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Ben Fulcher benfulcher

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I use methods from physics and statistics to understand the structure and dynamics of complex systems like the brain

benfulcher / clusterReorderRows.m

Created July 24, 2019 00:39

Reorder rows of a matrix by hierarchical average linkage clustering on Euclidean distances

	function [dataMatrixClustered,dataMatrixNorm] = clusterReorderRows(dataMatrix)
	distanceMetric = 'Euclidean';
	linkageMethod = 'average';

	% Normalize columns:
	dataMatrixNorm = zscore(dataMatrix);

	% Pairwise distances:
	R = pdist(dataMatrix,distanceMetric);