Created
March 22, 2022 09:52
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streaming feather files
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import time | |
import sys | |
import itertools | |
import os | |
import numpy as np | |
import pandas as pd | |
import pyarrow as pa | |
import psutil | |
nrows = 512**2 | |
ncols = 32 | |
nbatches = int(sys.argv[1]) | |
batch_size = nrows // nbatches | |
print(f"{nbatches} batches of {batch_size} rows") | |
process = psutil.Process(os.getpid()) | |
previous_mem = 0 | |
def pmem(msg): | |
global previous_mem | |
current_mem = process.memory_info().rss // 1024 | |
print(f"{msg}: {current_mem - previous_mem:+d}kb") | |
previous_mem = current_mem | |
def generate_rows(): | |
for i in range(nrows): | |
yield {f"col{j}": np.random.randn() for j in range(ncols)} | |
def chunked_iterable(iterable, size): | |
it = iter(iterable) | |
while True: | |
chunk = tuple(itertools.islice(it, size)) | |
if not chunk: | |
break | |
yield chunk | |
def write(rows, schema): | |
batches = chunked_iterable(rows, batch_size) | |
options = pa.ipc.IpcWriteOptions(compression='zstd', use_threads=True) | |
with pa.OSFile('test.feather', 'wb') as sink: | |
with pa.ipc.new_file(sink, schema, options=options) as writer: | |
for i, batch in enumerate(batches): | |
batch_data = list(batch) | |
b = pa.RecordBatch.from_pylist(batch_data, schema) | |
writer.write(b) | |
pmem(f"{i} {len(batch_data)}") | |
previous_mem = process.memory_info().rss // 1024 | |
schema = pa.schema([pa.field(f"col{i}", pa.float64()) for i in range(ncols)]) | |
rows = generate_rows() | |
write(rows, schema) | |
df = pd.read_feather('test.feather') | |
pmem("post-read") |
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does this allow u to progressively write to feather files?