Install conda with correct quantumtinkerer environments

install_conda_hpc05.sh

#/bin/bash

# run this script with:
# nohup ~/Work/install_conda.sh > /dev/null 2>&1 &

export CONDA_DIR="${HOME}/miniconda3"

# Create a temporary folder
mkdir -p ~/tmp && cd ~/tmp

# Remove the old miniconda
rm -fr $CONDA_DIR && mkdir -p $CONDA_DIR

# Download miniconda
wget --quiet https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh

# Install Miniconda and add channels
/bin/bash Miniconda3-latest-Linux-x86_64.sh -f -b -p $CONDA_DIR
$CONDA_DIR/bin/conda config --system --add channels conda-forge
$CONDA_DIR/bin/conda config --system --set auto_update_conda false

# Clone quantum-tinkerer/research-docker to get the latest envs.yml
git clone https://github.com/quantum-tinkerer/research-docker.git

# Update the root environment
$CONDA_DIR/bin/conda env update -n root -f research-docker/python3.yml

# Add a dev environment (e.g. with dev kwant and holoviews)
$CONDA_DIR/bin/conda env create -p $CONDA_DIR/envs/dev -f research-docker/dev.yml

# Cleanup
$CONDA_DIR/bin/conda clean -tipsy
rm -fr ~/tmp