PROCESSED Step: 4 of 5 Logfile: 41 | |
| 2016-06-26 07:32:49,877 8031 [l.Client-0] INFO ormats.importer.cli.LoggingImportMonitor - OBJECTS_RETURNED Step: 5 of 5 Logfile: 41 | |
| 2016-06-26 07:32:50,028 8182 [l.Client-1] INFO ormats.importer.cli.LoggingImportMonitor - IMPORT_DONE Imported file: /home/omero/workspace/OMERO-server/test.dv | |
| Imported pixels: | |
| 2 | |
| Other imported objects: | |
| Fileset:2 | |
| Image:2 | |
| 2016-06-26 07:32:50,028 8182 [l.Client-1] INFO ome.formats.importer.cli.ErrorHandler - Number of errors: 0 | |
| ==> Summary | |
| 1 file uploaded, 1 fileset created, 1 image imported, 0 errors in 0:00:06.602 | |
| !! 06/26/16 07:32:50.163 error: 2 communicators not destroyed during global destruction.+ /home/omero/workspace/OMERO-server/OMERO.server/bin/omero import /home/omero/workspace/OMERO-server/test.dv -g testprv -u user-1 -w ome -s localhost -p 4064 | |
| Skipped session 26637d03-cec1-422a-a707-0614fcf8366f due to property conflicts: omero.group: None!=testprv | |
| Skipped session ec800a5d-0ca0-43a0-b934-e7a3ae78cd1f due to property conflicts: omero.group: testgroup!=testprv | |
| Created session 19986f0c-5859-48f1-99cc-319c625aff59 (user-1@localhost:4064). Idle timeout: 10 min. Current group: testprv | |
| 2016-06-26 07:32:51,184 207 [ main] INFO ome.formats.importer.ImportConfig - OMERO Version: 5.3.0-m2-763-9f57b02-ice36-b1 | |
| 2016-06-26 07:32:51,196 219 [ main] INFO ome.formats.importer.ImportConfig - Bioformats version: 5.2.0-m4 revision: f08759bccdfe9058935fc0d93d7897dfb3cf7bf4 date: 23 June 2016 | |
| 2016-06-26 07:32:51,229 252 [ main] INFO formats.importer.cli.CommandLineImporter - Log levels -- Bio-Formats: ERROR OMERO.importer: INFO | |
| 2016-06-26 07:32:51,492 515 [ main] INFO ome.formats.importer.ImportCandidates - Depth: 4 Metadata Level: MINIMUM | |
| 2016-06-26 07:32:51,546 569 [ main] INFO ome.formats.importer.ImportCandidates - 1 file(s) parsed into 1 group(s) with 1 call(s) to setId in 52ms. (54ms total) [0 unknowns] | |
| 2016-06-26 07:32:51,724 747 [ main] INFO ome.formats.OMEROMetadataStoreClient - Attempting initial SSL connection to localhost:4064 | |
| 2016-06-26 07:32:52,132 1155 [ main] INFO ome.formats.OMEROMetadataStoreClient - Insecure connection requested, falling back | |
| 2016-06-26 07:32:52,335 1358 [ main] INFO ome.formats.OMEROMetadataStoreClient - Server: 5.3.0 | |
| 2016-06-26 07:32:52,336 1359 [ main] INFO ome.formats.OMEROMetadataStoreClient - Client: 5.3.0-m2-763-9f57b02-ice36-b1 | |
| 2016-06-26 07:32:52,336 1359 [ main] INFO ome.formats.OMEROMetadataStoreClient - Java Version: 1.8.0_92 | |
| 2016-06-26 07:32:52,336 1359 [ main] INFO ome.formats.OMEROMetadataStoreClient - OS Name: Linux | |
| 2016-06-26 07:32:52,336 1359 [ main] INFO ome.formats.OMEROMetadataStoreClient - OS Arch: amd64 | |
| 2016-06-26 07:32:52,336 1359 [ main] INFO ome.formats.OMEROMetadataStoreClient - OS Version: 3.10.0-327.13.1.el7.x86_64 | |
| 2016-06-26 07:32:52,402 1425 [ main] INFO ormats.importer.cli.LoggingImportMonitor - FILESET_UPLOAD_PREPARATION | |
| 2016-06-26 07:32:52,652 1675 [ main] INFO ormats.importer.cli.LoggingImportMonitor - FILESET_UPLOAD_START | |
| 2016-06-26 07:32:52,663 1686 [ main] INFO ts.importer.transfers.UploadFileTransfer - Transferring /home/omero/workspace/OMERO-server/test.dv... | |
| 2016-06-26 07:32:52,694 1717 [ main] INFO ormats.importer.cli.LoggingImportMonitor - FILE_UPLOAD_STARTED: /home/omero/workspace/OMERO-server/test.dv | |
| 2016-06-26 07:32:54,816 3839 [ main] INFO ormats.importer.cli.LoggingImportMonitor - FILE_UPLOAD_COMPLETE: /home/omero/workspace/OMERO-server/test.dv | |
| 2016-06-26 07:32:55,502 4525 [ main] INFO ormats.importer.cli.LoggingImportMonitor - FILESET_UPLOAD_END | |
| 2016-06-26 07:32:55,569 4592 [ main] INFO ormats.importer.cli.LoggingImportMonitor - IMPORT_STARTED Logfile: 51 | |
| 2016-06-26 07:32:55,829 4852 [l.Client-1] INFO ormats.importer.cli.LoggingImportMonitor - METADATA_IMPORTED Step: 1 of 5 Logfile: 51 | |
| 2016-06-26 07:32:58,004 7027 [l.Client-0] INFO ormats.importer.cli.LoggingImportMonitor - PIXELDATA_PROCESSED Step: 2 of 5 Logfile: 51 | |
| 2016-06-26 07:32:58,164 7187 [l.Client-1] INFO ormats.importer.cli.LoggingImportMonitor - THUMBNAILS_GENERATED Step: 3 of 5 Logfile: 51 | |
| 2016-06-26 07:32:58,186 7209 [l.Client-0] INFO ormats.importer.cli.LoggingImportMonitor - METADATA_PROCESSED Step: 4 of 5 Logfile: 51 | |
| 2016-06-26 07:32:58,204 7227 [l.Client-1] INFO ormats.importer.cli.LoggingImportMonitor - OBJECTS_RETURNED Step: 5 of 5 Logfile: 51 | |
| 2016-06-26 07:32:58,341 7364 [l.Client-0] INFO ormats.importer.cli.LoggingImportMonitor - IMPORT_DONE Imported file: /home/omero/workspace/OMERO-server/test.dv | |
| Imported pixels: | |
| 3 | |
| Other imported objects: | |
| Fileset:3 | |
| Image:3 | |
| 2016-06-26 07:32:58,342 7365 [l.Client-0] INFO ome.formats.importer.cli.ErrorHandler - Number of errors: 0 | |
| ==> Summary | |
| 1 file uploaded, 1 fileset created, 1 image imported, 0 errors in 0:00:05.946 | |
| !! 06/26/16 07:32:58.464 error: 2 communicators not destroyed during global destruction.+ /home/omero/workspace/OMERO-server/OMERO.server/bin/omero import /home/omero/workspace/OMERO-server/test.dv -g testprv -u user-2 -w ome -s localhost -p 4064 | |
| Skipped session b2c885eb-28d1-4b64-a1f8-6c8d1f4684b3 due to property conflicts: omero.group: None!=testprv | |
| Skipped session f71d8a25-b874-4211-aef3-d5daa3f83136 due to property conflicts: omero.group: testgroup!=testprv | |
| Created session c2ad7fc2-f963-4d47-8857-c0da21eeb348 (user-2@localhost:4064). Idle timeout: 10 min. Current group: testprv | |
| 2016-06-26 07:32:59,433 198 [ main] INFO ome.formats.importer.ImportConfig - OMERO Version: 5.3.0-m2-763-9f57b02-ice36-b1 | |
| 2016-06-26 07:32:59,445 210 [ main] INFO ome.formats.importer.ImportConfig - Bioformats version: 5.2.0-m4 revision: f08759bccdfe9058935fc0d93d7897dfb3cf7bf4 date: 23 June 2016 | |
| 2016-06-26 07:32:59,477 242 [ main] INFO formats.importer.cli.CommandLineImporter - Log levels -- Bio-Formats: ERROR OMERO.importer: INFO | |
| 2016-06-26 07:32:59,740 505 [ main] INFO ome.formats.importer.ImportCandidates - Depth: 4 Metadata Level: MINIMUM | |
| 2016-06-26 07:32:59,796 561 [ main] INFO ome.formats.importer.ImportCandidates - 1 file(s) parsed into 1 group(s) with 1 call(s) to setId in 54ms. (56ms total) [0 unknowns] | |
| 2016-06-26 07:32:59,966 731 [ main] INFO ome.formats.OMEROMetadataStoreClient - Attempting initial SSL connection to localhost:4064 | |
| 2016-06-26 07:33:00,386 1151 [ main] INFO ome.formats.OMEROMetadataStoreClient - Insecure connection requested, falling back | |
| 2016-06-26 07:33:00,596 1361 [ main] INFO ome.formats.OMEROMetadataStoreClient - Server: 5.3.0 | |
| 2016-06-26 07:33:00,596 1361 [ main] INFO ome.formats.OMEROMetadataStoreClient - Client: 5.3.0-m2-763-9f57b02-ice36-b1 | |
| 2016-06-26 07:33:00,596 1361 [ main] INFO ome.formats.OMEROMetadataStoreClient - Java Version: 1.8.0_92 | |
| 2016-06-26 07:33:00,596 1361 [ main] INFO ome.formats.OMEROMetadataStoreClient - OS Name: Linux | |
| 2016-06-26 07:33:00,596 1361 [ main] INFO ome.formats.OMEROMetadataStoreClient - OS Arch: amd64 | |
| 2016-06-26 07:33:00,596 1361 [ main] INFO ome.formats.OMEROMetadataStoreClient - OS Version: 3.10.0-327.13.1.el7.x86_64 | |
| 2016-06-26 07:33:00,671 1436 [ main] INFO ormats.importer.cli.LoggingImportMonitor - FILESET_UPLOAD_PREPARATION | |
| 2016-06-26 07:33:00,931 1696 [ main] INFO ormats.importer.cli.LoggingImportMonitor - FILESET_UPLOAD_START | |
| 2016-06-26 07:33:00,939 1704 [ main] INFO ts.importer.transfers.UploadFileTransfer - Transferring /home/omero/workspace/OMERO-server/test.dv... | |
| 2016-06-26 07:33:00,961 1726 [ main] INFO ormats.importer.cli.LoggingImportMonitor - FILE_UPLOAD_STARTED: /home/omero/workspace/OMERO-server/test.dv | |
| 2016-06-26 07:33:03,229 3994 [ main] INFO ormats.importer.cli.LoggingImportMonitor - FILE_UPLOAD_COMPLETE: /home/omero/workspace/OMERO-server/test.dv | |
| 2016-06-26 07:33:03,891 4656 [ main] INFO ormats.importer.cli.LoggingImportMonitor - FILESET_UPLOAD_END | |
| 2016-06-26 07:33:03,952 4717 [ main] INFO ormats.importer.cli.LoggingImportMonitor - IMPORT_STARTED Logfile: 54 | |
| 2016-06-26 07:33:04,201 4966 [l.Client-1] INFO ormats.importer.cli.LoggingImportMonitor - METADATA_IMPORTED Step: 1 of 5 Logfile: 54 | |
| 2016-06-26 07:33:06,353 7118 [l.Client-0] INFO ormats.importer.cli.LoggingImportMonitor - PIXELDATA_PROCESSED Step: 2 of 5 Logfile: 54 | |
| 2016-06-26 07:33:06,518 7283 [l.Client-1] INFO ormats.importer.cli.LoggingImportMonitor - THUMBNAILS_GENERATED Step: 3 of 5 Logfile: 54 | |
| 2016-06-26 07:33:06,544 7309 [l.Client-1] INFO ormats.importer.cli.LoggingImportMonitor - METADATA_PROCESSED Step: 4 of 5 Logfile: 54 | |
| 2016-06-26 07:33:06,561 7326 [l.Client-0] INFO ormats.importer.cli.LoggingImportMonitor - OBJECTS_RETURNED Step: 5 of 5 Logfile: 54 | |
| 2016-06-26 07:33:06,704 7469 [l.Client-0] INFO ormats.importer.cli.LoggingImportMonitor - IMPORT_DONE Imported file: /home/omero/workspace/OMERO-server/test.dv | |
| Imported pixels: | |
| 4 | |
| Other imported objects: | |
| Fileset:4 | |
| Image:4 | |
| 2016-06-26 07:33:06,705 7470 [l.Client-0] INFO ome.formats.importer.cli.ErrorHandler - Number of errors: 0 | |
| ==> Summary | |
| 1 file uploaded, 1 fileset created, 1 image imported, 0 errors in 0:00:06.040 | |
| !! 06/26/16 07:33:06.823 error: 2 communicators not destroyed during global destruction.+ echo 'put testgroup in the share' | |
| put testgroup in the share | |
| + curl -o /home/omero/workspace/OMERO-server/createshare.py https://gist.githubusercontent.com/aleksandra-tarkowska/07c7ebcf9ed564623605dd4ca6cdb56a/raw/4d82d4645724cb6af6ed188bde0d78fc646a9d5a/share-group.py | |
| % Total % Received % Xferd Average Speed Time Time Time Current | |
| Dload Upload Total Spent Left Speed | |
| 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 | |
| 100 560 100 560 0 0 1666 0 --:--:-- --:--:-- --:--:-- 1671 | |
| + PYTHONPATH=/home/omero/workspace/OMERO-server/OMERO.server/lib/python: | |
| + python /home/omero/workspace/OMERO-server/createshare.py | |
| Share ID: 30 |
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