I hereby claim:
- I am caryan on github.
- I am caryan (https://keybase.io/caryan) on keybase.
- I have a public key whose fingerprint is 437A E338 3B0B DB58 2F86 1E08 DE63 FA60 3D8F 1124
To claim this, I am signing this object:
{ | |
"cells": [ | |
{ | |
"cell_type": "markdown", | |
"metadata": {}, | |
"source": [ | |
"# Introduction\n", | |
"\n", | |
"I had to figure out stochastic differntial equations to simulate thermal fluctuation in the switching of MRAM elements at low temperature. Here are some simple notes and examples for reference when I need to figure out what I've done. " | |
] |
using Glob | |
using DataFrames | |
const PICARD = "/home/cryan/Downloads/picard-tools-2.1.0/picard.jar" | |
const GATK = "/home/cryan/Downloads/GATK/GenomeAnalysisTK.jar" | |
function prepare_reference(ref) | |
#index the reference for bwa | |
run(`bwa index $ref.fasta`) | |
#sort the reference TODO: does it need to be sorted? .fai file seems minimal |
I hereby claim:
To claim this, I am signing this object:
import hashlib | |
import html | |
import json | |
import sys | |
from typing import Optional | |
from pylint.reporters import JSONReporter | |
from pylint.lint import Run | |
# map pylint categories to CodeClimate severity |