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@brianv0
Created September 11, 2019 01:07
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ip_diffm build log
[2019-09-11T00:41:14.829895Z] + . /scratch/bvan/conda/envs/default/opt/eups/bin/setups.sh
[2019-09-11T00:41:14.829985Z] ++ export EUPS_SHELL=sh
[2019-09-11T00:41:14.829993Z] ++ EUPS_SHELL=sh
[2019-09-11T00:41:14.829996Z] ++ export EUPS_DIR=/scratch/bvan/conda/envs/default/opt/eups
[2019-09-11T00:41:14.830001Z] ++ EUPS_DIR=/scratch/bvan/conda/envs/default/opt/eups
[2019-09-11T00:41:14.830430Z] +++ echo /scratch/bvan/conda/envs/default/opt/eups
[2019-09-11T00:41:14.830445Z] +++ sed -e 's/ /-+-/g'
[2019-09-11T00:41:14.831603Z] ++ eupslocalpath=/scratch/bvan/conda/envs/default/opt/eups
[2019-09-11T00:41:14.831851Z] +++ /scratch/bvan/conda/envs/default/bin/python -E -c '
[2019-09-11T00:41:14.831860Z] from __future__ import print_function
[2019-09-11T00:41:14.831863Z] import sys
[2019-09-11T00:41:14.831865Z] pp = []
[2019-09-11T00:41:14.831881Z] for d in sys.argv[1].split(":"):
[2019-09-11T00:41:14.831885Z] if d and d not in pp:
[2019-09-11T00:41:14.831887Z] pp += [d]
[2019-09-11T00:41:14.831889Z] if not sys.argv[2] in pp:
[2019-09-11T00:41:14.831891Z] pp = [sys.argv[2]] + pp
[2019-09-11T00:41:14.831910Z] print(":".join(pp))' /scratch/bvan/conda/envs/default/share/eups /scratch/bvan/conda/envs/default/share/eups
[2019-09-11T00:41:14.850737Z] ++ export EUPS_PATH=/scratch/bvan/conda/envs/default/share/eups
[2019-09-11T00:41:14.850770Z] ++ EUPS_PATH=/scratch/bvan/conda/envs/default/share/eups
[2019-09-11T00:41:14.850805Z] ++ _eups_path=/scratch/bvan/conda/envs/default/share/eups
[2019-09-11T00:41:14.851220Z] +++ /scratch/bvan/conda/envs/default/opt/eups/bin/eups_setup DYLD_LIBRARY_PATH= eups -r /scratch/bvan/conda/envs/default/opt/eups
[2019-09-11T00:41:14.940786Z] ++ eval export 'SETUP_EUPS='\''eups' LOCAL:/scratch/bvan/conda/envs/default/opt/eups -f Linux64 -Z '(none)'\'';' 'setup()' '{' eval '`"/scratch/bvan/conda/envs/default/opt/eups/bin/eups_setup"' 'DYLD_LIBRARY_PATH="${DYLD_LIBRARY_PATH}"' '"$@"`' ';' '};' 'unsetup()' '{' eval '`"/scratch/bvan/conda/envs/default/opt/eups/bin/eups_setup"' 'DYLD_LIBRARY_PATH="${DYLD_LIBRARY_PATH}"' --unsetup '"$@"`' ';' '}'
[2019-09-11T00:41:14.940813Z] +++ export 'SETUP_EUPS=eups LOCAL:/scratch/bvan/conda/envs/default/opt/eups -f Linux64 -Z (none)'
[2019-09-11T00:41:14.940820Z] +++ SETUP_EUPS='eups LOCAL:/scratch/bvan/conda/envs/default/opt/eups -f Linux64 -Z (none)'
[2019-09-11T00:41:14.940823Z] ++ export 'SETUP_EUPS=eups LOCAL:/scratch/bvan/conda/envs/default/opt/eups -f (none) -Z (none)'
[2019-09-11T00:41:14.940830Z] ++ SETUP_EUPS='eups LOCAL:/scratch/bvan/conda/envs/default/opt/eups -f (none) -Z (none)'
[2019-09-11T00:41:14.940833Z] ++ export EUPS_PATH=/scratch/bvan/conda/envs/default/share/eups
[2019-09-11T00:41:14.940836Z] ++ EUPS_PATH=/scratch/bvan/conda/envs/default/share/eups
[2019-09-11T00:41:14.940838Z] ++ unset eupslocalpath _eups_path
[2019-09-11T00:41:14.940841Z] ++ '[' X '!=' X -a -f /scratch/bvan/conda/envs/default/opt/eups/etc/bash_completion.d/eups ']'
[2019-09-11T00:41:14.940843Z] + export EUPS_PATH=/scratch/bvan/conda/envs/default/share/eups
[2019-09-11T00:41:14.940845Z] + EUPS_PATH=/scratch/bvan/conda/envs/default/share/eups
[2019-09-11T00:41:14.940847Z] + cd /scratch/bvan/lsst/distrib/ip_diffim
[2019-09-11T00:41:14.940849Z] + git reset --hard
[2019-09-11T00:41:14.943981Z] HEAD is now at 7441b3d Remove third parties from code
[2019-09-11T00:41:14.944357Z] + git clean -d -f -q -x -e '_build.*'
[2019-09-11T00:41:14.946469Z] + eupspkg PRODUCT=ip_diffim VERSION=tickets.DM-20864-g7441b3d078+4f8fa16c5e FLAVOR=generic prep
[2019-09-11T00:41:15.122596Z] + cat
[2019-09-11T00:41:15.123670Z] + set +x
[2019-09-11T00:41:15.123689Z] Setting up environment with EUPS
[2019-09-11T00:41:15.391657Z] + eupspkg PRODUCT=ip_diffim VERSION=tickets.DM-20864-g7441b3d078+4f8fa16c5e FLAVOR=generic config
[2019-09-11T00:41:15.678779Z] + eupspkg PRODUCT=ip_diffim VERSION=tickets.DM-20864-g7441b3d078+4f8fa16c5e FLAVOR=generic build
[2019-09-11T00:41:16.177003Z] scons: Reading SConscript files ...
[2019-09-11T00:41:16.310569Z] EUPS integration: enabled
[2019-09-11T00:41:16.314897Z] Unrecognized compilers: CC=gcc, CXX=g++
[2019-09-11T00:41:16.355441Z] Checking who built the CC compiler...gcc=7.3.0
[2019-09-11T00:41:16.355607Z] CC is gcc version 7.3.0
[2019-09-11T00:41:16.355714Z] Checking for C++14 support
[2019-09-11T00:41:16.392013Z] Checking whether the C++ compiler works... yes
[2019-09-11T00:41:16.392031Z] C++14 supported with '-std=c++14'
[2019-09-11T00:41:16.393113Z] Setting up environment to build package 'ip_diffim'.
[2019-09-11T00:41:25.589011Z] Running pytest with 4 processes
[2019-09-11T00:41:25.589169Z] pytest: automated test discovery mode enabled.
[2019-09-11T00:41:25.600814Z] scons: done reading SConscript files.
[2019-09-11T00:41:25.603601Z] scons: Building targets ...
[2019-09-11T00:41:25.735542Z] g++ -o src/AssessSpatialKernelVisitor.os -c -std=c++14 -g -DLSST_LITTLE_ENDIAN=1 -O3 -Wall -Wno-unknown-pragmas -Wno-unused-local-typedefs -fno-lto -fPIC -Iinclude -I/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_config/tickets.DM-20864-g205f287ac7+148de8c309/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/include -isystem /scratch/bvan/conda/envs/default/include/python3.7m -isystem /scratch/bvan/conda/envs/default/include -isystem /scratch/bvan/conda/envs/default/include/eigen3 -isystem /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/numpy/core/include src/AssessSpatialKernelVisitor.cc
[2019-09-11T00:41:25.755242Z] g++ -o src/BasisLists.os -c -std=c++14 -g -DLSST_LITTLE_ENDIAN=1 -O3 -Wall -Wno-unknown-pragmas -Wno-unused-local-typedefs -fno-lto -fPIC -Iinclude -I/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_config/tickets.DM-20864-g205f287ac7+148de8c309/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/include -isystem /scratch/bvan/conda/envs/default/include/python3.7m -isystem /scratch/bvan/conda/envs/default/include -isystem /scratch/bvan/conda/envs/default/include/eigen3 -isystem /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/numpy/core/include src/BasisLists.cc
[2019-09-11T00:41:25.763726Z] g++ -o src/BuildSingleKernelVisitor.os -c -std=c++14 -g -DLSST_LITTLE_ENDIAN=1 -O3 -Wall -Wno-unknown-pragmas -Wno-unused-local-typedefs -fno-lto -fPIC -Iinclude -I/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_config/tickets.DM-20864-g205f287ac7+148de8c309/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/include -isystem /scratch/bvan/conda/envs/default/include/python3.7m -isystem /scratch/bvan/conda/envs/default/include -isystem /scratch/bvan/conda/envs/default/include/eigen3 -isystem /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/numpy/core/include src/BuildSingleKernelVisitor.cc
[2019-09-11T00:41:25.774840Z] g++ -o src/BuildSpatialKernelVisitor.os -c -std=c++14 -g -DLSST_LITTLE_ENDIAN=1 -O3 -Wall -Wno-unknown-pragmas -Wno-unused-local-typedefs -fno-lto -fPIC -Iinclude -I/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_config/tickets.DM-20864-g205f287ac7+148de8c309/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/include -isystem /scratch/bvan/conda/envs/default/include/python3.7m -isystem /scratch/bvan/conda/envs/default/include -isystem /scratch/bvan/conda/envs/default/include/eigen3 -isystem /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/numpy/core/include src/BuildSpatialKernelVisitor.cc
[2019-09-11T00:41:36.875072Z] g++ -o src/DipoleAlgorithms.os -c -std=c++14 -g -DLSST_LITTLE_ENDIAN=1 -O3 -Wall -Wno-unknown-pragmas -Wno-unused-local-typedefs -fno-lto -fPIC -Iinclude -I/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_config/tickets.DM-20864-g205f287ac7+148de8c309/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/include -isystem /scratch/bvan/conda/envs/default/include/python3.7m -isystem /scratch/bvan/conda/envs/default/include -isystem /scratch/bvan/conda/envs/default/include/eigen3 -isystem /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/numpy/core/include src/DipoleAlgorithms.cc
[2019-09-11T00:41:37.252711Z] g++ -o src/ImageSubtract.os -c -std=c++14 -g -DLSST_LITTLE_ENDIAN=1 -O3 -Wall -Wno-unknown-pragmas -Wno-unused-local-typedefs -fno-lto -fPIC -Iinclude -I/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_config/tickets.DM-20864-g205f287ac7+148de8c309/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/include -isystem /scratch/bvan/conda/envs/default/include/python3.7m -isystem /scratch/bvan/conda/envs/default/include -isystem /scratch/bvan/conda/envs/default/include/eigen3 -isystem /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/numpy/core/include src/ImageSubtract.cc
[2019-09-11T00:41:37.760362Z] g++ -o src/KernelCandidate.os -c -std=c++14 -g -DLSST_LITTLE_ENDIAN=1 -O3 -Wall -Wno-unknown-pragmas -Wno-unused-local-typedefs -fno-lto -fPIC -Iinclude -I/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_config/tickets.DM-20864-g205f287ac7+148de8c309/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/include -isystem /scratch/bvan/conda/envs/default/include/python3.7m -isystem /scratch/bvan/conda/envs/default/include -isystem /scratch/bvan/conda/envs/default/include/eigen3 -isystem /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/numpy/core/include src/KernelCandidate.cc
[2019-09-11T00:41:38.148700Z] g++ -o src/KernelCandidateDetection.os -c -std=c++14 -g -DLSST_LITTLE_ENDIAN=1 -O3 -Wall -Wno-unknown-pragmas -Wno-unused-local-typedefs -fno-lto -fPIC -Iinclude -I/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_config/tickets.DM-20864-g205f287ac7+148de8c309/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/include -isystem /scratch/bvan/conda/envs/default/include/python3.7m -isystem /scratch/bvan/conda/envs/default/include -isystem /scratch/bvan/conda/envs/default/include/eigen3 -isystem /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/numpy/core/include src/KernelCandidateDetection.cc
[2019-09-11T00:41:48.447099Z] g++ -o src/KernelPca.os -c -std=c++14 -g -DLSST_LITTLE_ENDIAN=1 -O3 -Wall -Wno-unknown-pragmas -Wno-unused-local-typedefs -fno-lto -fPIC -Iinclude -I/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_config/tickets.DM-20864-g205f287ac7+148de8c309/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/include -isystem /scratch/bvan/conda/envs/default/include/python3.7m -isystem /scratch/bvan/conda/envs/default/include -isystem /scratch/bvan/conda/envs/default/include/eigen3 -isystem /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/numpy/core/include src/KernelPca.cc
[2019-09-11T00:41:49.183752Z] g++ -o src/KernelSolution.os -c -std=c++14 -g -DLSST_LITTLE_ENDIAN=1 -O3 -Wall -Wno-unknown-pragmas -Wno-unused-local-typedefs -fno-lto -fPIC -Iinclude -I/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_config/tickets.DM-20864-g205f287ac7+148de8c309/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/include -isystem /scratch/bvan/conda/envs/default/include/python3.7m -isystem /scratch/bvan/conda/envs/default/include -isystem /scratch/bvan/conda/envs/default/include/eigen3 -isystem /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/numpy/core/include src/KernelSolution.cc
[2019-09-11T00:41:49.308352Z] g++ -o src/KernelSumVisitor.os -c -std=c++14 -g -DLSST_LITTLE_ENDIAN=1 -O3 -Wall -Wno-unknown-pragmas -Wno-unused-local-typedefs -fno-lto -fPIC -Iinclude -I/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_config/tickets.DM-20864-g205f287ac7+148de8c309/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/include -isystem /scratch/bvan/conda/envs/default/include/python3.7m -isystem /scratch/bvan/conda/envs/default/include -isystem /scratch/bvan/conda/envs/default/include/eigen3 -isystem /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/numpy/core/include src/KernelSumVisitor.cc
[2019-09-11T00:41:49.906959Z] g++ -o python/lsst/ip/diffim/basisLists.os -c -std=c++14 -g -DLSST_LITTLE_ENDIAN=1 -O3 -Wall -Wno-unknown-pragmas -Wno-unused-local-typedefs -fno-lto -fvisibility=hidden -fPIC -Iinclude -I/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_config/tickets.DM-20864-g205f287ac7+148de8c309/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/include -isystem /scratch/bvan/conda/envs/default/include/python3.7m -isystem /scratch/bvan/conda/envs/default/include -isystem /scratch/bvan/conda/envs/default/include/eigen3 -isystem /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/numpy/core/include python/lsst/ip/diffim/basisLists.cc
[2019-09-11T00:41:58.447965Z] g++ -o python/lsst/ip/diffim/findSetBits.os -c -std=c++14 -g -DLSST_LITTLE_ENDIAN=1 -O3 -Wall -Wno-unknown-pragmas -Wno-unused-local-typedefs -fno-lto -fvisibility=hidden -fPIC -Iinclude -I/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_config/tickets.DM-20864-g205f287ac7+148de8c309/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/include -isystem /scratch/bvan/conda/envs/default/include/python3.7m -isystem /scratch/bvan/conda/envs/default/include -isystem /scratch/bvan/conda/envs/default/include/eigen3 -isystem /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/numpy/core/include python/lsst/ip/diffim/findSetBits.cc
[2019-09-11T00:42:00.267892Z] g++ -o python/lsst/ip/diffim/imageStatistics.os -c -std=c++14 -g -DLSST_LITTLE_ENDIAN=1 -O3 -Wall -Wno-unknown-pragmas -Wno-unused-local-typedefs -fno-lto -fvisibility=hidden -fPIC -Iinclude -I/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_config/tickets.DM-20864-g205f287ac7+148de8c309/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/include -isystem /scratch/bvan/conda/envs/default/include/python3.7m -isystem /scratch/bvan/conda/envs/default/include -isystem /scratch/bvan/conda/envs/default/include/eigen3 -isystem /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/numpy/core/include python/lsst/ip/diffim/imageStatistics.cc
[2019-09-11T00:42:00.940240Z] g++ -o python/lsst/ip/diffim/imageSubtract.os -c -std=c++14 -g -DLSST_LITTLE_ENDIAN=1 -O3 -Wall -Wno-unknown-pragmas -Wno-unused-local-typedefs -fno-lto -fvisibility=hidden -fPIC -Iinclude -I/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_config/tickets.DM-20864-g205f287ac7+148de8c309/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/include -isystem /scratch/bvan/conda/envs/default/include/python3.7m -isystem /scratch/bvan/conda/envs/default/include -isystem /scratch/bvan/conda/envs/default/include/eigen3 -isystem /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/numpy/core/include python/lsst/ip/diffim/imageSubtract.cc
[2019-09-11T00:42:11.023426Z] g++ -o python/lsst/ip/diffim/kernelCandidate.os -c -std=c++14 -g -DLSST_LITTLE_ENDIAN=1 -O3 -Wall -Wno-unknown-pragmas -Wno-unused-local-typedefs -fno-lto -fvisibility=hidden -fPIC -Iinclude -I/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_config/tickets.DM-20864-g205f287ac7+148de8c309/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/include -isystem /scratch/bvan/conda/envs/default/include/python3.7m -isystem /scratch/bvan/conda/envs/default/include -isystem /scratch/bvan/conda/envs/default/include/eigen3 -isystem /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/numpy/core/include python/lsst/ip/diffim/kernelCandidate.cc
[2019-09-11T00:42:14.875349Z] g++ -o python/lsst/ip/diffim/kernelCandidateDetection.os -c -std=c++14 -g -DLSST_LITTLE_ENDIAN=1 -O3 -Wall -Wno-unknown-pragmas -Wno-unused-local-typedefs -fno-lto -fvisibility=hidden -fPIC -Iinclude -I/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_config/tickets.DM-20864-g205f287ac7+148de8c309/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/include -isystem /scratch/bvan/conda/envs/default/include/python3.7m -isystem /scratch/bvan/conda/envs/default/include -isystem /scratch/bvan/conda/envs/default/include/eigen3 -isystem /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/numpy/core/include python/lsst/ip/diffim/kernelCandidateDetection.cc
[2019-09-11T00:42:17.079180Z] g++ -o python/lsst/ip/diffim/kernelSolution.os -c -std=c++14 -g -DLSST_LITTLE_ENDIAN=1 -O3 -Wall -Wno-unknown-pragmas -Wno-unused-local-typedefs -fno-lto -fvisibility=hidden -fPIC -Iinclude -I/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_config/tickets.DM-20864-g205f287ac7+148de8c309/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/include -isystem /scratch/bvan/conda/envs/default/include/python3.7m -isystem /scratch/bvan/conda/envs/default/include -isystem /scratch/bvan/conda/envs/default/include/eigen3 -isystem /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/numpy/core/include python/lsst/ip/diffim/kernelSolution.cc
[2019-09-11T00:42:28.559178Z] g++ -o python/lsst/ip/diffim/dipoleAlgorithms.os -c -std=c++14 -g -DLSST_LITTLE_ENDIAN=1 -O3 -Wall -Wno-unknown-pragmas -Wno-unused-local-typedefs -fno-lto -fvisibility=hidden -fPIC -Iinclude -I/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_config/tickets.DM-20864-g205f287ac7+148de8c309/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/include -isystem /scratch/bvan/conda/envs/default/include/python3.7m -isystem /scratch/bvan/conda/envs/default/include -isystem /scratch/bvan/conda/envs/default/include/eigen3 -isystem /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/numpy/core/include python/lsst/ip/diffim/dipoleAlgorithms.cc
[2019-09-11T00:42:29.702463Z] g++ -o python/lsst/ip/diffim/detail/assessSpatialKernelVisitor.os -c -std=c++14 -g -DLSST_LITTLE_ENDIAN=1 -O3 -Wall -Wno-unknown-pragmas -Wno-unused-local-typedefs -fno-lto -fvisibility=hidden -fPIC -Iinclude -I/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_config/tickets.DM-20864-g205f287ac7+148de8c309/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/include -isystem /scratch/bvan/conda/envs/default/include/python3.7m -isystem /scratch/bvan/conda/envs/default/include -isystem /scratch/bvan/conda/envs/default/include/eigen3 -isystem /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/numpy/core/include python/lsst/ip/diffim/detail/assessSpatialKernelVisitor.cc
[2019-09-11T00:42:32.417840Z] g++ -o lib/libip_diffim.so -Wl,-rpath-link -Wl,/scratch/bvan/lsst/distrib/ip_diffim/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_deblender/tickets.DM-20864-g9abac69841+714ffc0011/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_algorithms/tickets.DM-20864-g039087be31+265561e40d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/coadd_utils/tickets.DM-20864-gb8d0fb083d+b554669148/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_config/tickets.DM-20864-g205f287ac7+148de8c309/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/lib:/u/gl/bvan/anaconda3/envs/scipl/lib:/usr/lib64/openmpi/lib -fno-lto -shared -Wl,-rpath=/scratch/bvan/conda/envs/default/include/python3.7m/../../lib src/AssessSpatialKernelVisitor.os src/BasisLists.os src/BuildSingleKernelVisitor.os src/BuildSpatialKernelVisitor.os src/DipoleAlgorithms.os src/ImageSubtract.os src/KernelCandidate.os src/KernelCandidateDetection.os src/KernelPca.os src/KernelSolution.os src/KernelSumVisitor.os -Llib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/lib -L/scratch/bvan/conda/envs/default/lib -L/scratch/bvan/conda/envs/default/lib/python3.7/config-3.7m-x86_64-linux-gnu -L/scratch/bvan/conda/envs/default/lib -lmeas_base -lafw -lastshim -last -last_pal -last_grf_2.0 -last_grf_3.2 -last_grf_5.6 -last_grf3d -last_pass2 -last_err -lm -lboost_serialization -lcfitsio -lgsl -lgslcblas -lMinuit2 -ldaf_persistence -lpex_policy -lboost_filesystem -lboost_system -llog -llog4cxx -ldaf_base -lboost_regex -lgeom -lutils -lsphgeom -lpex_exceptions -lbase -lfftw3f -lfftw3 -lboost_math_c99 -lpthread
[2019-09-11T00:42:35.093776Z] g++ -o python/lsst/ip/diffim/kernelCandidate.so -Wl,-rpath-link -Wl,/scratch/bvan/lsst/distrib/ip_diffim/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_deblender/tickets.DM-20864-g9abac69841+714ffc0011/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_algorithms/tickets.DM-20864-g039087be31+265561e40d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/coadd_utils/tickets.DM-20864-gb8d0fb083d+b554669148/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_config/tickets.DM-20864-g205f287ac7+148de8c309/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/lib:/u/gl/bvan/anaconda3/envs/scipl/lib:/usr/lib64/openmpi/lib -fno-lto -shared -Wl,-rpath=/scratch/bvan/conda/envs/default/include/python3.7m/../../lib python/lsst/ip/diffim/kernelCandidate.os -Llib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/lib -L/scratch/bvan/conda/envs/default/lib -L/scratch/bvan/conda/envs/default/lib/python3.7/config-3.7m-x86_64-linux-gnu -L/scratch/bvan/conda/envs/default/lib -lip_diffim -lmeas_base -lafw -lastshim -last -last_pal -last_grf_2.0 -last_grf_3.2 -last_grf_5.6 -last_grf3d -last_pass2 -last_err -lm -lboost_serialization -lcfitsio -lgsl -lgslcblas -lMinuit2 -ldaf_persistence -lpex_policy -lboost_filesystem -lboost_system -llog -llog4cxx -ldaf_base -lboost_regex -lgeom -lutils -lsphgeom -lpex_exceptions -lbase -lfftw3f -lfftw3 -lboost_math_c99 -lpthread -lrt -lutil -ldl -lpython3.7m
[2019-09-11T00:42:35.358764Z] g++ -o python/lsst/ip/diffim/imageStatistics.so -Wl,-rpath-link -Wl,/scratch/bvan/lsst/distrib/ip_diffim/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_deblender/tickets.DM-20864-g9abac69841+714ffc0011/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_algorithms/tickets.DM-20864-g039087be31+265561e40d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/coadd_utils/tickets.DM-20864-gb8d0fb083d+b554669148/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_config/tickets.DM-20864-g205f287ac7+148de8c309/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/lib:/u/gl/bvan/anaconda3/envs/scipl/lib:/usr/lib64/openmpi/lib -fno-lto -shared -Wl,-rpath=/scratch/bvan/conda/envs/default/include/python3.7m/../../lib python/lsst/ip/diffim/imageStatistics.os -Llib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/lib -L/scratch/bvan/conda/envs/default/lib -L/scratch/bvan/conda/envs/default/lib/python3.7/config-3.7m-x86_64-linux-gnu -L/scratch/bvan/conda/envs/default/lib -lip_diffim -lmeas_base -lafw -lastshim -last -last_pal -last_grf_2.0 -last_grf_3.2 -last_grf_5.6 -last_grf3d -last_pass2 -last_err -lm -lboost_serialization -lcfitsio -lgsl -lgslcblas -lMinuit2 -ldaf_persistence -lpex_policy -lboost_filesystem -lboost_system -llog -llog4cxx -ldaf_base -lboost_regex -lgeom -lutils -lsphgeom -lpex_exceptions -lbase -lfftw3f -lfftw3 -lboost_math_c99 -lpthread -lrt -lutil -ldl -lpython3.7m
[2019-09-11T00:42:35.618694Z] g++ -o python/lsst/ip/diffim/findSetBits.so -Wl,-rpath-link -Wl,/scratch/bvan/lsst/distrib/ip_diffim/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_deblender/tickets.DM-20864-g9abac69841+714ffc0011/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_algorithms/tickets.DM-20864-g039087be31+265561e40d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/coadd_utils/tickets.DM-20864-gb8d0fb083d+b554669148/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_config/tickets.DM-20864-g205f287ac7+148de8c309/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/lib:/u/gl/bvan/anaconda3/envs/scipl/lib:/usr/lib64/openmpi/lib -fno-lto -shared -Wl,-rpath=/scratch/bvan/conda/envs/default/include/python3.7m/../../lib python/lsst/ip/diffim/findSetBits.os -Llib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/lib -L/scratch/bvan/conda/envs/default/lib -L/scratch/bvan/conda/envs/default/lib/python3.7/config-3.7m-x86_64-linux-gnu -L/scratch/bvan/conda/envs/default/lib -lip_diffim -lmeas_base -lafw -lastshim -last -last_pal -last_grf_2.0 -last_grf_3.2 -last_grf_5.6 -last_grf3d -last_pass2 -last_err -lm -lboost_serialization -lcfitsio -lgsl -lgslcblas -lMinuit2 -ldaf_persistence -lpex_policy -lboost_filesystem -lboost_system -llog -llog4cxx -ldaf_base -lboost_regex -lgeom -lutils -lsphgeom -lpex_exceptions -lbase -lfftw3f -lfftw3 -lboost_math_c99 -lpthread -lrt -lutil -ldl -lpython3.7m
[2019-09-11T00:42:35.819487Z] g++ -o python/lsst/ip/diffim/imageSubtract.so -Wl,-rpath-link -Wl,/scratch/bvan/lsst/distrib/ip_diffim/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_deblender/tickets.DM-20864-g9abac69841+714ffc0011/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_algorithms/tickets.DM-20864-g039087be31+265561e40d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/coadd_utils/tickets.DM-20864-gb8d0fb083d+b554669148/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_config/tickets.DM-20864-g205f287ac7+148de8c309/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/lib:/u/gl/bvan/anaconda3/envs/scipl/lib:/usr/lib64/openmpi/lib -fno-lto -shared -Wl,-rpath=/scratch/bvan/conda/envs/default/include/python3.7m/../../lib python/lsst/ip/diffim/imageSubtract.os -Llib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/lib -L/scratch/bvan/conda/envs/default/lib -L/scratch/bvan/conda/envs/default/lib/python3.7/config-3.7m-x86_64-linux-gnu -L/scratch/bvan/conda/envs/default/lib -lip_diffim -lmeas_base -lafw -lastshim -last -last_pal -last_grf_2.0 -last_grf_3.2 -last_grf_5.6 -last_grf3d -last_pass2 -last_err -lm -lboost_serialization -lcfitsio -lgsl -lgslcblas -lMinuit2 -ldaf_persistence -lpex_policy -lboost_filesystem -lboost_system -llog -llog4cxx -ldaf_base -lboost_regex -lgeom -lutils -lsphgeom -lpex_exceptions -lbase -lfftw3f -lfftw3 -lboost_math_c99 -lpthread -lrt -lutil -ldl -lpython3.7m
[2019-09-11T00:42:36.060551Z] g++ -o python/lsst/ip/diffim/kernelCandidateDetection.so -Wl,-rpath-link -Wl,/scratch/bvan/lsst/distrib/ip_diffim/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_deblender/tickets.DM-20864-g9abac69841+714ffc0011/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_algorithms/tickets.DM-20864-g039087be31+265561e40d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/coadd_utils/tickets.DM-20864-gb8d0fb083d+b554669148/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_config/tickets.DM-20864-g205f287ac7+148de8c309/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/lib:/u/gl/bvan/anaconda3/envs/scipl/lib:/usr/lib64/openmpi/lib -fno-lto -shared -Wl,-rpath=/scratch/bvan/conda/envs/default/include/python3.7m/../../lib python/lsst/ip/diffim/kernelCandidateDetection.os -Llib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/lib -L/scratch/bvan/conda/envs/default/lib -L/scratch/bvan/conda/envs/default/lib/python3.7/config-3.7m-x86_64-linux-gnu -L/scratch/bvan/conda/envs/default/lib -lip_diffim -lmeas_base -lafw -lastshim -last -last_pal -last_grf_2.0 -last_grf_3.2 -last_grf_5.6 -last_grf3d -last_pass2 -last_err -lm -lboost_serialization -lcfitsio -lgsl -lgslcblas -lMinuit2 -ldaf_persistence -lpex_policy -lboost_filesystem -lboost_system -llog -llog4cxx -ldaf_base -lboost_regex -lgeom -lutils -lsphgeom -lpex_exceptions -lbase -lfftw3f -lfftw3 -lboost_math_c99 -lpthread -lrt -lutil -ldl -lpython3.7m
[2019-09-11T00:42:36.294668Z] g++ -o python/lsst/ip/diffim/basisLists.so -Wl,-rpath-link -Wl,/scratch/bvan/lsst/distrib/ip_diffim/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_deblender/tickets.DM-20864-g9abac69841+714ffc0011/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_algorithms/tickets.DM-20864-g039087be31+265561e40d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/coadd_utils/tickets.DM-20864-gb8d0fb083d+b554669148/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_config/tickets.DM-20864-g205f287ac7+148de8c309/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/lib:/u/gl/bvan/anaconda3/envs/scipl/lib:/usr/lib64/openmpi/lib -fno-lto -shared -Wl,-rpath=/scratch/bvan/conda/envs/default/include/python3.7m/../../lib python/lsst/ip/diffim/basisLists.os -Llib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/lib -L/scratch/bvan/conda/envs/default/lib -L/scratch/bvan/conda/envs/default/lib/python3.7/config-3.7m-x86_64-linux-gnu -L/scratch/bvan/conda/envs/default/lib -lip_diffim -lmeas_base -lafw -lastshim -last -last_pal -last_grf_2.0 -last_grf_3.2 -last_grf_5.6 -last_grf3d -last_pass2 -last_err -lm -lboost_serialization -lcfitsio -lgsl -lgslcblas -lMinuit2 -ldaf_persistence -lpex_policy -lboost_filesystem -lboost_system -llog -llog4cxx -ldaf_base -lboost_regex -lgeom -lutils -lsphgeom -lpex_exceptions -lbase -lfftw3f -lfftw3 -lboost_math_c99 -lpthread -lrt -lutil -ldl -lpython3.7m
[2019-09-11T00:42:36.506493Z] g++ -o python/lsst/ip/diffim/detail/buildSingleKernelVisitor.os -c -std=c++14 -g -DLSST_LITTLE_ENDIAN=1 -O3 -Wall -Wno-unknown-pragmas -Wno-unused-local-typedefs -fno-lto -fvisibility=hidden -fPIC -Iinclude -I/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_config/tickets.DM-20864-g205f287ac7+148de8c309/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/include -isystem /scratch/bvan/conda/envs/default/include/python3.7m -isystem /scratch/bvan/conda/envs/default/include -isystem /scratch/bvan/conda/envs/default/include/eigen3 -isystem /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/numpy/core/include python/lsst/ip/diffim/detail/buildSingleKernelVisitor.cc
[2019-09-11T00:42:40.173830Z] g++ -o python/lsst/ip/diffim/kernelSolution.so -Wl,-rpath-link -Wl,/scratch/bvan/lsst/distrib/ip_diffim/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_deblender/tickets.DM-20864-g9abac69841+714ffc0011/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_algorithms/tickets.DM-20864-g039087be31+265561e40d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/coadd_utils/tickets.DM-20864-gb8d0fb083d+b554669148/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_config/tickets.DM-20864-g205f287ac7+148de8c309/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/lib:/u/gl/bvan/anaconda3/envs/scipl/lib:/usr/lib64/openmpi/lib -fno-lto -shared -Wl,-rpath=/scratch/bvan/conda/envs/default/include/python3.7m/../../lib python/lsst/ip/diffim/kernelSolution.os -Llib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/lib -L/scratch/bvan/conda/envs/default/lib -L/scratch/bvan/conda/envs/default/lib/python3.7/config-3.7m-x86_64-linux-gnu -L/scratch/bvan/conda/envs/default/lib -lip_diffim -lmeas_base -lafw -lastshim -last -last_pal -last_grf_2.0 -last_grf_3.2 -last_grf_5.6 -last_grf3d -last_pass2 -last_err -lm -lboost_serialization -lcfitsio -lgsl -lgslcblas -lMinuit2 -ldaf_persistence -lpex_policy -lboost_filesystem -lboost_system -llog -llog4cxx -ldaf_base -lboost_regex -lgeom -lutils -lsphgeom -lpex_exceptions -lbase -lfftw3f -lfftw3 -lboost_math_c99 -lpthread -lrt -lutil -ldl -lpython3.7m
[2019-09-11T00:42:40.495467Z] g++ -o python/lsst/ip/diffim/detail/buildSpatialKernelVisitor.os -c -std=c++14 -g -DLSST_LITTLE_ENDIAN=1 -O3 -Wall -Wno-unknown-pragmas -Wno-unused-local-typedefs -fno-lto -fvisibility=hidden -fPIC -Iinclude -I/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_config/tickets.DM-20864-g205f287ac7+148de8c309/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/include -isystem /scratch/bvan/conda/envs/default/include/python3.7m -isystem /scratch/bvan/conda/envs/default/include -isystem /scratch/bvan/conda/envs/default/include/eigen3 -isystem /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/numpy/core/include python/lsst/ip/diffim/detail/buildSpatialKernelVisitor.cc
[2019-09-11T00:42:45.146010Z] g++ -o python/lsst/ip/diffim/detail/assessSpatialKernelVisitor.so -Wl,-rpath-link -Wl,/scratch/bvan/lsst/distrib/ip_diffim/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_deblender/tickets.DM-20864-g9abac69841+714ffc0011/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_algorithms/tickets.DM-20864-g039087be31+265561e40d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/coadd_utils/tickets.DM-20864-gb8d0fb083d+b554669148/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_config/tickets.DM-20864-g205f287ac7+148de8c309/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/lib:/u/gl/bvan/anaconda3/envs/scipl/lib:/usr/lib64/openmpi/lib -fno-lto -shared -Wl,-rpath=/scratch/bvan/conda/envs/default/include/python3.7m/../../lib python/lsst/ip/diffim/detail/assessSpatialKernelVisitor.os -Llib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/lib -L/scratch/bvan/conda/envs/default/lib -L/scratch/bvan/conda/envs/default/lib/python3.7/config-3.7m-x86_64-linux-gnu -L/scratch/bvan/conda/envs/default/lib -lip_diffim -lmeas_base -lafw -lastshim -last -last_pal -last_grf_2.0 -last_grf_3.2 -last_grf_5.6 -last_grf3d -last_pass2 -last_err -lm -lboost_serialization -lcfitsio -lgsl -lgslcblas -lMinuit2 -ldaf_persistence -lpex_policy -lboost_filesystem -lboost_system -llog -llog4cxx -ldaf_base -lboost_regex -lgeom -lutils -lsphgeom -lpex_exceptions -lbase -lfftw3f -lfftw3 -lboost_math_c99 -lpthread -lrt -lutil -ldl -lpython3.7m
[2019-09-11T00:42:45.418082Z] g++ -o python/lsst/ip/diffim/detail/kernelPca.os -c -std=c++14 -g -DLSST_LITTLE_ENDIAN=1 -O3 -Wall -Wno-unknown-pragmas -Wno-unused-local-typedefs -fno-lto -fvisibility=hidden -fPIC -Iinclude -I/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_config/tickets.DM-20864-g205f287ac7+148de8c309/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/include -isystem /scratch/bvan/conda/envs/default/include/python3.7m -isystem /scratch/bvan/conda/envs/default/include -isystem /scratch/bvan/conda/envs/default/include/eigen3 -isystem /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/numpy/core/include python/lsst/ip/diffim/detail/kernelPca.cc
[2019-09-11T00:42:46.473934Z] g++ -o python/lsst/ip/diffim/_dipoleAlgorithms.so -Wl,-rpath-link -Wl,/scratch/bvan/lsst/distrib/ip_diffim/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_deblender/tickets.DM-20864-g9abac69841+714ffc0011/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_algorithms/tickets.DM-20864-g039087be31+265561e40d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/coadd_utils/tickets.DM-20864-gb8d0fb083d+b554669148/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_config/tickets.DM-20864-g205f287ac7+148de8c309/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/lib:/u/gl/bvan/anaconda3/envs/scipl/lib:/usr/lib64/openmpi/lib -fno-lto -shared -Wl,-rpath=/scratch/bvan/conda/envs/default/include/python3.7m/../../lib python/lsst/ip/diffim/dipoleAlgorithms.os -Llib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/lib -L/scratch/bvan/conda/envs/default/lib -L/scratch/bvan/conda/envs/default/lib/python3.7/config-3.7m-x86_64-linux-gnu -L/scratch/bvan/conda/envs/default/lib -lip_diffim -lmeas_base -lafw -lastshim -last -last_pal -last_grf_2.0 -last_grf_3.2 -last_grf_5.6 -last_grf3d -last_pass2 -last_err -lm -lboost_serialization -lcfitsio -lgsl -lgslcblas -lMinuit2 -ldaf_persistence -lpex_policy -lboost_filesystem -lboost_system -llog -llog4cxx -ldaf_base -lboost_regex -lgeom -lutils -lsphgeom -lpex_exceptions -lbase -lfftw3f -lfftw3 -lboost_math_c99 -lpthread -lrt -lutil -ldl -lpython3.7m
[2019-09-11T00:42:46.761602Z] g++ -o python/lsst/ip/diffim/detail/kernelSumVisitor.os -c -std=c++14 -g -DLSST_LITTLE_ENDIAN=1 -O3 -Wall -Wno-unknown-pragmas -Wno-unused-local-typedefs -fno-lto -fvisibility=hidden -fPIC -Iinclude -I/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_config/tickets.DM-20864-g205f287ac7+148de8c309/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/include -isystem /scratch/bvan/conda/envs/default/include/python3.7m -isystem /scratch/bvan/conda/envs/default/include -isystem /scratch/bvan/conda/envs/default/include/eigen3 -isystem /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/numpy/core/include python/lsst/ip/diffim/detail/kernelSumVisitor.cc
[2019-09-11T00:42:53.728971Z] g++ -o python/lsst/ip/diffim/detail/buildSingleKernelVisitor.so -Wl,-rpath-link -Wl,/scratch/bvan/lsst/distrib/ip_diffim/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_deblender/tickets.DM-20864-g9abac69841+714ffc0011/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_algorithms/tickets.DM-20864-g039087be31+265561e40d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/coadd_utils/tickets.DM-20864-gb8d0fb083d+b554669148/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_config/tickets.DM-20864-g205f287ac7+148de8c309/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/lib:/u/gl/bvan/anaconda3/envs/scipl/lib:/usr/lib64/openmpi/lib -fno-lto -shared -Wl,-rpath=/scratch/bvan/conda/envs/default/include/python3.7m/../../lib python/lsst/ip/diffim/detail/buildSingleKernelVisitor.os -Llib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/lib -L/scratch/bvan/conda/envs/default/lib -L/scratch/bvan/conda/envs/default/lib/python3.7/config-3.7m-x86_64-linux-gnu -L/scratch/bvan/conda/envs/default/lib -lip_diffim -lmeas_base -lafw -lastshim -last -last_pal -last_grf_2.0 -last_grf_3.2 -last_grf_5.6 -last_grf3d -last_pass2 -last_err -lm -lboost_serialization -lcfitsio -lgsl -lgslcblas -lMinuit2 -ldaf_persistence -lpex_policy -lboost_filesystem -lboost_system -llog -llog4cxx -ldaf_base -lboost_regex -lgeom -lutils -lsphgeom -lpex_exceptions -lbase -lfftw3f -lfftw3 -lboost_math_c99 -lpthread -lrt -lutil -ldl -lpython3.7m
[2019-09-11T00:42:53.987678Z] g++ -o examples/maskedKernel.o -c -std=c++14 -g -DLSST_LITTLE_ENDIAN=1 -O3 -Wall -Wno-unknown-pragmas -Wno-unused-local-typedefs -fno-lto -Iinclude -I/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_config/tickets.DM-20864-g205f287ac7+148de8c309/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/include -isystem /scratch/bvan/conda/envs/default/include/python3.7m -isystem /scratch/bvan/conda/envs/default/include -isystem /scratch/bvan/conda/envs/default/include/eigen3 -isystem /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/numpy/core/include examples/maskedKernel.cc
[2019-09-11T00:42:57.420829Z] g++ -o python/lsst/ip/diffim/detail/buildSpatialKernelVisitor.so -Wl,-rpath-link -Wl,/scratch/bvan/lsst/distrib/ip_diffim/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_deblender/tickets.DM-20864-g9abac69841+714ffc0011/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_algorithms/tickets.DM-20864-g039087be31+265561e40d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/coadd_utils/tickets.DM-20864-gb8d0fb083d+b554669148/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_config/tickets.DM-20864-g205f287ac7+148de8c309/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/lib:/u/gl/bvan/anaconda3/envs/scipl/lib:/usr/lib64/openmpi/lib -fno-lto -shared -Wl,-rpath=/scratch/bvan/conda/envs/default/include/python3.7m/../../lib python/lsst/ip/diffim/detail/buildSpatialKernelVisitor.os -Llib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/lib -L/scratch/bvan/conda/envs/default/lib -L/scratch/bvan/conda/envs/default/lib/python3.7/config-3.7m-x86_64-linux-gnu -L/scratch/bvan/conda/envs/default/lib -lip_diffim -lmeas_base -lafw -lastshim -last -last_pal -last_grf_2.0 -last_grf_3.2 -last_grf_5.6 -last_grf3d -last_pass2 -last_err -lm -lboost_serialization -lcfitsio -lgsl -lgslcblas -lMinuit2 -ldaf_persistence -lpex_policy -lboost_filesystem -lboost_system -llog -llog4cxx -ldaf_base -lboost_regex -lgeom -lutils -lsphgeom -lpex_exceptions -lbase -lfftw3f -lfftw3 -lboost_math_c99 -lpthread -lrt -lutil -ldl -lpython3.7m
[2019-09-11T00:42:57.677944Z] g++ -o examples/pixelAccess.o -c -std=c++14 -g -DLSST_LITTLE_ENDIAN=1 -O3 -Wall -Wno-unknown-pragmas -Wno-unused-local-typedefs -fno-lto -Iinclude -I/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_config/tickets.DM-20864-g205f287ac7+148de8c309/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/include -isystem /scratch/bvan/conda/envs/default/include/python3.7m -isystem /scratch/bvan/conda/envs/default/include -isystem /scratch/bvan/conda/envs/default/include/eigen3 -isystem /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/numpy/core/include examples/pixelAccess.cc
[2019-09-11T00:43:00.572868Z] g++ -o python/lsst/ip/diffim/detail/kernelPca.so -Wl,-rpath-link -Wl,/scratch/bvan/lsst/distrib/ip_diffim/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_deblender/tickets.DM-20864-g9abac69841+714ffc0011/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_algorithms/tickets.DM-20864-g039087be31+265561e40d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/coadd_utils/tickets.DM-20864-gb8d0fb083d+b554669148/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_config/tickets.DM-20864-g205f287ac7+148de8c309/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/lib:/u/gl/bvan/anaconda3/envs/scipl/lib:/usr/lib64/openmpi/lib -fno-lto -shared -Wl,-rpath=/scratch/bvan/conda/envs/default/include/python3.7m/../../lib python/lsst/ip/diffim/detail/kernelPca.os -Llib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/lib -L/scratch/bvan/conda/envs/default/lib -L/scratch/bvan/conda/envs/default/lib/python3.7/config-3.7m-x86_64-linux-gnu -L/scratch/bvan/conda/envs/default/lib -lip_diffim -lmeas_base -lafw -lastshim -last -last_pal -last_grf_2.0 -last_grf_3.2 -last_grf_5.6 -last_grf3d -last_pass2 -last_err -lm -lboost_serialization -lcfitsio -lgsl -lgslcblas -lMinuit2 -ldaf_persistence -lpex_policy -lboost_filesystem -lboost_system -llog -llog4cxx -ldaf_base -lboost_regex -lgeom -lutils -lsphgeom -lpex_exceptions -lbase -lfftw3f -lfftw3 -lboost_math_c99 -lpthread -lrt -lutil -ldl -lpython3.7m
[2019-09-11T00:43:00.834559Z] g++ -o examples/spatialKernel.o -c -std=c++14 -g -DLSST_LITTLE_ENDIAN=1 -O3 -Wall -Wno-unknown-pragmas -Wno-unused-local-typedefs -fno-lto -Iinclude -I/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_config/tickets.DM-20864-g205f287ac7+148de8c309/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/include -I/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/include -isystem /scratch/bvan/conda/envs/default/include/python3.7m -isystem /scratch/bvan/conda/envs/default/include -isystem /scratch/bvan/conda/envs/default/include/eigen3 -isystem /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/numpy/core/include examples/spatialKernel.cc
[2019-09-11T00:43:02.997960Z] g++ -o python/lsst/ip/diffim/detail/kernelSumVisitor.so -Wl,-rpath-link -Wl,/scratch/bvan/lsst/distrib/ip_diffim/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_deblender/tickets.DM-20864-g9abac69841+714ffc0011/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_algorithms/tickets.DM-20864-g039087be31+265561e40d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/coadd_utils/tickets.DM-20864-gb8d0fb083d+b554669148/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_config/tickets.DM-20864-g205f287ac7+148de8c309/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/lib:/u/gl/bvan/anaconda3/envs/scipl/lib:/usr/lib64/openmpi/lib -fno-lto -shared -Wl,-rpath=/scratch/bvan/conda/envs/default/include/python3.7m/../../lib python/lsst/ip/diffim/detail/kernelSumVisitor.os -Llib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/lib -L/scratch/bvan/conda/envs/default/lib -L/scratch/bvan/conda/envs/default/lib/python3.7/config-3.7m-x86_64-linux-gnu -L/scratch/bvan/conda/envs/default/lib -lip_diffim -lmeas_base -lafw -lastshim -last -last_pal -last_grf_2.0 -last_grf_3.2 -last_grf_5.6 -last_grf3d -last_pass2 -last_err -lm -lboost_serialization -lcfitsio -lgsl -lgslcblas -lMinuit2 -ldaf_persistence -lpex_policy -lboost_filesystem -lboost_system -llog -llog4cxx -ldaf_base -lboost_regex -lgeom -lutils -lsphgeom -lpex_exceptions -lbase -lfftw3f -lfftw3 -lboost_math_c99 -lpthread -lrt -lutil -ldl -lpython3.7m
[2019-09-11T00:43:03.256010Z] running global pytest...
[2019-09-11T00:43:03.803204Z] ============================= test session starts ==============================
[2019-09-11T00:43:03.803344Z] platform linux -- Python 3.7.3, pytest-5.0.1, py-1.8.0, pluggy-0.12.0
[2019-09-11T00:43:03.815076Z] rootdir: /scratch/bvan/lsst/distrib/ip_diffim, inifile: setup.cfg
[2019-09-11T00:43:03.815200Z] plugins: doctestplus-0.3.0, flake8-1.0.4, xdist-1.29.0, remotedata-0.3.1, forked-1.0.2, openfiles-0.4.0, session2file-0.1.9, arraydiff-0.3, cov-2.7.1
[2019-09-11T00:43:03.817576Z] gw0 I / gw1 I / gw2 I / gw3 I
[2019-09-11T00:43:05.829121Z] g++ -o examples/maskedKernel -Wl,-rpath-link -Wl,/scratch/bvan/lsst/distrib/ip_diffim/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_deblender/tickets.DM-20864-g9abac69841+714ffc0011/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_algorithms/tickets.DM-20864-g039087be31+265561e40d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/coadd_utils/tickets.DM-20864-gb8d0fb083d+b554669148/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_config/tickets.DM-20864-g205f287ac7+148de8c309/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/lib:/u/gl/bvan/anaconda3/envs/scipl/lib:/usr/lib64/openmpi/lib -fno-lto -Wl,-rpath=/scratch/bvan/conda/envs/default/include/python3.7m/../../lib examples/maskedKernel.o -Llib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/lib -L/scratch/bvan/conda/envs/default/lib -L/scratch/bvan/conda/envs/default/lib/python3.7/config-3.7m-x86_64-linux-gnu -L/scratch/bvan/conda/envs/default/lib -lip_diffim -lmeas_base -lafw -lastshim -last -last_pal -last_grf_2.0 -last_grf_3.2 -last_grf_5.6 -last_grf3d -last_pass2 -last_err -lm -lboost_serialization -lcfitsio -lgsl -lgslcblas -lMinuit2 -ldaf_persistence -lpex_policy -lboost_filesystem -lboost_system -llog -llog4cxx -ldaf_base -lboost_regex -lgeom -lutils -lsphgeom -lpex_exceptions -lbase -lfftw3f -lfftw3 -lboost_math_c99 -lpthread
[2019-09-11T00:43:06.588179Z] buildConfig(["doc/doxygen.conf"], ["doc/doxygen.conf.in"])
[2019-09-11T00:43:06.769130Z] doxygen /scratch/bvan/lsst/distrib/ip_diffim/doc/doxygen.conf
[2019-09-11T00:43:06.796291Z] warning: Tag 'PERL_PATH' at line 2108 of file 'base.inc' has become obsolete.
[2019-09-11T00:43:06.796313Z] To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
[2019-09-11T00:43:06.796321Z] warning: Tag 'MSCGEN_PATH' at line 2130 of file 'base.inc' has become obsolete.
[2019-09-11T00:43:06.796325Z] To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
[2019-09-11T00:43:07.088266Z] /scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/doc/astshim.tag:8090: warning: Duplicate anchor autotoc_md86 found
[2019-09-11T00:43:07.088443Z] /scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/doc/astshim.tag:8090: warning: Duplicate anchor autotoc_md0 found
[2019-09-11T00:43:07.088462Z] /scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/doc/astshim.tag:8090: warning: Duplicate anchor autotoc_md1 found
[2019-09-11T00:43:07.088477Z] /scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/doc/astshim.tag:8090: warning: Duplicate anchor autotoc_md2 found
[2019-09-11T00:43:07.088492Z] /scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/doc/astshim.tag:8090: warning: Duplicate anchor autotoc_md3 found
[2019-09-11T00:43:07.088506Z] /scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/doc/astshim.tag:8090: warning: Duplicate anchor autotoc_md4 found
[2019-09-11T00:43:07.088520Z] /scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/doc/astshim.tag:8090: warning: Duplicate anchor autotoc_md5 found
[2019-09-11T00:43:07.088533Z] /scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/doc/astshim.tag:8090: warning: Duplicate anchor autotoc_md6 found
[2019-09-11T00:43:07.088558Z] /scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/doc/astshim.tag:8090: warning: Duplicate anchor autotoc_md7 found
[2019-09-11T00:43:07.088571Z] /scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/doc/astshim.tag:8090: warning: Duplicate anchor autotoc_md8 found
[2019-09-11T00:43:07.945498Z] /scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/doc/afw.tag:1: warning: Internal inconsistency: scope for class lsst::afw::table::detail::SchemaImpl::MakeItem::apply not found!
[2019-09-11T00:43:07.945559Z] /scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/doc/afw.tag:1: warning: Internal inconsistency: scope for class lsst::afw::table::detail::SchemaMapperImpl::MakeKeyPair::apply not found!
[2019-09-11T00:43:09.526344Z] gw0 [248] / gw1 [248] / gw2 [248] / gw3 [248]
[2019-09-11T00:43:09.526383Z]
[2019-09-11T00:43:10.698405Z] ......................../scratch/bvan/lsst/distrib/ip_diffim/include/lsst/ip/diffim/KernelCandidateDetection.h:44: warning: documented empty return type of lsst::ip::diffim::KernelCandidateDetection::apply
[2019-09-11T00:43:11.598509Z] ............./scratch/bvan/lsst/distrib/ip_diffim/include/lsst/ip/diffim/KernelCandidateDetection.h:44: warning: documented empty return type of lsst::ip::diffim::KernelCandidateDetection::apply
[2019-09-11T00:43:13.697650Z] ......................g++ -o examples/pixelAccess -Wl,-rpath-link -Wl,/scratch/bvan/lsst/distrib/ip_diffim/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_deblender/tickets.DM-20864-g9abac69841+714ffc0011/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_algorithms/tickets.DM-20864-g039087be31+265561e40d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/coadd_utils/tickets.DM-20864-gb8d0fb083d+b554669148/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_config/tickets.DM-20864-g205f287ac7+148de8c309/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/lib:/u/gl/bvan/anaconda3/envs/scipl/lib:/usr/lib64/openmpi/lib -fno-lto -Wl,-rpath=/scratch/bvan/conda/envs/default/include/python3.7m/../../lib examples/pixelAccess.o -Llib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/lib -L/scratch/bvan/conda/envs/default/lib -L/scratch/bvan/conda/envs/default/lib/python3.7/config-3.7m-x86_64-linux-gnu -L/scratch/bvan/conda/envs/default/lib -lip_diffim -lmeas_base -lafw -lastshim -last -last_pal -last_grf_2.0 -last_grf_3.2 -last_grf_5.6 -last_grf3d -last_pass2 -last_err -lm -lboost_serialization -lcfitsio -lgsl -lgslcblas -lMinuit2 -ldaf_persistence -lpex_policy -lboost_filesystem -lboost_system -llog -llog4cxx -ldaf_base -lboost_regex -lgeom -lutils -lsphgeom -lpex_exceptions -lbase -lfftw3f -lfftw3 -lboost_math_c99 -lpthread
[2019-09-11T00:43:15.066630Z] ............. [ 29%]
[2019-09-11T00:43:16.330103Z] ...............g++ -o examples/spatialKernel -Wl,-rpath-link -Wl,/scratch/bvan/lsst/distrib/ip_diffim/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_deblender/tickets.DM-20864-g9abac69841+714ffc0011/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_algorithms/tickets.DM-20864-g039087be31+265561e40d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/coadd_utils/tickets.DM-20864-gb8d0fb083d+b554669148/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_config/tickets.DM-20864-g205f287ac7+148de8c309/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/lib:/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/lib:/u/gl/bvan/anaconda3/envs/scipl/lib:/usr/lib64/openmpi/lib -fno-lto -Wl,-rpath=/scratch/bvan/conda/envs/default/include/python3.7m/../../lib examples/spatialKernel.o -Llib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/meas_base/tickets.DM-20864-gb14c605fcc+ed2bfe9f0c/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/afw/tickets.DM-20864-g400a868217+1505646d80/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/astshim/tickets.DM-20864-ga356cd53fc+606ab73386/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_persistence/tickets.DM-20864-gd641c2a7cf+ea7c1ea1d5/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_policy/tickets.DM-20864-gcf878a0e59+664576772d/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/log/tickets.DM-20864-ga043d0ed60+f71d3fca8d/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/daf_base/tickets.DM-20864-ge16909b323+7383a3ca30/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/geom/tickets.DM-20864-gf8e05467e0+af3488d38e/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/sphgeom/tickets.DM-20864-g767cc9426a+8abac6ff70/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/pex_exceptions/tickets.DM-20864-g9970d2ee91+cb3f2ec5d4/lib -L/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/lib -L/scratch/bvan/conda/envs/default/lib -L/scratch/bvan/conda/envs/default/lib/python3.7/config-3.7m-x86_64-linux-gnu -L/scratch/bvan/conda/envs/default/lib -lip_diffim -lmeas_base -lafw -lastshim -last -last_pal -last_grf_2.0 -last_grf_3.2 -last_grf_5.6 -last_grf3d -last_pass2 -last_err -lm -lboost_serialization -lcfitsio -lgsl -lgslcblas -lMinuit2 -ldaf_persistence -lpex_policy -lboost_filesystem -lboost_system -llog -llog4cxx -ldaf_base -lboost_regex -lgeom -lutils -lsphgeom -lpex_exceptions -lbase -lfftw3f -lfftw3 -lboost_math_c99 -lpthread
[2019-09-11T00:43:21.004698Z] .FFFF................................F...........F....... [ 58%]
[2019-09-11T00:43:28.355210Z] ...........F.................F.....F.........s.......................... [ 87%]
[2019-09-11T00:43:46.677044Z] ..............F................. [100%]
[2019-09-11T00:43:46.677308Z] =================================== FAILURES ===================================
[2019-09-11T00:43:46.677872Z] _________________________ DipoleFitTest.testDipoleTask _________________________
[2019-09-11T00:43:46.677945Z] [gw2] linux -- Python 3.7.3 /scratch/bvan/conda/envs/default/bin/python3.7
[2019-09-11T00:43:46.677972Z]
[2019-09-11T00:43:46.678039Z] self = <test_dipoleFitter.DipoleFitTest testMethod=testDipoleTask>
[2019-09-11T00:43:46.678058Z]
[2019-09-11T00:43:46.678264Z] def testDipoleTask(self):
[2019-09-11T00:43:46.678325Z] """!Test the dipole fitting singleFramePlugin.
[2019-09-11T00:43:46.678359Z]
[2019-09-11T00:43:46.678408Z] Test that the resulting fluxes/centroids are entered into the
[2019-09-11T00:43:46.678456Z] correct slots of the catalog, and have values that are very
[2019-09-11T00:43:46.678503Z] close to the input values for both dipoles in the image.
[2019-09-11T00:43:46.678534Z]
[2019-09-11T00:43:46.678581Z] Also test that the resulting fluxes are close to those
[2019-09-11T00:43:46.678629Z] generated by the existing ip_diffim_DipoleMeasurement task
[2019-09-11T00:43:46.678665Z] (PsfDipoleFit).
[2019-09-11T00:43:46.678700Z] """
[2019-09-11T00:43:46.678739Z] params = DipoleTestImage()
[2019-09-11T00:43:46.678781Z] sources = self._runDetection(params)
[2019-09-11T00:43:46.678824Z] > self._checkTaskOutput(params, sources)
[2019-09-11T00:43:46.678843Z]
[2019-09-11T00:43:46.678902Z] tests/test_dipoleFitter.py:237:
[2019-09-11T00:43:46.678977Z] _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
[2019-09-11T00:43:46.679037Z] tests/test_dipoleFitter.py:189: in _checkTaskOutput
[2019-09-11T00:43:46.679076Z] params.flux[i], rtol=rtol)
[2019-09-11T00:43:46.679206Z] ../../../conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/python/lsst/utils/tests.py:588: in assertFloatsAlmostEqual
[2019-09-11T00:43:46.679282Z] testCase.fail("Non-finite values in lhs")
[2019-09-11T00:43:46.679329Z] E AssertionError: Non-finite values in lhs
[2019-09-11T00:43:46.679416Z] ----------------------------- Captured stdout call -----------------------------
[2019-09-11T00:43:46.679459Z] sourceDetection INFO: Detected 2 positive peaks in 2 footprints and 2 negative peaks in 2 footprints to 5.5 sigma
[2019-09-11T00:43:46.679465Z] sourceDetection.background WARN: Too few points in grid to constrain fit: min(nx, ny) < approxOrder) [min(4, 4) < 6]
[2019-09-11T00:43:46.679467Z] sourceDetection.background WARN: Reducing approxOrder to 3
[2019-09-11T00:43:46.679470Z] sourceDetection INFO: Resubtracting the background after object detection
[2019-09-11T00:43:46.679474Z] sourceDetection INFO: Detected 2 positive peaks in 2 footprints and 2 negative peaks in 2 footprints to 5.5 sigma
[2019-09-11T00:43:46.679476Z] sourceDetection.background WARN: Too few points in grid to constrain fit: min(nx, ny) < approxOrder) [min(4, 4) < 6]
[2019-09-11T00:43:46.679478Z] sourceDetection.background WARN: Reducing approxOrder to 3
[2019-09-11T00:43:46.679486Z] sourceDetection INFO: Resubtracting the background after object detection
[2019-09-11T00:43:46.679489Z] ip_diffim_DipoleFit INFO: Measuring 2 sources (2 parents, 0 children)
[2019-09-11T00:43:46.679491Z] ip_diffim_DipoleFit WARN: DipoleFitPlugin failed on record 5: dipole fit failure
[2019-09-11T00:43:46.679509Z] ip_diffim_DipoleFit WARN: DipoleFitPlugin failed on record 6: dipole fit failure
[2019-09-11T00:43:46.679603Z] ____________________ DipoleFitTest.testDipoleTaskNoNegImage ____________________
[2019-09-11T00:43:46.679656Z] [gw2] linux -- Python 3.7.3 /scratch/bvan/conda/envs/default/bin/python3.7
[2019-09-11T00:43:46.679678Z]
[2019-09-11T00:43:46.679743Z] self = <test_dipoleFitter.DipoleFitTest testMethod=testDipoleTaskNoNegImage>
[2019-09-11T00:43:46.679766Z]
[2019-09-11T00:43:46.679808Z] def testDipoleTaskNoNegImage(self):
[2019-09-11T00:43:46.679857Z] """!Test the dipole fitting singleFramePlugin in the case where no
[2019-09-11T00:43:46.679905Z] `negImage` is provided. It should be the same as above because
[2019-09-11T00:43:46.679951Z] `negImage` can be constructed from `posImage-diffim`.
[2019-09-11T00:43:46.679984Z]
[2019-09-11T00:43:46.680034Z] Test that the resulting fluxes/centroids are entered into the
[2019-09-11T00:43:46.680084Z] correct slots of the catalog, and have values that are very
[2019-09-11T00:43:46.680150Z] close to the input values for both dipoles in the image.
[2019-09-11T00:43:46.680183Z]
[2019-09-11T00:43:46.680232Z] Also test that the resulting fluxes are close to those
[2019-09-11T00:43:46.680282Z] generated by the existing ip_diffim_DipoleMeasurement task
[2019-09-11T00:43:46.680320Z] (PsfDipoleFit).
[2019-09-11T00:43:46.680355Z] """
[2019-09-11T00:43:46.680395Z] params = DipoleTestImage()
[2019-09-11T00:43:46.680435Z] params.testImage.negImage = None
[2019-09-11T00:43:46.680477Z] sources = self._runDetection(params)
[2019-09-11T00:43:46.680519Z] > self._checkTaskOutput(params, sources)
[2019-09-11T00:43:46.680538Z]
[2019-09-11T00:43:46.680591Z] tests/test_dipoleFitter.py:273:
[2019-09-11T00:43:46.680658Z] _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
[2019-09-11T00:43:46.680717Z] tests/test_dipoleFitter.py:189: in _checkTaskOutput
[2019-09-11T00:43:46.680756Z] params.flux[i], rtol=rtol)
[2019-09-11T00:43:46.680840Z] ../../../conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/python/lsst/utils/tests.py:588: in assertFloatsAlmostEqual
[2019-09-11T00:43:46.680886Z] testCase.fail("Non-finite values in lhs")
[2019-09-11T00:43:46.680928Z] E AssertionError: Non-finite values in lhs
[2019-09-11T00:43:46.680999Z] ----------------------------- Captured stdout call -----------------------------
[2019-09-11T00:43:46.681040Z] sourceDetection INFO: Detected 2 positive peaks in 2 footprints and 2 negative peaks in 2 footprints to 5.5 sigma
[2019-09-11T00:43:46.681044Z] sourceDetection.background WARN: Too few points in grid to constrain fit: min(nx, ny) < approxOrder) [min(4, 4) < 6]
[2019-09-11T00:43:46.681047Z] sourceDetection.background WARN: Reducing approxOrder to 3
[2019-09-11T00:43:46.681049Z] sourceDetection INFO: Resubtracting the background after object detection
[2019-09-11T00:43:46.681052Z] sourceDetection INFO: Detected 2 positive peaks in 2 footprints and 2 negative peaks in 2 footprints to 5.5 sigma
[2019-09-11T00:43:46.681054Z] sourceDetection.background WARN: Too few points in grid to constrain fit: min(nx, ny) < approxOrder) [min(4, 4) < 6]
[2019-09-11T00:43:46.681056Z] sourceDetection.background WARN: Reducing approxOrder to 3
[2019-09-11T00:43:46.681058Z] sourceDetection INFO: Resubtracting the background after object detection
[2019-09-11T00:43:46.681063Z] ip_diffim_DipoleFit INFO: Measuring 2 sources (2 parents, 0 children)
[2019-09-11T00:43:46.681066Z] ip_diffim_DipoleFit WARN: DipoleFitPlugin failed on record 5: dipole fit failure
[2019-09-11T00:43:46.681083Z] ip_diffim_DipoleFit WARN: DipoleFitPlugin failed on record 6: dipole fit failure
[2019-09-11T00:43:46.681272Z] ____________________ DipoleFitTest.testDipoleTaskNoPosImage ____________________
[2019-09-11T00:43:46.681345Z] [gw2] linux -- Python 3.7.3 /scratch/bvan/conda/envs/default/bin/python3.7
[2019-09-11T00:43:46.681372Z]
[2019-09-11T00:43:46.681446Z] self = <test_dipoleFitter.DipoleFitTest testMethod=testDipoleTaskNoPosImage>
[2019-09-11T00:43:46.681471Z]
[2019-09-11T00:43:46.681519Z] def testDipoleTaskNoPosImage(self):
[2019-09-11T00:43:46.681570Z] """!Test the dipole fitting singleFramePlugin in the case where no
[2019-09-11T00:43:46.681680Z] `posImage` is provided. It should be the same as above because
[2019-09-11T00:43:46.681732Z] `posImage` can be constructed from `diffim+negImage`.
[2019-09-11T00:43:46.681766Z]
[2019-09-11T00:43:46.681818Z] Test that the resulting fluxes/centroids are entered into the
[2019-09-11T00:43:46.681865Z] correct slots of the catalog, and have values that are very
[2019-09-11T00:43:46.681916Z] close to the input values for both dipoles in the image.
[2019-09-11T00:43:46.681951Z]
[2019-09-11T00:43:46.682012Z] Also test that the resulting fluxes are close to those
[2019-09-11T00:43:46.682060Z] generated by the existing ip_diffim_DipoleMeasurement task
[2019-09-11T00:43:46.682097Z] (PsfDipoleFit).
[2019-09-11T00:43:46.682130Z] """
[2019-09-11T00:43:46.682170Z] params = DipoleTestImage()
[2019-09-11T00:43:46.682211Z] params.testImage.posImage = None
[2019-09-11T00:43:46.682252Z] sources = self._runDetection(params)
[2019-09-11T00:43:46.682294Z] > self._checkTaskOutput(params, sources)
[2019-09-11T00:43:46.682313Z]
[2019-09-11T00:43:46.682368Z] tests/test_dipoleFitter.py:255:
[2019-09-11T00:43:46.682449Z] _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
[2019-09-11T00:43:46.682510Z] tests/test_dipoleFitter.py:189: in _checkTaskOutput
[2019-09-11T00:43:46.682549Z] params.flux[i], rtol=rtol)
[2019-09-11T00:43:46.682632Z] ../../../conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/python/lsst/utils/tests.py:588: in assertFloatsAlmostEqual
[2019-09-11T00:43:46.682675Z] testCase.fail("Non-finite values in lhs")
[2019-09-11T00:43:46.682717Z] E AssertionError: Non-finite values in lhs
[2019-09-11T00:43:46.682789Z] ----------------------------- Captured stdout call -----------------------------
[2019-09-11T00:43:46.682831Z] sourceDetection INFO: Detected 2 positive peaks in 2 footprints and 2 negative peaks in 2 footprints to 5.5 sigma
[2019-09-11T00:43:46.682835Z] sourceDetection.background WARN: Too few points in grid to constrain fit: min(nx, ny) < approxOrder) [min(4, 4) < 6]
[2019-09-11T00:43:46.682837Z] sourceDetection.background WARN: Reducing approxOrder to 3
[2019-09-11T00:43:46.682840Z] sourceDetection INFO: Resubtracting the background after object detection
[2019-09-11T00:43:46.682842Z] sourceDetection INFO: Detected 2 positive peaks in 2 footprints and 2 negative peaks in 2 footprints to 5.5 sigma
[2019-09-11T00:43:46.682844Z] sourceDetection.background WARN: Too few points in grid to constrain fit: min(nx, ny) < approxOrder) [min(4, 4) < 6]
[2019-09-11T00:43:46.682846Z] sourceDetection.background WARN: Reducing approxOrder to 3
[2019-09-11T00:43:46.682848Z] sourceDetection INFO: Resubtracting the background after object detection
[2019-09-11T00:43:46.682850Z] ip_diffim_DipoleFit INFO: Measuring 2 sources (2 parents, 0 children)
[2019-09-11T00:43:46.682852Z] ip_diffim_DipoleFit WARN: DipoleFitPlugin failed on record 5: dipole fit failure
[2019-09-11T00:43:46.682869Z] ip_diffim_DipoleFit WARN: DipoleFitPlugin failed on record 6: dipole fit failure
[2019-09-11T00:43:46.682995Z] __________________ DipoleFitTest.testDipoleTaskNoPreSubImages __________________
[2019-09-11T00:43:46.683050Z] [gw2] linux -- Python 3.7.3 /scratch/bvan/conda/envs/default/bin/python3.7
[2019-09-11T00:43:46.683072Z]
[2019-09-11T00:43:46.683139Z] self = <test_dipoleFitter.DipoleFitTest testMethod=testDipoleTaskNoPreSubImages>
[2019-09-11T00:43:46.683158Z]
[2019-09-11T00:43:46.683201Z] def testDipoleTaskNoPreSubImages(self):
[2019-09-11T00:43:46.683255Z] """!Test the dipole fitting singleFramePlugin in the case where no
[2019-09-11T00:43:46.683306Z] pre-subtraction data (`posImage` or `negImage`) are provided.
[2019-09-11T00:43:46.683354Z] In this case it just fits a dipole model to the diffim
[2019-09-11T00:43:46.683407Z] (dipole) image alone. Note that this test will only pass for
[2019-09-11T00:43:46.683448Z] widely-separated dipoles.
[2019-09-11T00:43:46.683480Z]
[2019-09-11T00:43:46.683528Z] Test that the resulting fluxes/centroids are entered into the
[2019-09-11T00:43:46.683575Z] correct slots of the catalog, and have values that are very
[2019-09-11T00:43:46.683621Z] close to the input values for both dipoles in the image.
[2019-09-11T00:43:46.683652Z]
[2019-09-11T00:43:46.683698Z] Also test that the resulting fluxes are close to those
[2019-09-11T00:43:46.683745Z] generated by the existing ip_diffim_DipoleMeasurement task
[2019-09-11T00:43:46.683782Z] (PsfDipoleFit).
[2019-09-11T00:43:46.683815Z] """
[2019-09-11T00:43:46.683854Z] params = DipoleTestImage()
[2019-09-11T00:43:46.683901Z] params.testImage.posImage = params.testImage.negImage = None
[2019-09-11T00:43:46.683943Z] sources = self._runDetection(params)
[2019-09-11T00:43:46.684002Z] > self._checkTaskOutput(params, sources)
[2019-09-11T00:43:46.684023Z]
[2019-09-11T00:43:46.684076Z] tests/test_dipoleFitter.py:293:
[2019-09-11T00:43:46.684149Z] _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
[2019-09-11T00:43:46.684209Z] tests/test_dipoleFitter.py:189: in _checkTaskOutput
[2019-09-11T00:43:46.684248Z] params.flux[i], rtol=rtol)
[2019-09-11T00:43:46.684334Z] ../../../conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/python/lsst/utils/tests.py:588: in assertFloatsAlmostEqual
[2019-09-11T00:43:46.684377Z] testCase.fail("Non-finite values in lhs")
[2019-09-11T00:43:46.684419Z] E AssertionError: Non-finite values in lhs
[2019-09-11T00:43:46.684488Z] ----------------------------- Captured stdout call -----------------------------
[2019-09-11T00:43:46.684529Z] sourceDetection INFO: Detected 2 positive peaks in 2 footprints and 2 negative peaks in 2 footprints to 5.5 sigma
[2019-09-11T00:43:46.684533Z] sourceDetection.background WARN: Too few points in grid to constrain fit: min(nx, ny) < approxOrder) [min(4, 4) < 6]
[2019-09-11T00:43:46.684536Z] sourceDetection.background WARN: Reducing approxOrder to 3
[2019-09-11T00:43:46.684538Z] sourceDetection INFO: Resubtracting the background after object detection
[2019-09-11T00:43:46.684540Z] sourceDetection INFO: Detected 2 positive peaks in 2 footprints and 2 negative peaks in 2 footprints to 5.5 sigma
[2019-09-11T00:43:46.684543Z] sourceDetection.background WARN: Too few points in grid to constrain fit: min(nx, ny) < approxOrder) [min(4, 4) < 6]
[2019-09-11T00:43:46.684545Z] sourceDetection.background WARN: Reducing approxOrder to 3
[2019-09-11T00:43:46.684547Z] sourceDetection INFO: Resubtracting the background after object detection
[2019-09-11T00:43:46.684549Z] ip_diffim_DipoleFit INFO: Measuring 2 sources (2 parents, 0 children)
[2019-09-11T00:43:46.684551Z] ip_diffim_DipoleFit WARN: DipoleFitPlugin failed on record 5: dipole fit failure
[2019-09-11T00:43:46.684568Z] ip_diffim_DipoleFit WARN: DipoleFitPlugin failed on record 6: dipole fit failure
[2019-09-11T00:43:46.684641Z] ______________________ DipoleFitTest.testDipoleAlgorithm _______________________
[2019-09-11T00:43:46.684699Z] [gw3] linux -- Python 3.7.3 /scratch/bvan/conda/envs/default/bin/python3.7
[2019-09-11T00:43:46.684720Z]
[2019-09-11T00:43:46.684789Z] self = <test_dipoleFitter.DipoleFitTest testMethod=testDipoleAlgorithm>
[2019-09-11T00:43:46.684808Z]
[2019-09-11T00:43:46.684853Z] def testDipoleAlgorithm(self):
[2019-09-11T00:43:46.684902Z] """!Test the dipole fitting algorithm directly (fitDipole()).
[2019-09-11T00:43:46.684937Z]
[2019-09-11T00:43:46.684997Z] Test that the resulting fluxes/centroids are very close to the
[2019-09-11T00:43:46.685047Z] input values for both dipoles in the image.
[2019-09-11T00:43:46.685087Z] """
[2019-09-11T00:43:46.685127Z] params = DipoleTestImage()
[2019-09-11T00:43:46.685174Z] catalog = params.testImage.detectDipoleSources(minBinSize=32)
[2019-09-11T00:43:46.685206Z]
[2019-09-11T00:43:46.685243Z] for s in catalog:
[2019-09-11T00:43:46.685305Z] fp = s.getFootprint()
[2019-09-11T00:43:46.685349Z] self.assertTrue(len(fp.getPeaks()) == 2)
[2019-09-11T00:43:46.685381Z]
[2019-09-11T00:43:46.685420Z] rtol = params.rtol
[2019-09-11T00:43:46.685459Z] offsets = params.offsets
[2019-09-11T00:43:46.685499Z] testImage = params.testImage
[2019-09-11T00:43:46.685540Z] for i, s in enumerate(catalog):
[2019-09-11T00:43:46.685593Z] alg = DipoleFitAlgorithm(testImage.diffim, testImage.posImage, testImage.negImage)
[2019-09-11T00:43:46.685634Z] result, _ = alg.fitDipole(
[2019-09-11T00:43:46.685680Z] s, rel_weight=0.5, separateNegParams=False,
[2019-09-11T00:43:46.685725Z] > verbose=params.verbose, display=params.display)
[2019-09-11T00:43:46.685744Z]
[2019-09-11T00:43:46.685797Z] tests/test_dipoleFitter.py:117:
[2019-09-11T00:43:46.685867Z] _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
[2019-09-11T00:43:46.685928Z] python/lsst/ip/diffim/dipoleFitTask.py:829: in fitDipole
[2019-09-11T00:43:46.685989Z] bgGradientOrder=bgGradientOrder, verbose=verbose)
[2019-09-11T00:43:46.686056Z] python/lsst/ip/diffim/dipoleFitTask.py:759: in fitDipoleImpl
[2019-09-11T00:43:46.686095Z] modelObj=dipoleModel)
[2019-09-11T00:43:46.686162Z] ../../../conda/envs/default/lib/python3.7/site-packages/lmfit/model.py:998: in fit
[2019-09-11T00:43:46.686206Z] kwargs[var] = _align(kwargs[var], mask, data)
[2019-09-11T00:43:46.686271Z] _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
[2019-09-11T00:43:46.686291Z]
[2019-09-11T00:43:46.686345Z] var = array([[[-16.5, -15.5, -14.5, ..., 14.5, 15.5, 16.5],
[2019-09-11T00:43:46.686349Z] [-16.5, -15.5, -14.5, ..., 14.5, 15.5, 16.5],
[2019-09-11T00:43:46.686351Z] ...5],
[2019-09-11T00:43:46.686354Z] [ 15.5, 15.5, 15.5, ..., 15.5, 15.5, 15.5],
[2019-09-11T00:43:46.686373Z] [ 16.5, 16.5, 16.5, ..., 16.5, 16.5, 16.5]]])
[2019-09-11T00:43:46.686425Z] mask = array([[[ True, True, True, ..., True, True, True],
[2019-09-11T00:43:46.686430Z] [ True, True, True, ..., True, True, True],
[2019-09-11T00:43:46.686432Z] ...e],
[2019-09-11T00:43:46.686434Z] [ True, True, True, ..., True, True, True],
[2019-09-11T00:43:46.686451Z] [ True, True, True, ..., True, True, True]]])
[2019-09-11T00:43:46.686485Z] data = array([ 0.42375344, -0.28085816, 0.48262876, ..., 1.304831 ,
[2019-09-11T00:43:46.686504Z] 2.4711592 , 3.6819208 ], dtype=float32)
[2019-09-11T00:43:46.686522Z]
[2019-09-11T00:43:46.686561Z] def _align(var, mask, data):
[2019-09-11T00:43:46.686609Z] """Align missing data, if pandas is available."""
[2019-09-11T00:43:46.686656Z] if isinstance(data, Series) and isinstance(var, Series):
[2019-09-11T00:43:46.686699Z] return var.reindex_like(data).dropna()
[2019-09-11T00:43:46.686737Z] elif mask is not None:
[2019-09-11T00:43:46.686780Z] > return var[mask]
[2019-09-11T00:43:46.686847Z] E IndexError: boolean index did not match indexed array along dimension 0; dimension is 2 but corresponding boolean dimension is 3
[2019-09-11T00:43:46.686866Z]
[2019-09-11T00:43:46.686932Z] ../../../conda/envs/default/lib/python3.7/site-packages/lmfit/model.py:34: IndexError
[2019-09-11T00:43:46.687012Z] ----------------------------- Captured stdout call -----------------------------
[2019-09-11T00:43:46.687052Z] sourceDetection INFO: Detected 2 positive peaks in 2 footprints and 2 negative peaks in 2 footprints to 5.5 sigma
[2019-09-11T00:43:46.687057Z] sourceDetection.background WARN: Too few points in grid to constrain fit: min(nx, ny) < approxOrder) [min(4, 4) < 6]
[2019-09-11T00:43:46.687059Z] sourceDetection.background WARN: Reducing approxOrder to 3
[2019-09-11T00:43:46.687076Z] sourceDetection INFO: Resubtracting the background after object detection
[2019-09-11T00:43:46.687148Z] __________________________ PsfMatchTestCases.testPca ___________________________
[2019-09-11T00:43:46.687201Z] [gw3] linux -- Python 3.7.3 /scratch/bvan/conda/envs/default/bin/python3.7
[2019-09-11T00:43:46.687222Z]
[2019-09-11T00:43:46.687292Z] self = <test_imagePsfMatch.PsfMatchTestCases testMethod=testPca>, nTerms = 3
[2019-09-11T00:43:46.687311Z]
[2019-09-11T00:43:46.687351Z] def testPca(self, nTerms=3):
[2019-09-11T00:43:46.687404Z] > tMi, sMi, sK, kcs, confake = diffimTools.makeFakeKernelSet(bgValue=self.bgValue)
[2019-09-11T00:43:46.687423Z]
[2019-09-11T00:43:46.687475Z] tests/test_imagePsfMatch.py:173:
[2019-09-11T00:43:46.687538Z] _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
[2019-09-11T00:43:46.687601Z] python/lsst/ip/diffim/diffimTools.py:238: in makeFakeKernelSet
[2019-09-11T00:43:46.687642Z] sim = makePoissonNoiseImage(sim)
[2019-09-11T00:43:46.687704Z] python/lsst/ip/diffim/diffimTools.py:88: in makePoissonNoiseImage
[2019-09-11T00:43:46.687745Z] intNoiseArr = rand.poisson(imArr)
[2019-09-11T00:43:46.687805Z] mtrand.pyx:3259: in numpy.random.mtrand.RandomState.poisson
[2019-09-11T00:43:46.687839Z] ???
[2019-09-11T00:43:46.687895Z] common.pyx:794: in numpy.random.common.disc
[2019-09-11T00:43:46.687928Z] ???
[2019-09-11T00:43:46.687995Z] common.pyx:601: in numpy.random.common.discrete_broadcast_d
[2019-09-11T00:43:46.688028Z] ???
[2019-09-11T00:43:46.688092Z] _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
[2019-09-11T00:43:46.688111Z]
[2019-09-11T00:43:46.688145Z] > ???
[2019-09-11T00:43:46.688184Z] E ValueError: lam value too large
[2019-09-11T00:43:46.688209Z]
[2019-09-11T00:43:46.688261Z] common.pyx:340: ValueError
[2019-09-11T00:43:46.688331Z] ----------------------------- Captured stdout call -----------------------------
[2019-09-11T00:43:46.688378Z] ip.diffim.generateAlardLuptonBasisList INFO: PSF sigmas are not available or scaling by fwhm disabled, falling back to config values
[2019-09-11T00:43:46.688397Z] TRACE1.ip.diffim.BasisLists.makeAlardLuptonBasisList DEBUG: Gaussian 0 : sigma 2.50 degree 2
[2019-09-11T00:43:46.688480Z] ___________________ PsfMatchTestCases.testSubtractExposures ____________________
[2019-09-11T00:43:46.688533Z] [gw3] linux -- Python 3.7.3 /scratch/bvan/conda/envs/default/bin/python3.7
[2019-09-11T00:43:46.688555Z]
[2019-09-11T00:43:46.688618Z] self = <test_imagePsfMatch.PsfMatchTestCases testMethod=testSubtractExposures>
[2019-09-11T00:43:46.688637Z]
[2019-09-11T00:43:46.688678Z] def testSubtractExposures(self):
[2019-09-11T00:43:46.688716Z] # Test all 3 options
[2019-09-11T00:43:46.688768Z] > tMi, sMi, sK, kcs, confake = diffimTools.makeFakeKernelSet(bgValue=self.bgValue)
[2019-09-11T00:43:46.688787Z]
[2019-09-11T00:43:46.688840Z] tests/test_imagePsfMatch.py:127:
[2019-09-11T00:43:46.688902Z] _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
[2019-09-11T00:43:46.688976Z] python/lsst/ip/diffim/diffimTools.py:238: in makeFakeKernelSet
[2019-09-11T00:43:46.689018Z] sim = makePoissonNoiseImage(sim)
[2019-09-11T00:43:46.689082Z] python/lsst/ip/diffim/diffimTools.py:88: in makePoissonNoiseImage
[2019-09-11T00:43:46.689122Z] intNoiseArr = rand.poisson(imArr)
[2019-09-11T00:43:46.689182Z] mtrand.pyx:3259: in numpy.random.mtrand.RandomState.poisson
[2019-09-11T00:43:46.689215Z] ???
[2019-09-11T00:43:46.689271Z] common.pyx:794: in numpy.random.common.disc
[2019-09-11T00:43:46.689304Z] ???
[2019-09-11T00:43:46.689370Z] common.pyx:601: in numpy.random.common.discrete_broadcast_d
[2019-09-11T00:43:46.689403Z] ???
[2019-09-11T00:43:46.689468Z] _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
[2019-09-11T00:43:46.689487Z]
[2019-09-11T00:43:46.689521Z] > ???
[2019-09-11T00:43:46.689561Z] E ValueError: lam value too large
[2019-09-11T00:43:46.689580Z]
[2019-09-11T00:43:46.689634Z] common.pyx:340: ValueError
[2019-09-11T00:43:46.689736Z] ----------------------------- Captured stdout call -----------------------------
[2019-09-11T00:43:46.689798Z] ip.diffim.generateAlardLuptonBasisList INFO: PSF sigmas are not available or scaling by fwhm disabled, falling back to config values
[2019-09-11T00:43:46.689821Z] TRACE1.ip.diffim.BasisLists.makeAlardLuptonBasisList DEBUG: Gaussian 0 : sigma 2.50 degree 2
[2019-09-11T00:43:46.689897Z] ________________________ PsfMatchTestCases.testWarping _________________________
[2019-09-11T00:43:46.689958Z] [gw3] linux -- Python 3.7.3 /scratch/bvan/conda/envs/default/bin/python3.7
[2019-09-11T00:43:46.689993Z]
[2019-09-11T00:43:46.690056Z] self = <test_imagePsfMatch.PsfMatchTestCases testMethod=testWarping>
[2019-09-11T00:43:46.690078Z]
[2019-09-11T00:43:46.690118Z] def testWarping(self):
[2019-09-11T00:43:46.690171Z] > tMi, sMi, sK, kcs, confake = diffimTools.makeFakeKernelSet(bgValue=self.bgValue)
[2019-09-11T00:43:46.690190Z]
[2019-09-11T00:43:46.690243Z] tests/test_imagePsfMatch.py:108:
[2019-09-11T00:43:46.690307Z] _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
[2019-09-11T00:43:46.690370Z] python/lsst/ip/diffim/diffimTools.py:238: in makeFakeKernelSet
[2019-09-11T00:43:46.690411Z] sim = makePoissonNoiseImage(sim)
[2019-09-11T00:43:46.690473Z] python/lsst/ip/diffim/diffimTools.py:88: in makePoissonNoiseImage
[2019-09-11T00:43:46.690514Z] intNoiseArr = rand.poisson(imArr)
[2019-09-11T00:43:46.690574Z] mtrand.pyx:3259: in numpy.random.mtrand.RandomState.poisson
[2019-09-11T00:43:46.690608Z] ???
[2019-09-11T00:43:46.690664Z] common.pyx:794: in numpy.random.common.disc
[2019-09-11T00:43:46.690697Z] ???
[2019-09-11T00:43:46.690757Z] common.pyx:601: in numpy.random.common.discrete_broadcast_d
[2019-09-11T00:43:46.690790Z] ???
[2019-09-11T00:43:46.690854Z] _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
[2019-09-11T00:43:46.690873Z]
[2019-09-11T00:43:46.690907Z] > ???
[2019-09-11T00:43:46.690946Z] E ValueError: lam value too large
[2019-09-11T00:43:46.690981Z]
[2019-09-11T00:43:46.691034Z] common.pyx:340: ValueError
[2019-09-11T00:43:46.691140Z] ----------------------------- Captured stdout call -----------------------------
[2019-09-11T00:43:46.691187Z] ip.diffim.generateAlardLuptonBasisList INFO: PSF sigmas are not available or scaling by fwhm disabled, falling back to config values
[2019-09-11T00:43:46.691207Z] TRACE1.ip.diffim.BasisLists.makeAlardLuptonBasisList DEBUG: Gaussian 0 : sigma 2.50 degree 2
[2019-09-11T00:43:46.691287Z] _____________________ PsfMatchTestCases.testMatchExposures _____________________
[2019-09-11T00:43:46.691340Z] [gw2] linux -- Python 3.7.3 /scratch/bvan/conda/envs/default/bin/python3.7
[2019-09-11T00:43:46.691361Z]
[2019-09-11T00:43:46.691424Z] self = <test_imagePsfMatch.PsfMatchTestCases testMethod=testMatchExposures>
[2019-09-11T00:43:46.691443Z]
[2019-09-11T00:43:46.691483Z] def testMatchExposures(self):
[2019-09-11T00:43:46.691521Z] # Only test 1 option
[2019-09-11T00:43:46.691574Z] > tMi, sMi, sK, kcs, confake = diffimTools.makeFakeKernelSet(bgValue=self.bgValue)
[2019-09-11T00:43:46.691593Z]
[2019-09-11T00:43:46.691646Z] tests/test_imagePsfMatch.py:155:
[2019-09-11T00:43:46.691710Z] _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
[2019-09-11T00:43:46.691772Z] python/lsst/ip/diffim/diffimTools.py:238: in makeFakeKernelSet
[2019-09-11T00:43:46.691816Z] sim = makePoissonNoiseImage(sim)
[2019-09-11T00:43:46.691882Z] python/lsst/ip/diffim/diffimTools.py:88: in makePoissonNoiseImage
[2019-09-11T00:43:46.691923Z] intNoiseArr = rand.poisson(imArr)
[2019-09-11T00:43:46.691993Z] mtrand.pyx:3259: in numpy.random.mtrand.RandomState.poisson
[2019-09-11T00:43:46.692027Z] ???
[2019-09-11T00:43:46.692083Z] common.pyx:794: in numpy.random.common.disc
[2019-09-11T00:43:46.692118Z] ???
[2019-09-11T00:43:46.692177Z] common.pyx:601: in numpy.random.common.discrete_broadcast_d
[2019-09-11T00:43:46.692210Z] ???
[2019-09-11T00:43:46.692275Z] _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
[2019-09-11T00:43:46.692295Z]
[2019-09-11T00:43:46.692329Z] > ???
[2019-09-11T00:43:46.692368Z] E ValueError: lam value too large
[2019-09-11T00:43:46.692387Z]
[2019-09-11T00:43:46.692447Z] common.pyx:340: ValueError
[2019-09-11T00:43:46.692515Z] ----------------------------- Captured stdout call -----------------------------
[2019-09-11T00:43:46.692558Z] ip.diffim.generateAlardLuptonBasisList INFO: PSF sigmas are not available or scaling by fwhm disabled, falling back to config values
[2019-09-11T00:43:46.692576Z] TRACE1.ip.diffim.BasisLists.makeAlardLuptonBasisList DEBUG: Gaussian 0 : sigma 2.50 degree 2
[2019-09-11T00:43:46.692652Z] __________________________ PsfMatchTestCases.testSnap __________________________
[2019-09-11T00:43:46.692710Z] [gw1] linux -- Python 3.7.3 /scratch/bvan/conda/envs/default/bin/python3.7
[2019-09-11T00:43:46.692732Z]
[2019-09-11T00:43:46.692791Z] self = <test_snapPsfMatch.PsfMatchTestCases testMethod=testSnap>
[2019-09-11T00:43:46.692810Z]
[2019-09-11T00:43:46.692847Z] def testSnap(self):
[2019-09-11T00:43:46.692900Z] > tMi, sMi, sK, kcs, confake = diffimTools.makeFakeKernelSet(bgValue=self.bgValue)
[2019-09-11T00:43:46.692919Z]
[2019-09-11T00:43:46.692987Z] tests/test_snapPsfMatch.py:100:
[2019-09-11T00:43:46.693051Z] _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
[2019-09-11T00:43:46.693113Z] python/lsst/ip/diffim/diffimTools.py:238: in makeFakeKernelSet
[2019-09-11T00:43:46.693154Z] sim = makePoissonNoiseImage(sim)
[2019-09-11T00:43:46.693216Z] python/lsst/ip/diffim/diffimTools.py:88: in makePoissonNoiseImage
[2019-09-11T00:43:46.693257Z] intNoiseArr = rand.poisson(imArr)
[2019-09-11T00:43:46.693318Z] mtrand.pyx:3259: in numpy.random.mtrand.RandomState.poisson
[2019-09-11T00:43:46.693351Z] ???
[2019-09-11T00:43:46.693410Z] common.pyx:794: in numpy.random.common.disc
[2019-09-11T00:43:46.693445Z] ???
[2019-09-11T00:43:46.693510Z] common.pyx:601: in numpy.random.common.discrete_broadcast_d
[2019-09-11T00:43:46.693544Z] ???
[2019-09-11T00:43:46.693612Z] _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
[2019-09-11T00:43:46.693636Z]
[2019-09-11T00:43:46.693671Z] > ???
[2019-09-11T00:43:46.693718Z] E ValueError: lam value too large
[2019-09-11T00:43:46.693738Z]
[2019-09-11T00:43:46.693788Z] common.pyx:340: ValueError
[2019-09-11T00:43:46.693857Z] ----------------------------- Captured stdout call -----------------------------
[2019-09-11T00:43:46.693899Z] ip.diffim.generateAlardLuptonBasisList INFO: PSF sigmas are not available or scaling by fwhm disabled, falling back to config values
[2019-09-11T00:43:46.693917Z] TRACE1.ip.diffim.BasisLists.makeAlardLuptonBasisList DEBUG: Gaussian 0 : sigma 2.50 degree 2
[2019-09-11T00:43:46.694077Z] =============================== warnings summary ===============================
[2019-09-11T00:43:46.694193Z] /scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/python/lsst/base/packages.py:31
[2019-09-11T00:43:46.694275Z] /scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/python/lsst/base/packages.py:31
[2019-09-11T00:43:46.694351Z] /scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/python/lsst/base/packages.py:31
[2019-09-11T00:43:46.694427Z] /scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/python/lsst/base/packages.py:31
[2019-09-11T00:43:46.694465Z] /scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/python/lsst/base/packages.py:31: DeprecationWarning: Using or importing the ABCs from 'collections' instead of from 'collections.abc' is deprecated, and in 3.8 it will stop working
[2019-09-11T00:43:46.694495Z] from collections import Mapping
[2019-09-11T00:43:46.694514Z]
[2019-09-11T00:43:46.694579Z] /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/past/types/oldstr.py:5
[2019-09-11T00:43:46.694642Z] /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/past/types/oldstr.py:5
[2019-09-11T00:43:46.694728Z] /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/past/types/oldstr.py:5
[2019-09-11T00:43:46.694790Z] /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/past/types/oldstr.py:5
[2019-09-11T00:43:46.694823Z] /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/past/types/oldstr.py:5: DeprecationWarning: Using or importing the ABCs from 'collections' instead of from 'collections.abc' is deprecated, and in 3.8 it will stop working
[2019-09-11T00:43:46.694842Z] from collections import Iterable
[2019-09-11T00:43:46.694860Z]
[2019-09-11T00:43:46.694921Z] /scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219
[2019-09-11T00:43:46.694999Z] /scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219
[2019-09-11T00:43:46.695060Z] /scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219
[2019-09-11T00:43:46.695119Z] /scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219
[2019-09-11T00:43:46.695178Z] /scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219
[2019-09-11T00:43:46.695237Z] /scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219
[2019-09-11T00:43:46.695302Z] /scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219
[2019-09-11T00:43:46.695365Z] /scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219
[2019-09-11T00:43:46.695426Z] /scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219
[2019-09-11T00:43:46.695486Z] /scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219
[2019-09-11T00:43:46.695553Z] /scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219
[2019-09-11T00:43:46.695617Z] /scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219
[2019-09-11T00:43:46.695677Z] /scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219
[2019-09-11T00:43:46.695736Z] /scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219
[2019-09-11T00:43:46.695795Z] /scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219
[2019-09-11T00:43:46.695853Z] /scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219
[2019-09-11T00:43:46.695912Z] /scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219
[2019-09-11T00:43:46.695979Z] /scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219
[2019-09-11T00:43:46.696038Z] /scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219
[2019-09-11T00:43:46.696098Z] /scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219
[2019-09-11T00:43:46.696157Z] /scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219
[2019-09-11T00:43:46.696216Z] /scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219
[2019-09-11T00:43:46.696245Z] /scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219: RuntimeWarning: numpy.ufunc size changed, may indicate binary incompatibility. Expected 192 from C header, got 216 from PyObject
[2019-09-11T00:43:46.696263Z] return f(*args, **kwds)
[2019-09-11T00:43:46.696282Z]
[2019-09-11T00:43:46.696366Z] /scratch/bvan/conda/envs/default/share/eups/Linux64/proxmin/tickets.DM-20864-gcf227cf51e+da39a3ee5e/lib/python/proxmin-0.5.5-py3.7.egg/proxmin/operators.py:121
[2019-09-11T00:43:46.696449Z] /scratch/bvan/conda/envs/default/share/eups/Linux64/proxmin/tickets.DM-20864-gcf227cf51e+da39a3ee5e/lib/python/proxmin-0.5.5-py3.7.egg/proxmin/operators.py:121
[2019-09-11T00:43:46.696531Z] /scratch/bvan/conda/envs/default/share/eups/Linux64/proxmin/tickets.DM-20864-gcf227cf51e+da39a3ee5e/lib/python/proxmin-0.5.5-py3.7.egg/proxmin/operators.py:121
[2019-09-11T00:43:46.696640Z] /scratch/bvan/conda/envs/default/share/eups/Linux64/proxmin/tickets.DM-20864-gcf227cf51e+da39a3ee5e/lib/python/proxmin-0.5.5-py3.7.egg/proxmin/operators.py:121
[2019-09-11T00:43:46.696724Z] /scratch/bvan/conda/envs/default/share/eups/Linux64/proxmin/tickets.DM-20864-gcf227cf51e+da39a3ee5e/lib/python/proxmin-0.5.5-py3.7.egg/proxmin/operators.py:121
[2019-09-11T00:43:46.696806Z] /scratch/bvan/conda/envs/default/share/eups/Linux64/proxmin/tickets.DM-20864-gcf227cf51e+da39a3ee5e/lib/python/proxmin-0.5.5-py3.7.egg/proxmin/operators.py:121
[2019-09-11T00:43:46.696888Z] /scratch/bvan/conda/envs/default/share/eups/Linux64/proxmin/tickets.DM-20864-gcf227cf51e+da39a3ee5e/lib/python/proxmin-0.5.5-py3.7.egg/proxmin/operators.py:121
[2019-09-11T00:43:46.696977Z] /scratch/bvan/conda/envs/default/share/eups/Linux64/proxmin/tickets.DM-20864-gcf227cf51e+da39a3ee5e/lib/python/proxmin-0.5.5-py3.7.egg/proxmin/operators.py:121
[2019-09-11T00:43:46.697081Z] /scratch/bvan/conda/envs/default/share/eups/Linux64/proxmin/tickets.DM-20864-gcf227cf51e+da39a3ee5e/lib/python/proxmin-0.5.5-py3.7.egg/proxmin/operators.py:121: DeprecationWarning: invalid escape sequence \s
[2019-09-11T00:43:46.697108Z]
[2019-09-11T00:43:46.697180Z] /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/lmfit/model.py:278
[2019-09-11T00:43:46.697254Z] /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/lmfit/model.py:278
[2019-09-11T00:43:46.697318Z] /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/lmfit/model.py:278
[2019-09-11T00:43:46.697383Z] /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/lmfit/model.py:278
[2019-09-11T00:43:46.697444Z] /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/lmfit/model.py:278
[2019-09-11T00:43:46.697509Z] /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/lmfit/model.py:278
[2019-09-11T00:43:46.697570Z] /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/lmfit/model.py:278
[2019-09-11T00:43:46.697631Z] /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/lmfit/model.py:278
[2019-09-11T00:43:46.697692Z] /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/lmfit/model.py:278
[2019-09-11T00:43:46.697726Z] /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/lmfit/model.py:278: FutureWarning: The keyword 'missing' is deprecated as of lmfit 0.9.13 and will be removed in the next release. Use 'nan_policy' instead.
[2019-09-11T00:43:46.697744Z] "Use 'nan_policy' instead.", FutureWarning)
[2019-09-11T00:43:46.697762Z]
[2019-09-11T00:43:46.697832Z] /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/lmfit/minimizer.py:2105
[2019-09-11T00:43:46.697898Z] /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/lmfit/minimizer.py:2105
[2019-09-11T00:43:46.697978Z] /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/lmfit/minimizer.py:2105
[2019-09-11T00:43:46.698048Z] /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/lmfit/minimizer.py:2105
[2019-09-11T00:43:46.698124Z] /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/lmfit/minimizer.py:2105
[2019-09-11T00:43:46.698187Z] /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/lmfit/minimizer.py:2105
[2019-09-11T00:43:46.698256Z] /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/lmfit/minimizer.py:2105
[2019-09-11T00:43:46.698327Z] /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/lmfit/minimizer.py:2105
[2019-09-11T00:43:46.698391Z] /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/lmfit/minimizer.py:2105
[2019-09-11T00:43:46.698421Z] /scratch/bvan/conda/envs/default/lib/python3.7/site-packages/lmfit/minimizer.py:2105: FutureWarning: The option 'drop' is deprecated as of lmfit 0.9.13 and will be removed in the next release. Use 'omit' instead.
[2019-09-11T00:43:46.698441Z] "instead.", FutureWarning)
[2019-09-11T00:43:46.698460Z]
[2019-09-11T00:43:46.698504Z] -- Docs: https://docs.pytest.org/en/latest/warnings.html
[2019-09-11T00:43:46.698696Z] - generated xml file: /scratch/bvan/lsst/distrib/ip_diffim/tests/.tests/pytest-ip_diffim.xml -
[2019-09-11T00:43:46.698741Z]
[2019-09-11T00:43:46.698746Z] ----------- coverage: platform linux, python 3.7.3-final-0 -----------
[2019-09-11T00:43:46.698748Z] Name Stmts Miss Branch BrPart Cover
[2019-09-11T00:43:46.698772Z] -------------------------------------------------------------------------------------
[2019-09-11T00:43:46.698775Z] python/lsst/__init__.py 3 0 0 0 100%
[2019-09-11T00:43:46.698777Z] python/lsst/gdb/__init__.py 3 0 0 0 100%
[2019-09-11T00:43:46.698779Z] python/lsst/gdb/ip/__init__.py 3 0 0 0 100%
[2019-09-11T00:43:46.698781Z] python/lsst/gdb/ip/diffim/__init__.py 0 0 0 0 100%
[2019-09-11T00:43:46.698783Z] python/lsst/ip/__init__.py 3 0 0 0 100%
[2019-09-11T00:43:46.698785Z] python/lsst/ip/diffim/__init__.py 23 0 0 0 100%
[2019-09-11T00:43:46.698787Z] python/lsst/ip/diffim/dcrModel.py 222 90 84 10 52%
[2019-09-11T00:43:46.698789Z] python/lsst/ip/diffim/deprecated.py 19 2 8 1 89%
[2019-09-11T00:43:46.698791Z] python/lsst/ip/diffim/detail/__init__.py 1 0 0 0 100%
[2019-09-11T00:43:46.698793Z] python/lsst/ip/diffim/detail/diffimDetailLib.py 11 0 0 0 100%
[2019-09-11T00:43:46.698795Z] python/lsst/ip/diffim/diaCatalogSourceSelector.py 93 24 44 11 72%
[2019-09-11T00:43:46.698797Z] python/lsst/ip/diffim/diaSourceAnalysis.py 75 56 14 0 21%
[2019-09-11T00:43:46.698799Z] python/lsst/ip/diffim/diffimLib.py 15 0 0 0 100%
[2019-09-11T00:43:46.698800Z] python/lsst/ip/diffim/diffimTools.py 262 96 72 8 59%
[2019-09-11T00:43:46.698802Z] python/lsst/ip/diffim/dipoleFitTask.py 435 190 132 25 53%
[2019-09-11T00:43:46.698804Z] python/lsst/ip/diffim/dipoleMeasurement.py 168 45 46 6 66%
[2019-09-11T00:43:46.698807Z] python/lsst/ip/diffim/getTemplate.py 103 80 32 0 17%
[2019-09-11T00:43:46.698815Z] python/lsst/ip/diffim/imageDecorrelation.py 223 37 52 18 75%
[2019-09-11T00:43:46.698818Z] python/lsst/ip/diffim/imageMapReduce.py 262 28 98 8 88%
[2019-09-11T00:43:46.698820Z] python/lsst/ip/diffim/imagePsfMatch.py 266 74 80 28 67%
[2019-09-11T00:43:46.698822Z] python/lsst/ip/diffim/kernelCandidateQa.py 169 153 50 0 7%
[2019-09-11T00:43:46.698824Z] python/lsst/ip/diffim/makeKernelBasisList.py 107 14 47 11 84%
[2019-09-11T00:43:46.698826Z] python/lsst/ip/diffim/metrics.py 45 0 10 0 100%
[2019-09-11T00:43:46.698828Z] python/lsst/ip/diffim/modelPsfMatch.py 149 8 36 7 92%
[2019-09-11T00:43:46.698830Z] python/lsst/ip/diffim/psfMatch.py 294 93 130 17 68%
[2019-09-11T00:43:46.698835Z] python/lsst/ip/diffim/snapPsfMatch.py 30 1 0 0 97%
[2019-09-11T00:43:46.698839Z] python/lsst/ip/diffim/utils.py 685 582 202 5 13%
[2019-09-11T00:43:46.698843Z] python/lsst/ip/diffim/version.py 5 0 0 0 100%
[2019-09-11T00:43:46.698846Z] python/lsst/ip/diffim/zogy.py 469 62 94 22 84%
[2019-09-11T00:43:46.698848Z] tests/test_assessSpatialKernelVisitor.py 94 2 5 1 97%
[2019-09-11T00:43:46.698850Z] tests/test_basisLists.py 166 12 18 1 93%
[2019-09-11T00:43:46.698852Z] tests/test_buildSingleKernelVisitor.py 194 8 14 1 96%
[2019-09-11T00:43:46.698854Z] tests/test_buildSpatialKernelVisitor.py 111 3 22 1 97%
[2019-09-11T00:43:46.698856Z] tests/test_compareToHotpants.py 302 2 84 1 99%
[2019-09-11T00:43:46.698858Z] tests/test_dcrModel.py 318 3 66 2 99%
[2019-09-11T00:43:46.698860Z] tests/test_diaCatalogSourceSelector.py 79 2 10 2 96%
[2019-09-11T00:43:46.698862Z] tests/test_dipole.py 271 20 28 10 90%
[2019-09-11T00:43:46.698864Z] tests/test_dipoleFitter.py 111 19 12 4 81%
[2019-09-11T00:43:46.698866Z] tests/test_findSetBits.py 49 2 2 1 94%
[2019-09-11T00:43:46.698868Z] tests/test_imageDecorrelation.py 224 10 22 8 93%
[2019-09-11T00:43:46.698870Z] tests/test_imageMapReduce.py 283 6 56 5 97%
[2019-09-11T00:43:46.698871Z] tests/test_imagePsfMatch.py 166 87 14 1 49%
[2019-09-11T00:43:46.698877Z] tests/test_imageStatistics.py 125 2 38 3 97%
[2019-09-11T00:43:46.698879Z] tests/test_imageSubtract.py 75 4 14 3 92%
[2019-09-11T00:43:46.698890Z] tests/test_ipDiffimConfig.py 41 2 2 1 93%
[2019-09-11T00:43:46.698892Z] tests/test_kernelCandidateAndSolution.py 318 35 54 3 90%
[2019-09-11T00:43:46.698894Z] tests/test_kernelCandidateDetection.py 76 4 12 3 92%
[2019-09-11T00:43:46.698896Z] tests/test_kernelPca.py 168 2 30 1 98%
[2019-09-11T00:43:46.698898Z] tests/test_kernelSumVisitor.py 100 3 20 1 97%
[2019-09-11T00:43:46.698900Z] tests/test_metrics.py 104 2 4 1 97%
[2019-09-11T00:43:46.698913Z] tests/test_modelPsfMatch.py 91 3 10 1 96%
[2019-09-11T00:43:46.698916Z] tests/test_snapPsfMatch.py 84 32 2 1 62%
[2019-09-11T00:43:46.698918Z] tests/test_subtractExposures.py 170 7 40 5 94%
[2019-09-11T00:43:46.698921Z] tests/test_zogy.py 164 2 10 1 98%
[2019-09-11T00:43:46.698924Z] -------------------------------------------------------------------------------------
[2019-09-11T00:43:46.698928Z] TOTAL 8027 1909 1820 239 73%
[2019-09-11T00:43:46.698931Z] Coverage HTML written to dir tests/.tests/pytest-ip_diffim.xml-htmlcov
[2019-09-11T00:43:46.698933Z] Coverage XML written to file tests/.tests/pytest-ip_diffim.xml-cov-ip_diffim.xml
[2019-09-11T00:43:46.698935Z]
[2019-09-11T00:43:46.699213Z] ======== 10 failed, 237 passed, 1 skipped, 56 warnings in 42.90 seconds ========
[2019-09-11T00:43:46.704094Z] Coverage.py warning: No data was collected. (no-data-collected)
[2019-09-11T00:43:46.790561Z] Global pytest run: failed with 1
[2019-09-11T00:43:46.806576Z] Failed test output:
[2019-09-11T00:43:46.809392Z] Global pytest output is in /scratch/bvan/lsst/distrib/ip_diffim/tests/.tests/pytest-ip_diffim.xml.failed
[2019-09-11T00:43:46.809408Z] The following tests failed:
[2019-09-11T00:43:46.811237Z] /scratch/bvan/lsst/distrib/ip_diffim/tests/.tests/pytest-ip_diffim.xml.failed
[2019-09-11T00:43:46.811455Z] 1 tests failed
[2019-09-11T00:43:46.812509Z] scons: *** [checkTestStatus] Error 1
[2019-09-11T00:43:46.815987Z] scons: building terminated because of errors.
============================= test session starts ==============================
platform linux -- Python 3.7.3, pytest-5.0.1, py-1.8.0, pluggy-0.12.0
rootdir: /scratch/bvan/lsst/distrib/ip_diffim, inifile: setup.cfg
plugins: doctestplus-0.3.0, flake8-1.0.4, xdist-1.29.0, remotedata-0.3.1, forked-1.0.2, openfiles-0.4.0, session2file-0.1.9, arraydiff-0.3, cov-2.7.1
gw0 I / gw1 I / gw2 I / gw3 I
gw0 [248] / gw1 [248] / gw2 [248] / gw3 [248]
........................................................................ [ 29%]
................FFFF................................F...........F....... [ 58%]
...........F.................F.....F.........s.......................... [ 87%]
..............F................. [100%]
=================================== FAILURES ===================================
_________________________ DipoleFitTest.testDipoleTask _________________________
[gw2] linux -- Python 3.7.3 /scratch/bvan/conda/envs/default/bin/python3.7
self = <test_dipoleFitter.DipoleFitTest testMethod=testDipoleTask>
def testDipoleTask(self):
"""!Test the dipole fitting singleFramePlugin.
Test that the resulting fluxes/centroids are entered into the
correct slots of the catalog, and have values that are very
close to the input values for both dipoles in the image.
Also test that the resulting fluxes are close to those
generated by the existing ip_diffim_DipoleMeasurement task
(PsfDipoleFit).
"""
params = DipoleTestImage()
sources = self._runDetection(params)
> self._checkTaskOutput(params, sources)
tests/test_dipoleFitter.py:237:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
tests/test_dipoleFitter.py:189: in _checkTaskOutput
params.flux[i], rtol=rtol)
../../../conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/python/lsst/utils/tests.py:588: in assertFloatsAlmostEqual
testCase.fail("Non-finite values in lhs")
E AssertionError: Non-finite values in lhs
----------------------------- Captured stdout call -----------------------------
sourceDetection INFO: Detected 2 positive peaks in 2 footprints and 2 negative peaks in 2 footprints to 5.5 sigma
sourceDetection.background WARN: Too few points in grid to constrain fit: min(nx, ny) < approxOrder) [min(4, 4) < 6]
sourceDetection.background WARN: Reducing approxOrder to 3
sourceDetection INFO: Resubtracting the background after object detection
sourceDetection INFO: Detected 2 positive peaks in 2 footprints and 2 negative peaks in 2 footprints to 5.5 sigma
sourceDetection.background WARN: Too few points in grid to constrain fit: min(nx, ny) < approxOrder) [min(4, 4) < 6]
sourceDetection.background WARN: Reducing approxOrder to 3
sourceDetection INFO: Resubtracting the background after object detection
ip_diffim_DipoleFit INFO: Measuring 2 sources (2 parents, 0 children)
ip_diffim_DipoleFit WARN: DipoleFitPlugin failed on record 5: dipole fit failure
ip_diffim_DipoleFit WARN: DipoleFitPlugin failed on record 6: dipole fit failure
____________________ DipoleFitTest.testDipoleTaskNoNegImage ____________________
[gw2] linux -- Python 3.7.3 /scratch/bvan/conda/envs/default/bin/python3.7
self = <test_dipoleFitter.DipoleFitTest testMethod=testDipoleTaskNoNegImage>
def testDipoleTaskNoNegImage(self):
"""!Test the dipole fitting singleFramePlugin in the case where no
`negImage` is provided. It should be the same as above because
`negImage` can be constructed from `posImage-diffim`.
Test that the resulting fluxes/centroids are entered into the
correct slots of the catalog, and have values that are very
close to the input values for both dipoles in the image.
Also test that the resulting fluxes are close to those
generated by the existing ip_diffim_DipoleMeasurement task
(PsfDipoleFit).
"""
params = DipoleTestImage()
params.testImage.negImage = None
sources = self._runDetection(params)
> self._checkTaskOutput(params, sources)
tests/test_dipoleFitter.py:273:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
tests/test_dipoleFitter.py:189: in _checkTaskOutput
params.flux[i], rtol=rtol)
../../../conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/python/lsst/utils/tests.py:588: in assertFloatsAlmostEqual
testCase.fail("Non-finite values in lhs")
E AssertionError: Non-finite values in lhs
----------------------------- Captured stdout call -----------------------------
sourceDetection INFO: Detected 2 positive peaks in 2 footprints and 2 negative peaks in 2 footprints to 5.5 sigma
sourceDetection.background WARN: Too few points in grid to constrain fit: min(nx, ny) < approxOrder) [min(4, 4) < 6]
sourceDetection.background WARN: Reducing approxOrder to 3
sourceDetection INFO: Resubtracting the background after object detection
sourceDetection INFO: Detected 2 positive peaks in 2 footprints and 2 negative peaks in 2 footprints to 5.5 sigma
sourceDetection.background WARN: Too few points in grid to constrain fit: min(nx, ny) < approxOrder) [min(4, 4) < 6]
sourceDetection.background WARN: Reducing approxOrder to 3
sourceDetection INFO: Resubtracting the background after object detection
ip_diffim_DipoleFit INFO: Measuring 2 sources (2 parents, 0 children)
ip_diffim_DipoleFit WARN: DipoleFitPlugin failed on record 5: dipole fit failure
ip_diffim_DipoleFit WARN: DipoleFitPlugin failed on record 6: dipole fit failure
____________________ DipoleFitTest.testDipoleTaskNoPosImage ____________________
[gw2] linux -- Python 3.7.3 /scratch/bvan/conda/envs/default/bin/python3.7
self = <test_dipoleFitter.DipoleFitTest testMethod=testDipoleTaskNoPosImage>
def testDipoleTaskNoPosImage(self):
"""!Test the dipole fitting singleFramePlugin in the case where no
`posImage` is provided. It should be the same as above because
`posImage` can be constructed from `diffim+negImage`.
Test that the resulting fluxes/centroids are entered into the
correct slots of the catalog, and have values that are very
close to the input values for both dipoles in the image.
Also test that the resulting fluxes are close to those
generated by the existing ip_diffim_DipoleMeasurement task
(PsfDipoleFit).
"""
params = DipoleTestImage()
params.testImage.posImage = None
sources = self._runDetection(params)
> self._checkTaskOutput(params, sources)
tests/test_dipoleFitter.py:255:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
tests/test_dipoleFitter.py:189: in _checkTaskOutput
params.flux[i], rtol=rtol)
../../../conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/python/lsst/utils/tests.py:588: in assertFloatsAlmostEqual
testCase.fail("Non-finite values in lhs")
E AssertionError: Non-finite values in lhs
----------------------------- Captured stdout call -----------------------------
sourceDetection INFO: Detected 2 positive peaks in 2 footprints and 2 negative peaks in 2 footprints to 5.5 sigma
sourceDetection.background WARN: Too few points in grid to constrain fit: min(nx, ny) < approxOrder) [min(4, 4) < 6]
sourceDetection.background WARN: Reducing approxOrder to 3
sourceDetection INFO: Resubtracting the background after object detection
sourceDetection INFO: Detected 2 positive peaks in 2 footprints and 2 negative peaks in 2 footprints to 5.5 sigma
sourceDetection.background WARN: Too few points in grid to constrain fit: min(nx, ny) < approxOrder) [min(4, 4) < 6]
sourceDetection.background WARN: Reducing approxOrder to 3
sourceDetection INFO: Resubtracting the background after object detection
ip_diffim_DipoleFit INFO: Measuring 2 sources (2 parents, 0 children)
ip_diffim_DipoleFit WARN: DipoleFitPlugin failed on record 5: dipole fit failure
ip_diffim_DipoleFit WARN: DipoleFitPlugin failed on record 6: dipole fit failure
__________________ DipoleFitTest.testDipoleTaskNoPreSubImages __________________
[gw2] linux -- Python 3.7.3 /scratch/bvan/conda/envs/default/bin/python3.7
self = <test_dipoleFitter.DipoleFitTest testMethod=testDipoleTaskNoPreSubImages>
def testDipoleTaskNoPreSubImages(self):
"""!Test the dipole fitting singleFramePlugin in the case where no
pre-subtraction data (`posImage` or `negImage`) are provided.
In this case it just fits a dipole model to the diffim
(dipole) image alone. Note that this test will only pass for
widely-separated dipoles.
Test that the resulting fluxes/centroids are entered into the
correct slots of the catalog, and have values that are very
close to the input values for both dipoles in the image.
Also test that the resulting fluxes are close to those
generated by the existing ip_diffim_DipoleMeasurement task
(PsfDipoleFit).
"""
params = DipoleTestImage()
params.testImage.posImage = params.testImage.negImage = None
sources = self._runDetection(params)
> self._checkTaskOutput(params, sources)
tests/test_dipoleFitter.py:293:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
tests/test_dipoleFitter.py:189: in _checkTaskOutput
params.flux[i], rtol=rtol)
../../../conda/envs/default/share/eups/Linux64/utils/tickets.DM-20864-g2207ba3768+48c6bae73b/python/lsst/utils/tests.py:588: in assertFloatsAlmostEqual
testCase.fail("Non-finite values in lhs")
E AssertionError: Non-finite values in lhs
----------------------------- Captured stdout call -----------------------------
sourceDetection INFO: Detected 2 positive peaks in 2 footprints and 2 negative peaks in 2 footprints to 5.5 sigma
sourceDetection.background WARN: Too few points in grid to constrain fit: min(nx, ny) < approxOrder) [min(4, 4) < 6]
sourceDetection.background WARN: Reducing approxOrder to 3
sourceDetection INFO: Resubtracting the background after object detection
sourceDetection INFO: Detected 2 positive peaks in 2 footprints and 2 negative peaks in 2 footprints to 5.5 sigma
sourceDetection.background WARN: Too few points in grid to constrain fit: min(nx, ny) < approxOrder) [min(4, 4) < 6]
sourceDetection.background WARN: Reducing approxOrder to 3
sourceDetection INFO: Resubtracting the background after object detection
ip_diffim_DipoleFit INFO: Measuring 2 sources (2 parents, 0 children)
ip_diffim_DipoleFit WARN: DipoleFitPlugin failed on record 5: dipole fit failure
ip_diffim_DipoleFit WARN: DipoleFitPlugin failed on record 6: dipole fit failure
______________________ DipoleFitTest.testDipoleAlgorithm _______________________
[gw3] linux -- Python 3.7.3 /scratch/bvan/conda/envs/default/bin/python3.7
self = <test_dipoleFitter.DipoleFitTest testMethod=testDipoleAlgorithm>
def testDipoleAlgorithm(self):
"""!Test the dipole fitting algorithm directly (fitDipole()).
Test that the resulting fluxes/centroids are very close to the
input values for both dipoles in the image.
"""
params = DipoleTestImage()
catalog = params.testImage.detectDipoleSources(minBinSize=32)
for s in catalog:
fp = s.getFootprint()
self.assertTrue(len(fp.getPeaks()) == 2)
rtol = params.rtol
offsets = params.offsets
testImage = params.testImage
for i, s in enumerate(catalog):
alg = DipoleFitAlgorithm(testImage.diffim, testImage.posImage, testImage.negImage)
result, _ = alg.fitDipole(
s, rel_weight=0.5, separateNegParams=False,
> verbose=params.verbose, display=params.display)
tests/test_dipoleFitter.py:117:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
python/lsst/ip/diffim/dipoleFitTask.py:829: in fitDipole
bgGradientOrder=bgGradientOrder, verbose=verbose)
python/lsst/ip/diffim/dipoleFitTask.py:759: in fitDipoleImpl
modelObj=dipoleModel)
../../../conda/envs/default/lib/python3.7/site-packages/lmfit/model.py:998: in fit
kwargs[var] = _align(kwargs[var], mask, data)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
var = array([[[-16.5, -15.5, -14.5, ..., 14.5, 15.5, 16.5],
[-16.5, -15.5, -14.5, ..., 14.5, 15.5, 16.5],
...5],
[ 15.5, 15.5, 15.5, ..., 15.5, 15.5, 15.5],
[ 16.5, 16.5, 16.5, ..., 16.5, 16.5, 16.5]]])
mask = array([[[ True, True, True, ..., True, True, True],
[ True, True, True, ..., True, True, True],
...e],
[ True, True, True, ..., True, True, True],
[ True, True, True, ..., True, True, True]]])
data = array([ 0.42375344, -0.28085816, 0.48262876, ..., 1.304831 ,
2.4711592 , 3.6819208 ], dtype=float32)
def _align(var, mask, data):
"""Align missing data, if pandas is available."""
if isinstance(data, Series) and isinstance(var, Series):
return var.reindex_like(data).dropna()
elif mask is not None:
> return var[mask]
E IndexError: boolean index did not match indexed array along dimension 0; dimension is 2 but corresponding boolean dimension is 3
../../../conda/envs/default/lib/python3.7/site-packages/lmfit/model.py:34: IndexError
----------------------------- Captured stdout call -----------------------------
sourceDetection INFO: Detected 2 positive peaks in 2 footprints and 2 negative peaks in 2 footprints to 5.5 sigma
sourceDetection.background WARN: Too few points in grid to constrain fit: min(nx, ny) < approxOrder) [min(4, 4) < 6]
sourceDetection.background WARN: Reducing approxOrder to 3
sourceDetection INFO: Resubtracting the background after object detection
__________________________ PsfMatchTestCases.testPca ___________________________
[gw3] linux -- Python 3.7.3 /scratch/bvan/conda/envs/default/bin/python3.7
self = <test_imagePsfMatch.PsfMatchTestCases testMethod=testPca>, nTerms = 3
def testPca(self, nTerms=3):
> tMi, sMi, sK, kcs, confake = diffimTools.makeFakeKernelSet(bgValue=self.bgValue)
tests/test_imagePsfMatch.py:173:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
python/lsst/ip/diffim/diffimTools.py:238: in makeFakeKernelSet
sim = makePoissonNoiseImage(sim)
python/lsst/ip/diffim/diffimTools.py:88: in makePoissonNoiseImage
intNoiseArr = rand.poisson(imArr)
mtrand.pyx:3259: in numpy.random.mtrand.RandomState.poisson
???
common.pyx:794: in numpy.random.common.disc
???
common.pyx:601: in numpy.random.common.discrete_broadcast_d
???
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
> ???
E ValueError: lam value too large
common.pyx:340: ValueError
----------------------------- Captured stdout call -----------------------------
ip.diffim.generateAlardLuptonBasisList INFO: PSF sigmas are not available or scaling by fwhm disabled, falling back to config values
TRACE1.ip.diffim.BasisLists.makeAlardLuptonBasisList DEBUG: Gaussian 0 : sigma 2.50 degree 2
___________________ PsfMatchTestCases.testSubtractExposures ____________________
[gw3] linux -- Python 3.7.3 /scratch/bvan/conda/envs/default/bin/python3.7
self = <test_imagePsfMatch.PsfMatchTestCases testMethod=testSubtractExposures>
def testSubtractExposures(self):
# Test all 3 options
> tMi, sMi, sK, kcs, confake = diffimTools.makeFakeKernelSet(bgValue=self.bgValue)
tests/test_imagePsfMatch.py:127:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
python/lsst/ip/diffim/diffimTools.py:238: in makeFakeKernelSet
sim = makePoissonNoiseImage(sim)
python/lsst/ip/diffim/diffimTools.py:88: in makePoissonNoiseImage
intNoiseArr = rand.poisson(imArr)
mtrand.pyx:3259: in numpy.random.mtrand.RandomState.poisson
???
common.pyx:794: in numpy.random.common.disc
???
common.pyx:601: in numpy.random.common.discrete_broadcast_d
???
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
> ???
E ValueError: lam value too large
common.pyx:340: ValueError
----------------------------- Captured stdout call -----------------------------
ip.diffim.generateAlardLuptonBasisList INFO: PSF sigmas are not available or scaling by fwhm disabled, falling back to config values
TRACE1.ip.diffim.BasisLists.makeAlardLuptonBasisList DEBUG: Gaussian 0 : sigma 2.50 degree 2
________________________ PsfMatchTestCases.testWarping _________________________
[gw3] linux -- Python 3.7.3 /scratch/bvan/conda/envs/default/bin/python3.7
self = <test_imagePsfMatch.PsfMatchTestCases testMethod=testWarping>
def testWarping(self):
> tMi, sMi, sK, kcs, confake = diffimTools.makeFakeKernelSet(bgValue=self.bgValue)
tests/test_imagePsfMatch.py:108:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
python/lsst/ip/diffim/diffimTools.py:238: in makeFakeKernelSet
sim = makePoissonNoiseImage(sim)
python/lsst/ip/diffim/diffimTools.py:88: in makePoissonNoiseImage
intNoiseArr = rand.poisson(imArr)
mtrand.pyx:3259: in numpy.random.mtrand.RandomState.poisson
???
common.pyx:794: in numpy.random.common.disc
???
common.pyx:601: in numpy.random.common.discrete_broadcast_d
???
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
> ???
E ValueError: lam value too large
common.pyx:340: ValueError
----------------------------- Captured stdout call -----------------------------
ip.diffim.generateAlardLuptonBasisList INFO: PSF sigmas are not available or scaling by fwhm disabled, falling back to config values
TRACE1.ip.diffim.BasisLists.makeAlardLuptonBasisList DEBUG: Gaussian 0 : sigma 2.50 degree 2
_____________________ PsfMatchTestCases.testMatchExposures _____________________
[gw2] linux -- Python 3.7.3 /scratch/bvan/conda/envs/default/bin/python3.7
self = <test_imagePsfMatch.PsfMatchTestCases testMethod=testMatchExposures>
def testMatchExposures(self):
# Only test 1 option
> tMi, sMi, sK, kcs, confake = diffimTools.makeFakeKernelSet(bgValue=self.bgValue)
tests/test_imagePsfMatch.py:155:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
python/lsst/ip/diffim/diffimTools.py:238: in makeFakeKernelSet
sim = makePoissonNoiseImage(sim)
python/lsst/ip/diffim/diffimTools.py:88: in makePoissonNoiseImage
intNoiseArr = rand.poisson(imArr)
mtrand.pyx:3259: in numpy.random.mtrand.RandomState.poisson
???
common.pyx:794: in numpy.random.common.disc
???
common.pyx:601: in numpy.random.common.discrete_broadcast_d
???
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
> ???
E ValueError: lam value too large
common.pyx:340: ValueError
----------------------------- Captured stdout call -----------------------------
ip.diffim.generateAlardLuptonBasisList INFO: PSF sigmas are not available or scaling by fwhm disabled, falling back to config values
TRACE1.ip.diffim.BasisLists.makeAlardLuptonBasisList DEBUG: Gaussian 0 : sigma 2.50 degree 2
__________________________ PsfMatchTestCases.testSnap __________________________
[gw1] linux -- Python 3.7.3 /scratch/bvan/conda/envs/default/bin/python3.7
self = <test_snapPsfMatch.PsfMatchTestCases testMethod=testSnap>
def testSnap(self):
> tMi, sMi, sK, kcs, confake = diffimTools.makeFakeKernelSet(bgValue=self.bgValue)
tests/test_snapPsfMatch.py:100:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
python/lsst/ip/diffim/diffimTools.py:238: in makeFakeKernelSet
sim = makePoissonNoiseImage(sim)
python/lsst/ip/diffim/diffimTools.py:88: in makePoissonNoiseImage
intNoiseArr = rand.poisson(imArr)
mtrand.pyx:3259: in numpy.random.mtrand.RandomState.poisson
???
common.pyx:794: in numpy.random.common.disc
???
common.pyx:601: in numpy.random.common.discrete_broadcast_d
???
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
> ???
E ValueError: lam value too large
common.pyx:340: ValueError
----------------------------- Captured stdout call -----------------------------
ip.diffim.generateAlardLuptonBasisList INFO: PSF sigmas are not available or scaling by fwhm disabled, falling back to config values
TRACE1.ip.diffim.BasisLists.makeAlardLuptonBasisList DEBUG: Gaussian 0 : sigma 2.50 degree 2
=============================== warnings summary ===============================
/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/python/lsst/base/packages.py:31
/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/python/lsst/base/packages.py:31
/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/python/lsst/base/packages.py:31
/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/python/lsst/base/packages.py:31
/scratch/bvan/conda/envs/default/share/eups/Linux64/base/tickets.DM-20864-g6f30940fad+606ab73386/python/lsst/base/packages.py:31: DeprecationWarning: Using or importing the ABCs from 'collections' instead of from 'collections.abc' is deprecated, and in 3.8 it will stop working
from collections import Mapping
/scratch/bvan/conda/envs/default/lib/python3.7/site-packages/past/types/oldstr.py:5
/scratch/bvan/conda/envs/default/lib/python3.7/site-packages/past/types/oldstr.py:5
/scratch/bvan/conda/envs/default/lib/python3.7/site-packages/past/types/oldstr.py:5
/scratch/bvan/conda/envs/default/lib/python3.7/site-packages/past/types/oldstr.py:5
/scratch/bvan/conda/envs/default/lib/python3.7/site-packages/past/types/oldstr.py:5: DeprecationWarning: Using or importing the ABCs from 'collections' instead of from 'collections.abc' is deprecated, and in 3.8 it will stop working
from collections import Iterable
/scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219
/scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219
/scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219
/scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219
/scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219
/scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219
/scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219
/scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219
/scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219
/scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219
/scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219
/scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219
/scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219
/scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219
/scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219
/scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219
/scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219
/scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219
/scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219
/scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219
/scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219
/scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219
/scratch/bvan/conda/envs/default/lib/python3.7/importlib/_bootstrap.py:219: RuntimeWarning: numpy.ufunc size changed, may indicate binary incompatibility. Expected 192 from C header, got 216 from PyObject
return f(*args, **kwds)
/scratch/bvan/conda/envs/default/share/eups/Linux64/proxmin/tickets.DM-20864-gcf227cf51e+da39a3ee5e/lib/python/proxmin-0.5.5-py3.7.egg/proxmin/operators.py:121
/scratch/bvan/conda/envs/default/share/eups/Linux64/proxmin/tickets.DM-20864-gcf227cf51e+da39a3ee5e/lib/python/proxmin-0.5.5-py3.7.egg/proxmin/operators.py:121
/scratch/bvan/conda/envs/default/share/eups/Linux64/proxmin/tickets.DM-20864-gcf227cf51e+da39a3ee5e/lib/python/proxmin-0.5.5-py3.7.egg/proxmin/operators.py:121
/scratch/bvan/conda/envs/default/share/eups/Linux64/proxmin/tickets.DM-20864-gcf227cf51e+da39a3ee5e/lib/python/proxmin-0.5.5-py3.7.egg/proxmin/operators.py:121
/scratch/bvan/conda/envs/default/share/eups/Linux64/proxmin/tickets.DM-20864-gcf227cf51e+da39a3ee5e/lib/python/proxmin-0.5.5-py3.7.egg/proxmin/operators.py:121
/scratch/bvan/conda/envs/default/share/eups/Linux64/proxmin/tickets.DM-20864-gcf227cf51e+da39a3ee5e/lib/python/proxmin-0.5.5-py3.7.egg/proxmin/operators.py:121
/scratch/bvan/conda/envs/default/share/eups/Linux64/proxmin/tickets.DM-20864-gcf227cf51e+da39a3ee5e/lib/python/proxmin-0.5.5-py3.7.egg/proxmin/operators.py:121
/scratch/bvan/conda/envs/default/share/eups/Linux64/proxmin/tickets.DM-20864-gcf227cf51e+da39a3ee5e/lib/python/proxmin-0.5.5-py3.7.egg/proxmin/operators.py:121
/scratch/bvan/conda/envs/default/share/eups/Linux64/proxmin/tickets.DM-20864-gcf227cf51e+da39a3ee5e/lib/python/proxmin-0.5.5-py3.7.egg/proxmin/operators.py:121: DeprecationWarning: invalid escape sequence \s
/scratch/bvan/conda/envs/default/lib/python3.7/site-packages/lmfit/model.py:278
/scratch/bvan/conda/envs/default/lib/python3.7/site-packages/lmfit/model.py:278
/scratch/bvan/conda/envs/default/lib/python3.7/site-packages/lmfit/model.py:278
/scratch/bvan/conda/envs/default/lib/python3.7/site-packages/lmfit/model.py:278
/scratch/bvan/conda/envs/default/lib/python3.7/site-packages/lmfit/model.py:278
/scratch/bvan/conda/envs/default/lib/python3.7/site-packages/lmfit/model.py:278
/scratch/bvan/conda/envs/default/lib/python3.7/site-packages/lmfit/model.py:278
/scratch/bvan/conda/envs/default/lib/python3.7/site-packages/lmfit/model.py:278
/scratch/bvan/conda/envs/default/lib/python3.7/site-packages/lmfit/model.py:278
/scratch/bvan/conda/envs/default/lib/python3.7/site-packages/lmfit/model.py:278: FutureWarning: The keyword 'missing' is deprecated as of lmfit 0.9.13 and will be removed in the next release. Use 'nan_policy' instead.
"Use 'nan_policy' instead.", FutureWarning)
/scratch/bvan/conda/envs/default/lib/python3.7/site-packages/lmfit/minimizer.py:2105
/scratch/bvan/conda/envs/default/lib/python3.7/site-packages/lmfit/minimizer.py:2105
/scratch/bvan/conda/envs/default/lib/python3.7/site-packages/lmfit/minimizer.py:2105
/scratch/bvan/conda/envs/default/lib/python3.7/site-packages/lmfit/minimizer.py:2105
/scratch/bvan/conda/envs/default/lib/python3.7/site-packages/lmfit/minimizer.py:2105
/scratch/bvan/conda/envs/default/lib/python3.7/site-packages/lmfit/minimizer.py:2105
/scratch/bvan/conda/envs/default/lib/python3.7/site-packages/lmfit/minimizer.py:2105
/scratch/bvan/conda/envs/default/lib/python3.7/site-packages/lmfit/minimizer.py:2105
/scratch/bvan/conda/envs/default/lib/python3.7/site-packages/lmfit/minimizer.py:2105
/scratch/bvan/conda/envs/default/lib/python3.7/site-packages/lmfit/minimizer.py:2105: FutureWarning: The option 'drop' is deprecated as of lmfit 0.9.13 and will be removed in the next release. Use 'omit' instead.
"instead.", FutureWarning)
-- Docs: https://docs.pytest.org/en/latest/warnings.html
- generated xml file: /scratch/bvan/lsst/distrib/ip_diffim/tests/.tests/pytest-ip_diffim.xml -
----------- coverage: platform linux, python 3.7.3-final-0 -----------
Name Stmts Miss Branch BrPart Cover
-------------------------------------------------------------------------------------
python/lsst/__init__.py 3 0 0 0 100%
python/lsst/gdb/__init__.py 3 0 0 0 100%
python/lsst/gdb/ip/__init__.py 3 0 0 0 100%
python/lsst/gdb/ip/diffim/__init__.py 0 0 0 0 100%
python/lsst/ip/__init__.py 3 0 0 0 100%
python/lsst/ip/diffim/__init__.py 23 0 0 0 100%
python/lsst/ip/diffim/dcrModel.py 222 90 84 10 52%
python/lsst/ip/diffim/deprecated.py 19 2 8 1 89%
python/lsst/ip/diffim/detail/__init__.py 1 0 0 0 100%
python/lsst/ip/diffim/detail/diffimDetailLib.py 11 0 0 0 100%
python/lsst/ip/diffim/diaCatalogSourceSelector.py 93 24 44 11 72%
python/lsst/ip/diffim/diaSourceAnalysis.py 75 56 14 0 21%
python/lsst/ip/diffim/diffimLib.py 15 0 0 0 100%
python/lsst/ip/diffim/diffimTools.py 262 96 72 8 59%
python/lsst/ip/diffim/dipoleFitTask.py 435 190 132 25 53%
python/lsst/ip/diffim/dipoleMeasurement.py 168 45 46 6 66%
python/lsst/ip/diffim/getTemplate.py 103 80 32 0 17%
python/lsst/ip/diffim/imageDecorrelation.py 223 37 52 18 75%
python/lsst/ip/diffim/imageMapReduce.py 262 28 98 8 88%
python/lsst/ip/diffim/imagePsfMatch.py 266 74 80 28 67%
python/lsst/ip/diffim/kernelCandidateQa.py 169 153 50 0 7%
python/lsst/ip/diffim/makeKernelBasisList.py 107 14 47 11 84%
python/lsst/ip/diffim/metrics.py 45 0 10 0 100%
python/lsst/ip/diffim/modelPsfMatch.py 149 8 36 7 92%
python/lsst/ip/diffim/psfMatch.py 294 93 130 17 68%
python/lsst/ip/diffim/snapPsfMatch.py 30 1 0 0 97%
python/lsst/ip/diffim/utils.py 685 582 202 5 13%
python/lsst/ip/diffim/version.py 5 0 0 0 100%
python/lsst/ip/diffim/zogy.py 469 62 94 22 84%
tests/test_assessSpatialKernelVisitor.py 94 2 5 1 97%
tests/test_basisLists.py 166 12 18 1 93%
tests/test_buildSingleKernelVisitor.py 194 8 14 1 96%
tests/test_buildSpatialKernelVisitor.py 111 3 22 1 97%
tests/test_compareToHotpants.py 302 2 84 1 99%
tests/test_dcrModel.py 318 3 66 2 99%
tests/test_diaCatalogSourceSelector.py 79 2 10 2 96%
tests/test_dipole.py 271 20 28 10 90%
tests/test_dipoleFitter.py 111 19 12 4 81%
tests/test_findSetBits.py 49 2 2 1 94%
tests/test_imageDecorrelation.py 224 10 22 8 93%
tests/test_imageMapReduce.py 283 6 56 5 97%
tests/test_imagePsfMatch.py 166 87 14 1 49%
tests/test_imageStatistics.py 125 2 38 3 97%
tests/test_imageSubtract.py 75 4 14 3 92%
tests/test_ipDiffimConfig.py 41 2 2 1 93%
tests/test_kernelCandidateAndSolution.py 318 35 54 3 90%
tests/test_kernelCandidateDetection.py 76 4 12 3 92%
tests/test_kernelPca.py 168 2 30 1 98%
tests/test_kernelSumVisitor.py 100 3 20 1 97%
tests/test_metrics.py 104 2 4 1 97%
tests/test_modelPsfMatch.py 91 3 10 1 96%
tests/test_snapPsfMatch.py 84 32 2 1 62%
tests/test_subtractExposures.py 170 7 40 5 94%
tests/test_zogy.py 164 2 10 1 98%
-------------------------------------------------------------------------------------
TOTAL 8027 1909 1820 239 73%
Coverage HTML written to dir tests/.tests/pytest-ip_diffim.xml-htmlcov
Coverage XML written to file tests/.tests/pytest-ip_diffim.xml-cov-ip_diffim.xml
======== 10 failed, 237 passed, 1 skipped, 56 warnings in 42.90 seconds ========
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