Created
April 5, 2019 18:58
-
-
Save camilajenny/bac8a4accd9782e81ef762fb60adadb3 to your computer and use it in GitHub Desktop.
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
class Docking: | |
""" | |
Implementacje: | |
* oddt.docking.autodock_vina | |
* custom engine } | |
* oddt.docking.rdock } nowe klasy | |
""" | |
def set_protein(self, protein): pass | |
def set_writer(self, writer): # writer of type MolWriter | |
pass | |
def score(self, ligands): pass | |
def dock(self, ligands): pass | |
def clean(self): pass | |
def predict_ligand(self, ligand): pass | |
def predict_ligands(self, ligands): pass | |
def write(self, mol, directory, flexible=True, name_id=None): pass | |
class MolWriter: | |
""" | |
Implementacje: | |
* rdkit.Chem.rdmolfiles.PDBWriter | |
* rdkit.Chem.rdmolfiles.SDWriter | |
* rdkit.Chem.rdmolfiles.SmilesWriter | |
* nowa klasa oddt.Docking.PDBQTWriter | |
""" | |
def write(self, mol, id): pass |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment