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bhive01/cSegfault_R.txt

Created May 13, 2020 23:05
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cSegfault_R.txt
> moa %>%
+ render_html_reports(.)
processing file: PerTrialReportDev.Rmd
|...................................................... | 25%
|........................................................................................................... | 50%
|................................................................................................................................................................ | 75%
|......................................................................................................................................................................................................................| 100%
label: inputs (with options)
List of 7
$ message : logi FALSE
$ warning : logi FALSE
$ error : logi FALSE
$ fig.retina: logi TRUE
$ fig.height: num 7
$ fig.width : num 8
$ results : chr "asis"
Error: segfault from C stack overflow
> devtools::session_info()
─ Session info ───────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────
setting value
version R version 4.0.0 (2020-04-24)
os macOS Catalina 10.15.4
system x86_64, darwin17.0
ui AQUA
language (EN)
collate en_US.UTF-8
ctype en_US.UTF-8
tz America/Los_Angeles
date 2020-05-13
─ Packages ───────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────
package * version date lib source
acepack 1.4.1 2016-10-29 [1] CRAN (R 4.0.0)
agricolae * 1.3-2 2020-01-19 [1] CRAN (R 4.0.0)
AlgDesign 1.2.0 2019-11-29 [1] CRAN (R 4.0.0)
assertthat 0.2.1 2019-03-21 [1] CRAN (R 4.0.0)
backports 1.1.6 2020-04-05 [1] CRAN (R 4.0.0)
base64enc 0.1-3 2015-07-28 [1] CRAN (R 4.0.0)
broom * 0.5.6 2020-04-20 [1] CRAN (R 4.0.0)
callr 3.4.3 2020-03-28 [1] CRAN (R 4.0.0)
cellranger 1.1.0 2016-07-27 [1] CRAN (R 4.0.0)
checkmate 2.0.0 2020-02-06 [1] CRAN (R 4.0.0)
cli 2.0.2 2020-02-28 [1] CRAN (R 4.0.0)
cluster 2.1.0 2019-06-19 [1] CRAN (R 4.0.0)
codetools 0.2-16 2018-12-24 [1] CRAN (R 4.0.0)
colorspace 1.4-1 2019-03-18 [1] CRAN (R 4.0.0)
combinat 0.0-8 2012-10-29 [1] CRAN (R 4.0.0)
crayon 1.3.4 2017-09-16 [1] CRAN (R 4.0.0)
data.table 1.12.8 2019-12-09 [1] CRAN (R 4.0.0)
DBI 1.1.0 2019-12-15 [1] CRAN (R 4.0.0)
dbplyr 1.4.3 2020-04-19 [1] CRAN (R 4.0.0)
desc 1.2.0 2018-05-01 [1] CRAN (R 4.0.0)
devtools 2.3.0 2020-04-10 [1] CRAN (R 4.0.0)
digest 0.6.25 2020-02-23 [1] CRAN (R 4.0.0)
doParallel 1.0.15 2019-08-02 [1] CRAN (R 4.0.0)
dplyr * 0.8.99.9003 2020-05-12 [1] Github (tidyverse/dplyr@d2627f7)
ellipsis 0.3.0 2019-09-20 [1] CRAN (R 4.0.0)
evaluate 0.14 2019-05-28 [1] CRAN (R 4.0.0)
FactoMineR 2.3 2020-02-29 [1] CRAN (R 4.0.0)
fansi 0.4.1 2020-01-08 [1] CRAN (R 4.0.0)
farver 2.0.3 2020-01-16 [1] CRAN (R 4.0.0)
fastmap 1.0.1 2019-10-08 [1] CRAN (R 4.0.0)
flashClust 1.01-2 2012-08-21 [1] CRAN (R 4.0.0)
forcats * 0.5.0 2020-03-01 [1] CRAN (R 4.0.0)
foreach 1.5.0 2020-03-30 [1] CRAN (R 4.0.0)
foreign 0.8-78 2020-04-13 [1] CRAN (R 4.0.0)
Formula * 1.2-3 2018-05-03 [1] CRAN (R 4.0.0)
fs * 1.4.1.9000 2020-04-24 [1] Github (r-lib/fs@2c3024f)
generics 0.0.2 2018-11-29 [1] CRAN (R 4.0.0)
ggbiplot * 0.55 2020-04-30 [1] Github (vqv/ggbiplot@7325e88)
ggplot2 * 3.3.0.9000 2020-04-30 [1] Github (tidyverse/ggplot2@818cf80)
ggrepel 0.8.2 2020-03-08 [1] CRAN (R 4.0.0)
ggtext * 0.1.0 2020-04-24 [1] Github (wilkelab/ggtext@24e9cd0)
glue 1.4.0 2020-04-03 [1] CRAN (R 4.0.0)
gridExtra 2.3 2017-09-09 [1] CRAN (R 4.0.0)
gridtext 0.1.1 2020-02-24 [1] CRAN (R 4.0.0)
gtable 0.3.0 2019-03-25 [1] CRAN (R 4.0.0)
haven 2.2.0 2019-11-08 [1] CRAN (R 4.0.0)
here * 0.1-11 2020-04-24 [1] Github (r-lib/here@600002a)
highr 0.8 2019-03-20 [1] CRAN (R 4.0.0)
Hmisc * 4.4-0 2020-03-23 [1] CRAN (R 4.0.0)
hms 0.5.3 2020-01-08 [1] CRAN (R 4.0.0)
htmlTable 1.13.3 2019-12-04 [1] CRAN (R 4.0.0)
htmltools 0.4.0 2019-10-04 [1] CRAN (R 4.0.0)
htmlwidgets 1.5.1 2019-10-08 [1] CRAN (R 4.0.0)
httpuv 1.5.2 2019-09-11 [1] CRAN (R 4.0.0)
httr 1.4.1 2019-08-05 [1] CRAN (R 4.0.0)
iterators 1.0.12 2019-07-26 [1] CRAN (R 4.0.0)
janitor * 2.0.1.9000 2020-04-24 [1] Github (sfirke/janitor@15205dd)
jpeg 0.1-8.1 2019-10-24 [1] CRAN (R 4.0.0)
jsonlite 1.6.1 2020-02-02 [1] CRAN (R 4.0.0)
kableExtra * 1.1.0 2019-03-16 [1] CRAN (R 4.0.0)
klaR 0.6-15 2020-02-19 [1] CRAN (R 4.0.0)
knitr * 1.28 2020-02-06 [1] CRAN (R 4.0.0)
labeling 0.3 2014-08-23 [1] CRAN (R 4.0.0)
later 1.0.0 2019-10-04 [1] CRAN (R 4.0.0)
lattice * 0.20-41 2020-04-02 [1] CRAN (R 4.0.0)
latticeExtra 0.6-29 2019-12-19 [1] CRAN (R 4.0.0)
leaps 3.1 2020-01-16 [1] CRAN (R 4.0.0)
lifecycle 0.2.0 2020-03-06 [1] CRAN (R 4.0.0)
lubridate * 1.7.8 2020-04-06 [1] CRAN (R 4.0.0)
magrittr 1.5 2014-11-22 [1] CRAN (R 4.0.0)
markdown 1.1 2019-08-07 [1] CRAN (R 4.0.0)
MASS 7.3-51.5 2019-12-20 [1] CRAN (R 4.0.0)
Matrix 1.2-18 2019-11-27 [1] CRAN (R 4.0.0)
memoise 1.1.0 2017-04-21 [1] CRAN (R 4.0.0)
mgcv 1.8-31 2019-11-09 [1] CRAN (R 4.0.0)
mice 3.8.0 2020-02-21 [1] CRAN (R 4.0.0)
mime 0.9 2020-02-04 [1] CRAN (R 4.0.0)
miniUI 0.1.1.1 2018-05-18 [1] CRAN (R 4.0.0)
missMDA * 1.16 2020-01-17 [1] CRAN (R 4.0.0)
modelr 0.1.6 2020-02-22 [1] CRAN (R 4.0.0)
munsell 0.5.0 2018-06-12 [1] CRAN (R 4.0.0)
mvtnorm 1.1-0 2020-02-24 [1] CRAN (R 4.0.0)
nlme 3.1-147 2020-04-13 [1] CRAN (R 4.0.0)
nnet 7.3-13 2020-02-25 [1] CRAN (R 4.0.0)
openxlsx * 4.1.4 2019-12-06 [1] CRAN (R 4.0.0)
patchwork * 1.0.0.9000 2020-04-24 [1] Github (thomasp85/patchwork@012fb8b)
pillar 1.4.4 2020-05-05 [1] CRAN (R 4.0.0)
pkgbuild 1.0.7 2020-04-25 [1] CRAN (R 4.0.0)
pkgconfig 2.0.3 2019-09-22 [1] CRAN (R 4.0.0)
pkgload 1.0.2 2018-10-29 [1] CRAN (R 4.0.0)
plyr * 1.8.6 2020-03-03 [1] CRAN (R 4.0.0)
png 0.1-7 2013-12-03 [1] CRAN (R 4.0.0)
prettyunits 1.1.1 2020-01-24 [1] CRAN (R 4.0.0)
processx 3.4.2 2020-02-09 [1] CRAN (R 4.0.0)
promises 1.1.0 2019-10-04 [1] CRAN (R 4.0.0)
ps 1.3.2 2020-02-13 [1] CRAN (R 4.0.0)
purrr * 0.3.4 2020-04-17 [1] CRAN (R 4.0.0)
questionr 0.7.0 2018-11-26 [1] CRAN (R 4.0.0)
R6 2.4.1 2019-11-12 [1] CRAN (R 4.0.0)
RColorBrewer 1.1-2 2014-12-07 [1] CRAN (R 4.0.0)
Rcpp 1.0.4.6 2020-04-09 [1] CRAN (R 4.0.0)
readr * 1.3.1 2018-12-21 [1] CRAN (R 4.0.0)
readxl * 1.3.1 2019-03-13 [1] CRAN (R 4.0.0)
remotes 2.1.1 2020-02-15 [1] CRAN (R 4.0.0)
reprex 0.3.0 2019-05-16 [1] CRAN (R 4.0.0)
rlang 0.4.6.9000 2020-05-12 [1] Github (r-lib/rlang@4bea875)
rmarkdown 2.1 2020-01-20 [1] CRAN (R 4.0.0)
rpart 4.1-15 2019-04-12 [1] CRAN (R 4.0.0)
rprojroot 1.3-2 2018-01-03 [1] CRAN (R 4.0.0)
rstudioapi 0.11 2020-02-07 [1] CRAN (R 4.0.0)
rvest 0.3.5 2019-11-08 [1] CRAN (R 4.0.0)
scales * 1.1.0 2019-11-18 [1] CRAN (R 4.0.0)
scatterplot3d 0.3-41 2018-03-14 [1] CRAN (R 4.0.0)
sessioninfo 1.1.1 2018-11-05 [1] CRAN (R 4.0.0)
shiny 1.4.0.2 2020-03-13 [1] CRAN (R 4.0.0)
snakecase 0.11.0 2019-05-25 [1] CRAN (R 4.0.0)
stringi 1.4.6 2020-02-17 [1] CRAN (R 4.0.0)
stringr * 1.4.0 2019-02-10 [1] CRAN (R 4.0.0)
survival * 3.1-12 2020-04-10 [1] CRAN (R 4.0.0)
testthat 2.3.2 2020-03-02 [1] CRAN (R 4.0.0)
tibble * 3.0.1 2020-04-20 [1] CRAN (R 4.0.0)
tidyr * 1.0.3.9000 2020-05-13 [1] Github (tidyverse/tidyr@b96be40)
tidyselect 1.1.0 2020-05-11 [1] CRAN (R 4.0.0)
tidyverse * 1.3.0.9000 2020-04-24 [1] Github (tidyverse/tidyverse@1d7f9b7)
usethis 1.6.0 2020-04-09 [1] CRAN (R 4.0.0)
utf8 1.1.4 2018-05-24 [1] CRAN (R 4.0.0)
vctrs 0.3.0.9000 2020-05-12 [1] Github (r-lib/vctrs@4ff6b79)
viridis * 0.5.1 2018-03-29 [1] CRAN (R 4.0.0)
viridisLite * 0.3.0 2018-02-01 [1] CRAN (R 4.0.0)
webshot 0.5.2 2019-11-22 [1] CRAN (R 4.0.0)
withr 2.2.0 2020-04-20 [1] CRAN (R 4.0.0)
xfun 0.13 2020-04-13 [1] CRAN (R 4.0.0)
xml2 1.3.2 2020-04-23 [1] CRAN (R 4.0.0)
xtable 1.8-4 2019-04-21 [1] CRAN (R 4.0.0)
yaml 2.2.1 2020-02-01 [1] CRAN (R 4.0.0)
zip 2.0.4 2019-09-01 [1] CRAN (R 4.0.0)
[1] /Library/Frameworks/R.framework/Versions/4.0/Resources/library
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