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Last active February 29, 2024 14:37
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BiCGSTAB or BCGSTAB Pytorch implementation GPU support
import torch
import warnings
class BiCGSTAB():
"""
This is a pytorch implementation of BiCGSTAB or BCGSTAB, a stable version
of the CGD method, published first by Van Der Vrost.
For solving ``Ax = b`` system.
Example:
solver = BiCGSTAB(Ax_gen)
solver.solve(b, x=intial_x, tol=1e-10, atol=1e-16)
"""
def __init__(self, Ax_gen, device='cuda'):
"""
Ax_gen: A function that takes a 1-D tensor x and output Ax
Note: This structure is follwed as it may not be computationally
efficient to compute A explicitly.
"""
self.Ax_gen = Ax_gen
self.device = device
def init_params(self, b, x=None, nsteps=None, tol=1e-10, atol=1e-16):
"""
b: The R.H.S of the system. 1-D tensor
nsteps: Number of steps of calculation
tol: Tolerance such that if ||r||^2 < tol * ||b||^2 then converged
atol: Tolernace such that if ||r||^2 < atol then converged
"""
self.b = b.clone().detach()
self.x = torch.zeros(b.shape[0], device=self.device) if x is None else x
self.residual_tol = tol * torch.vdot(self.b, self.b).real
self.atol = torch.tensor(atol, device=self.device)
self.nsteps = b.shape[0] if nsteps is None else nsteps
self.status, self.r = self.check_convergence(self.x)
self.rho = torch.tensor(1, device=self.device)
self.alpha = torch.tensor(1, device=self.device)
self.omega = torch.tensor(1, device=self.device)
self.v = torch.zeros(b.shape[0], device=self.device)
self.p = torch.zeros(b.shape[0], device=self.device)
self.r_hat = self.r.clone().detach()
def check_convergence(self, x):
r = self.b - self.Ax_gen(x)
rdotr = torch.vdot(r,r).real
if rdotr < self.residual_tol or rdotr < self.atol:
return True, r
else:
return False, r
def step(self):
rho = torch.dot(self.r, self.r_hat) # rho_i <- <r0, r^>
beta = (rho/self.rho)*(self.alpha/self.omega) # beta <- (rho_i/rho_{i-1}) x (alpha/omega_{i-1})
self.rho = rho # rho_{i-1} <- rho_i replaced self value
self.p = self.r + beta*(self.p - self.omega*self.v) # p_i <- r_{i-1} + beta x (p_{i-1} - w_{i-1} v_{i-1}) replaced p self value
self.v = self.Ax_gen(self.p) # v_i <- Ap_i
self.alpha = self.rho/torch.dot(self.r_hat, self.v) # alpha <- rho_i/<r^, v_i>
s = self.r - self.alpha*self.v # s <- r_{i-1} - alpha v_i
t = self.Ax_gen(s) # t <- As
self.omega = torch.dot(t, s)/torch.dot(t, t) # w_i <- <t, s>/<t, t>
self.x = self.x + self.alpha*self.p + self.omega*s # x_i <- x_{i-1} + alpha p + w_i s
status, res = self.check_convergence(self.x)
if status:
return True
else:
self.r = s - self.omega*t # r_i <- s - w_i t
return False
def solve(self, *args, **kwargs):
"""
Method to find the solution.
Returns the final answer of x
"""
self.init_params(*args, **kwargs)
if self.status:
return self.x
while self.nsteps:
s = self.step()
if s:
return self.x
if self.rho == 0:
break
self.nsteps-=1
warnings.warn('Convergence has failed :(')
return self.x
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@tvercaut Thanks! Updated the gist.

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bridgesign commented Mar 7, 2023 via email

@nazaninj
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nazaninj commented Mar 7, 2023

Thanks for your reply. I try to solve a Ax=b systems. A shape is (4, 8). b .shape is (4,1). I started with x with shape of (8,1) but it crashes in solver part.
here: self.p = self.r + beta * ( self.p - self.omega * self.v).
beacuse size of x is 8 but size of p is 4.

error is:
Ax_gen = lambda x: torch.matmul(A, x)
RuntimeError: size mismatch, got 4, 4x8,4

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nazaninj commented Mar 7, 2023 via email

@bridgesign
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bridgesign commented Mar 7, 2023 via email

@tvercaut
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tvercaut commented Mar 8, 2023

If helpful, on my side, I eventualy decided to go for a different implementation as shown here:
https://github.com/cai4cai/torchsparsegradutils/blob/main/torchsparsegradutils/utils/bicgstab.py

@nazaninj
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nazaninj commented Mar 13, 2023 via email

@bridgesign
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bridgesign commented Mar 16, 2023 via email

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