bionode-ncbi search assembly Guillardia theta on 2014-07-11

2014-07-11_assembly-Guillardia_theta

{
   "coverage" : "0",
   "wgs" : "AEIE01",
   "seqreleasedate" : "2012/12/05 00:00",
   "speciesname" : "Guillardia theta",
   "meta" : {
      "assembly-status" : "Scaffold",
      "FtpSites" : {
         "FtpPath" : {
            "type" : "GenBank",
            "_" : "ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/protozoa/Guillardia_theta/Guith1/"
         }
      },
      "submitter-organization" : "JGI",
      "assembly-level" : "2",
      "representative-status" : "representative-genome",
      "Stats" : {
         "Stat" : [
            {
               "sequence_tag" : "all",
               "category" : "alt_loci_count",
               "_" : "0"
            },
            {
               "sequence_tag" : "all",
               "category" : "chromosome_count",
               "_" : "0"
            },
            {
               "sequence_tag" : "all",
               "category" : "contig_count",
               "_" : "5126"
            },
            {
               "sequence_tag" : "all",
               "category" : "contig_l50",
               "_" : "587"
            },
            {
               "sequence_tag" : "all",
               "category" : "contig_n50",
               "_" : "40445"
            },
            {
               "sequence_tag" : "all",
               "category" : "non_chromosome_replicon_count",
               "_" : "0"
            },
            {
               "sequence_tag" : "all",
               "category" : "replicon_count",
               "_" : "0"
            },
            {
               "sequence_tag" : "all",
               "category" : "scaffold_count",
               "_" : "669"
            },
            {
               "sequence_tag" : "placed",
               "category" : "scaffold_count",
               "_" : "0"
            },
            {
               "sequence_tag" : "unlocalized",
               "category" : "scaffold_count",
               "_" : "0"
            },
            {
               "sequence_tag" : "unplaced",
               "category" : "scaffold_count",
               "_" : "669"
            },
            {
               "sequence_tag" : "all",
               "category" : "scaffold_l50",
               "_" : "52"
            },
            {
               "sequence_tag" : "all",
               "category" : "scaffold_n50",
               "_" : "545808"
            },
            {
               "sequence_tag" : "all",
               "category" : "total_length",
               "_" : "87145349"
            },
            {
               "sequence_tag" : "all",
               "category" : "ungapped_length",
               "_" : "83457412"
            }
         ]
      }
   },
   "taxid" : "905079",
   "asmupdatedate" : "2014/04/22 00:00",
   "biosampleaccn" : "",
   "speciestaxid" : "55529",
   "rs_projects" : [
      "223305"
   ],
   "uid" : "503988",
   "asmreleasedate" : "2012/12/06 00:00",
   "gbuid" : "503988",
   "synonym" : {
      "similarity" : "identical",
      "refseq" : "GCF_000315625.1",
      "genbank" : "GCA_000315625.1"
   },
   "assemblystatus" : "Scaffold",
   "anomalouslist" : [],
   "chainid" : "315625",
   "gb_bioprojects" : [
      {
         "bioprojectid" : 53577,
         "bioprojectaccn" : "PRJNA53577"
      }
   ],
   "primary" : "1011598",
   "refseq_category" : "representative-genome",
   "rsuid" : "1011608",
   "ncbireleasedate" : "2012/12/06 00:00",
   "gb_projects" : [
      "53577"
   ],
   "rs_bioprojects" : [
      {
         "bioprojectid" : 223305,
         "bioprojectaccn" : "PRJNA223305"
      }
   ],
   "organism" : "Guillardia theta CCMP2712",
   "assemblyaccession" : "GCF_000315625.1",
   "biosampleid" : "",
   "submissiondate" : "2012/12/05 00:00",
   "ucscname" : "",
   "assemblyclass" : "haploid",
   "sortorder" : "2C50003156259898",
   "assemblydescription" : "",
   "releaselevel" : "Major",
   "propertylist" : [
      "default",
      "full-genome-representation",
      "latest",
      "latest_genbank",
      "latest_refseq",
      "representative",
      "species-default",
      "wgs"
   ],
   "ensemblname" : "",
   "partialgenomerepresentation" : "false",
   "assemblyname" : "Guith1",
   "biosource" : {
      "isolate" : "",
      "infraspecieslist" : [
         {
            "sub_value" : "CCMP2712",
            "sub_type" : "strain"
         }
      ],
      "sex" : ""
   },
   "submitterorganization" : "JGI",
   "lastupdatedate" : "2014/04/22 00:00"
}