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@btseytlin
Created June 23, 2021 13:35
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Medium "How to actually forecast COVID-19" embed
from sir_models.fitters import HiddenCurveFitter
from sir_models.models import SEIRHidden
stepwize_size = 60
weights = {
'I': 0.25,
'R': 0.25,
'D': 0.5,
}
model = SEIRHidden(stepwise_size=stepwize_size)
fitter = HiddenCurveFitter(
new_deaths_col='deaths_per_day_ma7',
new_cases_col='infected_per_day_ma7',
new_recoveries_col='recovered_per_day_ma7',
weights=weights,
max_iters=1000,
)
fitter.fit(model, train_subset)
result = fitter.result
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