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July 13, 2018 05:21
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Using Tidyverse to Query Structures in
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| library(tidyverse) | |
| library(igraph) | |
| g <- make_lattice(c(5, 5)) | |
| ego(g, order = 1, mindist = 1) | |
| head_of(g, E(g)) | |
| he <- ego(g, order = 1, mindist = 1, nodes = head_of(g, E(g))) | |
| te <- ego(g, order = 1, mindist = 1, nodes = tail_of(g, E(g))) | |
| thirdN <- map2(te, he, function(x, y){c(x,y) %>% unique %>% as.numeric()}) | |
| elSL <- as_data_frame(g) %>% | |
| as.tibble() %>% | |
| mutate(third = thirdN) %>% | |
| unnest() %>% | |
| filter(third != from, | |
| third != to) %>% | |
| mutate(fourth = ego(g, order = 1, mindist = 1, nodes = third) %>% | |
| map(as.numeric)) %>% | |
| unnest() %>% | |
| filter(fourth != from, | |
| fourth != to) %>% | |
| mutate(fifth = ego(g, order = 1, mindist = 1, nodes = fourth) %>% | |
| map(as.numeric)) %>% | |
| unnest() %>% | |
| filter(fifth != from, | |
| fifth != to, | |
| fifth != third) %>% | |
| apply(1, sort) %>% | |
| t %>% | |
| as.tibble() %>% | |
| distinct() %>% | |
| mutate_all(as.integer) | |
| elY <- as_data_frame(g) %>% | |
| as.tibble() %>% | |
| mutate(third = thirdN) %>% | |
| unnest() %>% | |
| filter(third != from, | |
| third != to) %>% | |
| { | |
| branch <<- ego(g, order = 1, mindist = 1, nodes = .$third) | |
| branchData <<- mutate(., fourth = branch %>% map(as.numeric)) | |
| branchData | |
| } %>% | |
| unnest() %>% | |
| filter(fourth != from, | |
| fourth != to) %>% | |
| left_join(rename(branchData, fifth = fourth)) %>% | |
| unnest() %>% | |
| filter(fifth != from, | |
| fifth != to, | |
| fifth != fourth) %>% | |
| apply(1, sort) %>% | |
| t %>% | |
| as.tibble() %>% | |
| distinct() %>% | |
| mutate_all(as.integer) %>% | |
| anti_join(elSL) | |
| elT <- as_data_frame(g) %>% | |
| as.tibble() %>% | |
| mutate(third = thirdN) %>% | |
| unnest %>% | |
| filter(third != from, | |
| third != to) %>% | |
| left_join(rename(., fourth = third)) %>% | |
| filter(fourth != third) %>% | |
| left_join(rename(., fifth = third) %>% select(-fourth)) %>% | |
| filter(fifth != third, | |
| fifth != fourth) %>% | |
| apply(1, sort) %>% | |
| t %>% | |
| as.tibble() %>% | |
| distinct() %>% | |
| anti_join(elSL) %>% | |
| anti_join(elY) %>% | |
| mutate_all(as.integer) | |
| set.seed(4) | |
| plot(g) | |
| saveGIF({ | |
| ani.options(interval = 0.2) | |
| for (i in seq_along(elY$V1)) { | |
| set.seed(5) | |
| plot(g, | |
| vertex.color = ifelse(V(g) %in% unlist(elY[i,]), 'skyblue', 'pink') | |
| ) | |
| title("All Y length 5") | |
| ani.pause() | |
| }}, movie.name = "Ylength5.gif", ani.width = 600, ani.height = 600) | |
| saveGIF({ | |
| ani.options(interval = 0.2) | |
| for (i in seq_along(elSL$V1)) { | |
| set.seed(5) | |
| plot(g, | |
| vertex.color = ifelse(V(g) %in% unlist(elSL[i,]), 'skyblue', 'pink') | |
| ) | |
| title("All Straight Line length 5") | |
| ani.pause() | |
| }}, movie.name = "SLlength5.gif", ani.width = 600, ani.height = 600) | |
| saveGIF({ | |
| ani.options(interval = 0.2) | |
| for (i in seq_along(elT$V1)) { | |
| set.seed(5) | |
| plot(g, | |
| vertex.color = ifelse(V(g) %in% unlist(elT[i,]), 'skyblue', 'pink') | |
| ) | |
| title("All T Line length 5") | |
| ani.pause() | |
| }}, movie.name = "Tlength5.gif", ani.width = 600, ani.height = 600) |
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