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September 15, 2016 17:32
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Obtain discovery dates for all confirmed exoplanets in the NASA Exoplanet Archive
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"""Obtain discovery dates for all confirmed exoplanets. | |
This script combines the NASA Exoplanet Archive and ADS API to obtain the | |
publication date for the discovery paper of all the confirmed exoplanets. | |
Author: Geert Barentsen | |
""" | |
import requests | |
import pandas as pd | |
# Configure your personal ADS API key below | |
ADS_TOKEN = open('/home/gb/.ads/dev_key', 'r').readlines()[0].strip() | |
# Extract the discovery bibcode for all confirmed exoplanets in the archive | |
planets = pd.read_csv('nexsci-confirmed-planets-20160913.csv') | |
bibcodes = [] | |
for ref in planets.pl_disc_reflink: | |
if 'bibcode' in ref: | |
bibcode = ref.split('bibcode=')[1].split(' ')[0] | |
elif '/abs/' in ref: | |
bibcode = ref.split('/abs/')[1].split(' ')[0] | |
bibcodes.append(bibcode) | |
planets['discovery_bibcode'] = bibcodes | |
# Fetch the publication date for these bibcodes from the ADS API | |
query_data = "bibcode\n"+"\n".join(planets['discovery_bibcode'].unique()) | |
r = requests.post('https://api.adsabs.harvard.edu/v1/search/bigquery', | |
params={'q': '*:*', 'wt': 'json', 'fq': '{!bitset}', | |
'fl': 'bibcode,pubdate', 'rows': 2*len(bibcodes)}, | |
headers={'Authorization': 'Bearer ' + ADS_TOKEN}, | |
data=query_data) | |
ads_response = pd.DataFrame(r.json()['response']['docs']) | |
# Merge the discovery dates with the original exoplanet archive table | |
planets_with_discovery_dates = planets.merge(ads_response, | |
left_on='discovery_bibcode', | |
right_on='bibcode') | |
planets_with_discovery_dates.to_csv('planets-with-discovery_dates.csv') |
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