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October 30, 2020 20:12
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ggplot example individual + group change plot
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library(tidyverse) | |
ind_data <- psych::bfi %>% | |
na.omit() %>% | |
filter(education %in% c(2, 4, 5)) %>% | |
select(A1:A5, education) %>% | |
group_by(education) %>% | |
slice(sample(1:n(), 40)) %>% | |
ungroup() %>% | |
rowid_to_column(".id") %>% | |
pivot_longer(A1:A5, names_to = "day", values_to = "score", names_pattern = "A(\\d)") %>% | |
mutate(education = factor(education, levels = c(2, 4, 5), labels = c("low", "med", "high"))) | |
grp_data <- ind_data %>% | |
group_by(education, day) %>% | |
summarize( | |
n = n(), | |
mean = mean(score), | |
sd = sd(score), | |
lower = mean - qt(.975, n - 1) * sd / sqrt(n), | |
upper = mean + qt(.975, n - 1) * sd / sqrt(n) | |
) %>% | |
ungroup() | |
ind_data %>% | |
ggplot() + | |
theme_classic() + | |
# common aesthetics for all geoms | |
aes(x = day, | |
fill = education) + | |
# individual data lines | |
geom_line(aes(y = score, color = education, group = .id), alpha = .3, | |
position = position_jitter(width = 0)) + # remove position and width for the exact values | |
# group summary CI bands | |
geom_ribbon( | |
aes(y = mean, ymin = lower, ymax = upper, group = education), | |
data = grp_data, | |
alpha = .2, | |
size = 0 | |
) + | |
# Group summary means | |
geom_line(aes(y = mean, color = education, group = education), data = grp_data, size = 1) + | |
geom_point(aes(y = mean, color = education, group = education), data = grp_data, size = 2) | |
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