Skip to content

Instantly share code, notes, and snippets.

@bgruening
Created February 3, 2015 16:05
Show Gist options
  • Save bgruening/d02650bd3153cdb6f474 to your computer and use it in GitHub Desktop.
Save bgruening/d02650bd3153cdb6f474 to your computer and use it in GitHub Desktop.
Galaxy API addition to relead a tool_data table.
diff -r eb26a9648323 lib/galaxy/webapps/galaxy/api/tool_data.py
--- a/lib/galaxy/webapps/galaxy/api/tool_data.py Tue Feb 03 09:00:51 2015 -0500
+++ b/lib/galaxy/webapps/galaxy/api/tool_data.py Tue Feb 03 16:52:38 2015 +0100
@@ -28,6 +28,19 @@
@web.require_admin
@expose_api
+ def reload( self, trans, id, **kwd ):
+ """
+ GET /api/tool_data/{id}/reload
+
+ Reloads a tool_data table.
+ """
+ decoded_tool_data_id = id
+ data_table = trans.app.tool_data_tables.data_tables.get(decoded_tool_data_id)
+ return data_table.reload_from_files()
+
+
+ @web.require_admin
+ @expose_api
def delete( self, trans, id, **kwd ):
"""
DELETE /api/tool_data/{id}
diff -r eb26a9648323 lib/galaxy/webapps/galaxy/buildapp.py
--- a/lib/galaxy/webapps/galaxy/buildapp.py Tue Feb 03 09:00:51 2015 -0500
+++ b/lib/galaxy/webapps/galaxy/buildapp.py Tue Feb 03 16:52:38 2015 +0100
@@ -174,6 +174,7 @@
webapp.mapper.resource( 'tool_data', 'tool_data', path_prefix='/api' )
webapp.mapper.connect( '/api/tool_data/{id:.+?}/fields/{value:.+?}/files/{path:.+?}', action='download_field_file', controller="tool_data" )
webapp.mapper.connect( '/api/tool_data/{id:.+?}/fields/{value:.+?}', action='show_field', controller="tool_data" )
+ webapp.mapper.connect( '/api/tool_data/{id:.+?}/reload', action='reload', controller="tool_data" )
webapp.mapper.resource( 'dataset_collection', 'dataset_collections', path_prefix='/api/')
webapp.mapper.resource( 'sample', 'samples', path_prefix='/api' )
webapp.mapper.resource( 'request', 'requests', path_prefix='/api' )
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment