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October 7, 2015 11:02
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SPAdes 3.6.1 Homebrew-science build error
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Bede$ brew install spades | |
==> Installing spades from homebrew/homebrew-science | |
==> Downloading https://homebrew.bintray.com/bottles-science/spades-3.6.1.yosemite.bottle.tar.gz | |
curl: (22) The requested URL returned error: 404 Not Found | |
Error: Failed to download resource "spades" | |
Download failed: https://homebrew.bintray.com/bottles-science/spades-3.6.1.yosemite.bottle.tar.gz | |
Warning: Bottle installation failed: building from source. | |
==> Downloading http://spades.bioinf.spbau.ru/release3.6.0/SPAdes-3.6.1.tar.gz | |
Already downloaded: /Library/Caches/Homebrew/spades-3.6.1.tar.gz | |
==> cmake .. -DCMAKE_C_FLAGS_RELEASE= -DCMAKE_CXX_FLAGS_RELEASE= -DCMAKE_INSTALL_PREFIX=/usr/local/Cellar/spades/3.6.1 -DCMAKE_BUILD_TYP | |
Last 15 lines from /Users/Bede/Library/Logs/Homebrew/spades/01.cmake: | |
-- Looking for stddef.h | |
-- Looking for stddef.h - found | |
-- Check size of void* | |
-- Check size of void* - done | |
-- Check size of malloc_zone_t | |
-- Check size of malloc_zone_t - failed | |
-- Check size of malloc_introspection_t | |
-- Check size of malloc_introspection_t - failed | |
CMake Error at /tmp/spades20151007-48963-1fpmimk/SPAdes-3.6.1/ext/src/jemalloc/CMakeLists.txt:120 (message): | |
Unsupported malloc zone version | |
-- Configuring incomplete, errors occurred! | |
See also "/tmp/spades20151007-48963-1fpmimk/SPAdes-3.6.1/src/build/CMakeFiles/CMakeOutput.log". | |
See also "/tmp/spades20151007-48963-1fpmimk/SPAdes-3.6.1/src/build/CMakeFiles/CMakeError.log". | |
READ THIS: https://git.io/brew-troubleshooting | |
If reporting this issue please do so at (not Homebrew/homebrew): | |
https://github.com/homebrew/homebrew-science/issues |
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