Created
June 22, 2023 20:57
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ImageJ2 script to perform an operation over the rows of a dataset
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#@ Dataset img | |
/** | |
* Perform an operation on every row of the input image. | |
* | |
* This sets every pixel in the first row to have value zero, | |
* the second row will have value one, etc. | |
* | |
* https://forum.image.sc/t/best-way-to-iterate-over-columns-rows/82472 | |
*/ | |
// number of rows = length in the y-dimension | |
nrows = img.dimension(1); | |
// value starts at zero | |
value = Util.getTypeFromInterval(img); | |
for( long r = 0; r < nrows; r++ ) { | |
// get the rth row of the image | |
rowImage = Views.hyperSlice( img, 1, r ) | |
// set every pixel in the row to value | |
rowImage.forEach( x -> { | |
x.set(value); | |
}); | |
// increment value (value = value + 1) | |
value.inc(); | |
} | |
import net.imglib2.view.Views; | |
import net.imglib2.util.Util; |
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