Conversion of gene to frame

gen_sample.py

series = []
d = {}
for row in raw:
    try:
        if len(row) == 0:
            continue
        if row.startswith("!sample_table_end"):
            for k in arr:
                if k in d:
                    d[k] = [d[k]]
            series.append(d)
            d = {}
            continue
        if row.startswith("#") or row.startswith("ID_REF") or ("sample_table_begin" in row):
           continue
        if row.startswith("^") or row.startswith("!"):
            x = row.split(" ")
            a,b = x[0].strip(), " ".join(x[1:]).strip()
            if a in arr:
                if a not in d:
                    d[a] = []
                else:
                    d[a] = d[a] + [b[2:]]
            else:
                d[a] = [b[2:]]
        else:
            a,b = row.split("\t")
            d[a.strip()] = [b.strip()]
    except Exception as e:
        print(row, e)
        break