I hereby claim:
- I am benjeffery on github.
- I am benjeffery (https://keybase.io/benjeffery) on keybase.
- I have a public key whose fingerprint is 1C75 E073 EDB5 D3D0 69FB 1D7A 22D6 43C3 578A A838
To claim this, I am signing this object:
Ben Jeffery benjeffery
benjeffery
/ gist:fe7727ae93bbe79fa5b3509428097465
Created
July 22, 2020 13:27
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| id site node time derived_state parent metadata | |
| 0 0 48 2.0800060772564484 1 -1 | |
| 1 0 48 2.0572024992858435 0 0 | |
| 2 0 31 1.5647409985500718 1 1 | |
| 3 0 31 1.0950830757849048 0 2 | |
| 4 0 23 0.46366628550498323 1 3 | |
| 5 0 23 0.3019074179902289 0 4 | |
| 6 0 7 0.0934323669836497 1 5 | |
| 7 0 7 0.04671618349182485 0 6 | |
| 8 0 5 0.0934323669836497 1 5 |
benjeffery
/ clang-tidy-errors
Created
May 18, 2020 23:32
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| /home/benj/projects/tskit/c/build/../tskit/convert.c:26:1: warning: #includes are not sorted properly [llvm-include-order] | |
| #include <stdio.h> | |
| ^ ~~~~~~~~~ | |
| <assert.h> | |
| /home/benj/projects/tskit/c/build/../tskit/convert.c:26:1: warning: #includes are not sorted properly [llvm-include-order] | |
| #include <stdio.h> | |
| ^ ~~~~~~~~~ | |
| <assert.h> | |
| /home/benj/projects/tskit/c/build/../tskit/core.c:26:1: warning: #includes are not sorted properly [llvm-include-order] | |
| #include <stdio.h> |
benjeffery
/ TSKIT Metadata handling.ipynb
Created
April 8, 2020 00:06
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| import itertools | |
| import sys | |
| from time import perf_counter | |
| from matplotlib import pyplot | |
| from scipy import stats | |
| import numpy as np | |
| import tqdm | |
| sys.path.append('/home/benj/projects/tskit/python') | |
| import tskit |
benjeffery
/ data.json
Last active
October 19, 2018 14:30
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| {"population":{"0":"WAF","1":"WAF","2":"WAF","3":"WAF","4":"WAF","5":"WAF","6":"WAF","7":"WAF","8":"WAF","9":"WAF","10":"WAF","14":"WAF","15":"WAF","17":"WAF","18":"WAF","19":"WAF","20":"WAF","21":"WAF","22":"WAF","25":"WAF","27":"WAF","30":"WAF","31":"WAF","33":"WAF","34":"WAF","37":"WAF","39":"WAF","40":"WAF","41":"WAF","44":"WAF","45":"WAF","46":"WAF","47":"WAF","48":"WAF","50":"WAF","51":"WAF","52":"WAF","53":"WAF","55":"WAF","56":"WAF","57":"WAF","58":"WAF","59":"WAF","60":"WAF","61":"WAF","63":"WAF","65":"WAF","66":"WAF","71":"WAF","76":"WAF","78":"WAF","79":"WAF","81":"WAF","82":"WAF","86":"WAF","89":"WAF","90":"WAF","91":"WAF","92":"WAF","93":"WAF","94":"WAF","95":"WAF","96":"WAF","98":"WAF","99":"WAF","101":"WAF","102":"WAF","104":"WAF","105":"WAF","106":"WAF","107":"WAF","108":"WAF","109":"WAF","112":"WAF","113":"WAF","114":"WAF","115":"WAF","116":"WAF","117":"WAF","118":"WAF","119":"WAF","125":"WAF","127":"WAF","131":"WAF","132":"WAF","134":"WAF","135":"WAF","136":"WAF","137":"WAF","139":"WAF","140 |
benjeffery
/ gist:c18271260bcfd8e9a929d39080297850
Last active
July 26, 2017 13:53
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| regions <--- THIS NEEDS POPULATING! | |
| id | |
| lat | |
| lng | |
| name | |
| description | |
| num_samples | |
| countries | |
| id |
benjeffery
/ gist:053bbf8a80b67df60971b3d9fba7246c
Created
June 22, 2017 11:58
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| accountsservice/xenial-updates,now 0.6.40-2ubuntu11.3 amd64 [installed] | |
| acl/xenial,now 2.2.52-3 amd64 [installed] | |
| acpi-support/xenial,now 0.142 amd64 [installed] | |
| acpid/xenial,now 1:2.0.26-1ubuntu2 amd64 [installed] | |
| add-apt-key/xenial,xenial,now 1.0-0.5 all [installed] | |
| adduser/xenial,xenial,now 3.113+nmu3ubuntu4 all [installed] | |
| adobe-flashplugin/now 1:20170214.1-0ubuntu0.16.04.1 amd64 [installed,upgradable to: 1:20170616.1-0ubuntu0.16.04.1] | |
| adwaita-icon-theme/sarah,sarah,now 3.18.0-2ubuntu3mint2 all [installed] | |
| adwaita-icon-theme-full/sarah,sarah,now 3.18.0-2ubuntu3mint2 all [installed] | |
| alsa-base/xenial,xenial,now 1.0.25+dfsg-0ubuntu5 all [installed] |
benjeffery
/ pixels.js
Created
July 25, 2016 16:20
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| function chooseMode(jsProps, cssProps) { | |
| if (cssProps.length == 0 && jsProps.length == 0) // IE <10, other early browser, no method works there. In Opera CSS works though | |
| return bowser.opera ? 'css' : 'warning'; | |
| if (cssProps.length == 0 && jsProps.length > 0) // IE >10 even EDGE... sigh | |
| return 'js'; | |
| if (cssProps.length == 1 && cssProps[0] == 'optimiseSpeed' && jsProps.length == 0) //A few earlier browsers report this prop, but it only works for images | |
| return 'warning'; | |
| if (_.includes(cssProps, '-webkit-optimize-contrast') || _.includes(cssProps, '-moz-crisp-edges') || _.includes(cssProps, 'crisp-edges') || _.includes(cssProps, 'pixelated')) { | |
| if (!bowser.check({chrome: "41"})) //Earlier chromes only support css on IMG | |
| return 'js'; |
benjeffery
/ keybase.md
Created
July 22, 2016 00:42
benjeffery
/ gist:289ae04eb7fbf3dbc735
Last active
November 13, 2015 13:46
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| import requests | |
| def dl(path, filename): | |
| try: | |
| r = requests.get(path, stream=True) | |
| if r.status_code == 200: | |
| with open(filename, 'wb') as f: | |
| for chunk in r: | |
| f.write(chunk) | |
| print "done", path |