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Reading an RDF/XML file with Raptor
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#define SBOL_URI "http://sbolstandard.org/v2" | |
static void | |
print_triple(void* user_data, raptor_statement* triple) | |
{ | |
raptor_statement_print_as_ntriples(triple, stdout); | |
fputc('\n', stdout); | |
} | |
void Document::read(std::string filename) | |
{ | |
FILE* fh = fopen(filename.c_str(), "rb"); | |
raptor_parser* rdf_parser = raptor_new_parser(this->rdf_graph, "rdfxml"); | |
raptor_iostream* ios = raptor_new_iostream_to_file_handle(this->rdf_graph, fh); | |
raptor_parser_set_statement_handler(rdf_parser, NULL, print_triple); | |
raptor_uri *sbol_uri = raptor_new_uri(this->rdf_graph, (const unsigned char *)SBOL_URI "#"); | |
raptor_parser_parse_iostream(rdf_parser, ios, sbol_uri); | |
raptor_free_parser(rdf_parser); | |
raptor_free_uri(sbol_uri); | |
} |
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<?xml version="1.0" encoding="utf-8"?> | |
<rdf:RDF xmlns:dcterms="http://purl.org/dc/terms/#" | |
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" | |
xmlns:sbol="http://sbolstandard.org/v2#"> | |
<sbol:Identified rdf:about="http://examples.com/Identified/0"> | |
<sbol:identity>http://examples.com/Identified/0</sbol:identity> | |
<sbol:persistentIdentity>http://sbolstandard.org/v2/Identified/example</sbol:persistentIdentity> | |
</sbol:Identified> | |
<sbol:ComponentDefinition rdf:about="http://examples.com/cdef_obj"> | |
<dcterms:description></dcterms:description> | |
<dcterms:title></dcterms:title> | |
<sbol:displayId>cdef_obj</sbol:displayId> | |
<sbol:identity>http://examples.com/cdef_obj</sbol:identity> | |
<sbol:persistentIdentity>http://examples.com/cdef_obj</sbol:persistentIdentity> | |
<sbol:type>SO_0000001</sbol:type> | |
<rdf:type rdf:resource="http://sbolstandard.org/v2#sequenceAnnotation"/> | |
</sbol:ComponentDefinition> | |
<sbol:ComponentDefinition rdf:about="http://sbolstandard.org/v2/ComponentDefinition/example"> | |
<dcterms:description></dcterms:description> | |
<dcterms:title></dcterms:title> | |
<sbol:displayId>example</sbol:displayId> | |
<sbol:identity>http://sbolstandard.org/v2/ComponentDefinition/example</sbol:identity> | |
<sbol:persistentIdentity>http://sbolstandard.org/v2/ComponentDefinition/example</sbol:persistentIdentity> | |
<sbol:sequenceAnnotation rdf:resource="http://sbolstandard.org/v2/SequenceAnnotation/example"/> | |
<sbol:type>SO_0000001</sbol:type> | |
<rdf:type rdf:resource="http://sbolstandard.org/v2#sequenceAnnotation"/> | |
</sbol:ComponentDefinition> | |
<sbol:SequenceAnnotation rdf:about="http://sbolstandard.org/v2/SequenceAnnotation/example"> | |
<sbol:identity>http://sbolstandard.org/v2/SequenceAnnotation/example</sbol:identity> | |
<sbol:persistentIdentity>http://sbolstandard.org/v2/SequenceAnnotation/example</sbol:persistentIdentity> | |
<sbol:start>10</sbol:start> | |
</sbol:SequenceAnnotation> | |
</rdf:RDF> |
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