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Ridge plot for plotting logistic regression data
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library(dplyr) | |
library(ggplot2) | |
library(ggridges) | |
dat <- select(psych::bfi, age, education, gender) %>% | |
mutate(education = as.factor(education), | |
gender = as.factor(gender), | |
gender_edu = paste(education, gender)) %>% | |
na.omit() | |
ggplot(dat, aes(x = age, | |
y = gender_edu, | |
group = gender_edu, | |
color = education, | |
fill = education | |
)) + | |
geom_density_ridges(aes(alpha = gender)) + | |
scale_alpha_discrete(range = c(.2, .6)) + | |
geom_point(alpha = .3) | |
ggplot(dat, aes(x = age, | |
y = gender_edu, | |
group = gender_edu, | |
color = education, | |
fill = education | |
)) + | |
geom_density_ridges(aes(alpha = gender), scale = 1) + # Change scale to adjust amount of density overlap | |
scale_alpha_discrete(range = c(.2, .6)) + | |
geom_jitter(width = 0, height = .2, alpha = .3) | |
mod <- glm(gender ~ age + education, family = "binomial", data = dat) | |
newdat <- bind_cols(dat, pred = predict(mod, type = "response")) | |
# Scatterplot using predicted probabilities and point shape | |
ggplot(newdat, aes(x = age, y = pred)) + | |
geom_point(aes(alpha = gender, color = education)) + | |
geom_point(aes(color = education), shape = 1) + | |
scale_alpha_discrete(range = c(0, 1)) |
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