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Created April 3, 2013 20:47
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R failed to build on 10.8.3 (tried both with and without env=std)
HOMEBREW_VERSION: 0.9.4
ORIGIN: https://github.com/mxcl/homebrew.git
HEAD: 3730c0636fa344ad1e49697c3c5a8b867c62353a
HOMEBREW_PREFIX: /usr/local
HOMEBREW_CELLAR: /usr/local/Cellar
CPU: quad-core 64-bit sandybridge
OS X: 10.8.3-x86_64
Xcode: 4.6.1
CLT: 4.6.0.0.1.1362189000
GCC-4.2: build 5666
LLVM-GCC: build 2336
Clang: 4.2 build 425
X11: 2.7.4 => /opt/X11
System Ruby: 1.8.7-358
Perl: /usr/bin/perl
Python: /usr/local/bin/python => /usr/local/Cellar/python/2.7.3/Frameworks/Python.framework/Versions/2.7/bin/python2.7
Ruby: /usr/local/bin/ruby => /usr/local/Cellar/ruby/2.0.0-p0/bin/ruby
Error: Failed to import: openblas64
Your system is raring to brew.
HOMEBREW_MAKE_JOBS=1 VERBOSE=1 brew install r
==> Downloading http://cran.r-project.org/src/base/R-2/R-2.15.3.tar.gz
Already downloaded: /Library/Caches/Homebrew/r-2.15.3.tar.gz
tar xf /Library/Caches/Homebrew/r-2.15.3.tar.gz
==> Using Homebrew-provided fortran compiler.
This may be changed by setting the FC environment variable.
==> ./configure --prefix=/usr/local/Cellar/r/2.15.3 --with-aqua --enable-R-framework --with-lapack
./configure --prefix=/usr/local/Cellar/r/2.15.3 --with-aqua --enable-R-framework --with-lapack
checking build system type... x86_64-apple-darwin12.3.0
checking host system type... x86_64-apple-darwin12.3.0
loading site script './config.site'
loading build-specific script './config.site'
checking for pwd... /bin/pwd
checking whether builddir is srcdir... yes
checking for working aclocal... found
checking for working autoconf... found
checking for working automake... found
checking for working autoheader... found
checking for gawk... gawk
checking whether ln -s works... yes
checking for bison... bison -y
checking for ar... ar
checking for a BSD-compatible install... /usr/bin/install -c
checking for sed... /usr/local/Library/ENV/4.3/sed
checking for which... /usr/bin/which
checking for less... /usr/bin/less
checking for gtar... no
checking for gnutar... /usr/bin/gnutar
checking for tex... no
checking for pdftex... no
configure: WARNING: you cannot build PDF versions of the R manuals
checking for pdflatex... no
configure: WARNING: you cannot build PDF versions of vignettes and help pages
checking for makeindex... no
checking for makeinfo... /usr/bin/makeinfo
checking whether makeinfo version is at least 4.7... yes
checking for ginstall-info... no
checking for install-info... /usr/bin/install-info
checking for texi2dvi... /usr/bin/texi2dvi
checking for kpsewhich... no
checking for unzip... /usr/bin/unzip
checking for zip... /usr/bin/zip
checking for gzip... /usr/bin/gzip
checking for bzip2... /usr/bin/bzip2
checking for firefox... no
checking for mozilla... no
checking for galeon... no
checking for opera... no
checking for xdg-open... no
checking for kfmclient... no
checking for gnome-moz-remote... no
checking for open... /usr/bin/open
using default browser ... /usr/bin/open
checking for acroread... no
checking for acroread4... no
checking for xdg-open... no
checking for evince... no
checking for xpdf... no
checking for gv... no
checking for gnome-gv... no
checking for ggv... no
checking for okular... no
checking for kpdf... no
checking for open... /usr/bin/open
checking for notangle... false
checking for pkg-config... /usr/local/bin/pkg-config
checking for gcc... cc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether cc accepts -g... yes
checking for cc option to accept ISO C89... none needed
checking how to run the C preprocessor... cc -E
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking whether cc needs -traditional... no
checking how to run the C preprocessor... cc -E
defining F77 to be /usr/bin/gfortran
checking whether we are using the GNU Fortran 77 compiler... yes
checking whether /usr/bin/gfortran accepts -g... yes
checking whether we are using the GNU C++ compiler... yes
checking whether c++ accepts -g... yes
checking how to run the C++ preprocessor... c++ -E
checking whether __attribute__((visibility())) is supported... no
checking whether cc accepts -fvisibility... yes
checking whether /usr/bin/gfortran accepts -fvisibility... yes
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking minix/config.h usability... no
checking minix/config.h presence... no
checking for minix/config.h... no
checking whether it is safe to define __EXTENSIONS__... yes
checking whether we are using the GNU Objective C compiler... yes
checking whether cc accepts -g... yes
checking for Objective C++ compiler... trying some possibilities
checking whether c++ can compile ObjC++... yes
c++
checking for a sed that does not truncate output... (cached) /usr/local/Library/ENV/4.3/sed
checking for fgrep... /usr/bin/grep -F
checking for ld used by cc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... no
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm
checking the name lister (/usr/bin/nm) interface... BSD nm
checking the maximum length of command line arguments... 196608
checking whether the shell understands some XSI constructs... yes
checking whether the shell understands "+="... yes
checking for /usr/bin/ld option to reload object files... -r
checking for objdump... no
checking how to recognize dependent libraries... pass_all
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm output from cc object... ok
checking for dsymutil... dsymutil
checking for nmedit... nmedit
checking for lipo... lipo
checking for otool... otool
checking for otool64... no
checking for -single_module linker flag... yes
checking for -exported_symbols_list linker flag... yes
checking for dlfcn.h... yes
checking whether we are using the GNU C++ compiler... (cached) yes
checking whether c++ accepts -g... (cached) yes
checking how to run the C++ preprocessor... c++ -E
checking whether we are using the GNU Fortran 77 compiler... (cached) yes
checking whether /usr/bin/gfortran accepts -g... (cached) yes
checking for objdir... .libs
checking if cc supports -fno-rtti -fno-exceptions... yes
checking for cc option to produce PIC... -fno-common -DPIC
checking if cc PIC flag -fno-common -DPIC works... yes
checking if cc static flag -static works... no
checking if cc supports -c -o file.o... yes
checking if cc supports -c -o file.o... (cached) yes
checking whether the cc linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... darwin12.3.0 dyld
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for ld used by c++... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... no
checking whether the c++ linker (/usr/bin/ld) supports shared libraries... yes
checking for c++ option to produce PIC... -fno-common -DPIC
checking if c++ PIC flag -fno-common -DPIC works... yes
checking if c++ static flag -static works... no
checking if c++ supports -c -o file.o... yes
checking if c++ supports -c -o file.o... (cached) yes
checking whether the c++ linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... darwin12.3.0 dyld
checking how to hardcode library paths into programs... immediate
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for /usr/bin/gfortran option to produce PIC... -fno-common
checking if /usr/bin/gfortran PIC flag -fno-common works... yes
checking if /usr/bin/gfortran static flag -static works... no
checking if /usr/bin/gfortran supports -c -o file.o... yes
checking if /usr/bin/gfortran supports -c -o file.o... (cached) yes
checking whether the /usr/bin/gfortran linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... darwin12.3.0 dyld
checking how to hardcode library paths into programs... immediate
checking for sin in -lm... yes
checking for library containing dlopen... none required
checking readline/history.h usability... yes
checking readline/history.h presence... yes
checking for readline/history.h... yes
checking readline/readline.h usability... yes
checking readline/readline.h presence... yes
checking for readline/readline.h... yes
checking for rl_callback_read_char in -lreadline... yes
checking for history_truncate_file... yes
checking whether rl_completion_matches exists and is declared... yes
checking for ANSI C header files... (cached) yes
checking for dirent.h that defines DIR... yes
checking for library containing opendir... none required
checking for sys/wait.h that is POSIX.1 compatible... yes
checking arpa/inet.h usability... yes
checking arpa/inet.h presence... yes
checking for arpa/inet.h... yes
checking dl.h usability... no
checking dl.h presence... no
checking for dl.h... no
checking for dlfcn.h... (cached) yes
checking elf.h usability... no
checking elf.h presence... no
checking for elf.h... no
checking fcntl.h usability... yes
checking fcntl.h presence... yes
checking for fcntl.h... yes
checking floatingpoint.h usability... no
checking floatingpoint.h presence... no
checking for floatingpoint.h... no
checking fpu_control.h usability... no
checking fpu_control.h presence... no
checking for fpu_control.h... no
checking glob.h usability... yes
checking glob.h presence... yes
checking for glob.h... yes
checking grp.h usability... yes
checking grp.h presence... yes
checking for grp.h... yes
checking netdb.h usability... yes
checking netdb.h presence... yes
checking for netdb.h... yes
checking netinet/in.h usability... yes
checking netinet/in.h presence... yes
checking for netinet/in.h... yes
checking pwd.h usability... yes
checking pwd.h presence... yes
checking for pwd.h... yes
checking for strings.h... (cached) yes
checking sys/param.h usability... yes
checking sys/param.h presence... yes
checking for sys/param.h... yes
checking sys/resource.h usability... yes
checking sys/resource.h presence... yes
checking for sys/resource.h... yes
checking sys/select.h usability... yes
checking sys/select.h presence... yes
checking for sys/select.h... yes
checking sys/socket.h usability... yes
checking sys/socket.h presence... yes
checking for sys/socket.h... yes
checking for sys/stat.h... (cached) yes
checking sys/time.h usability... yes
checking sys/time.h presence... yes
checking for sys/time.h... yes
checking sys/times.h usability... yes
checking sys/times.h presence... yes
checking for sys/times.h... yes
checking sys/utsname.h usability... yes
checking sys/utsname.h presence... yes
checking for sys/utsname.h... yes
checking for unistd.h... (cached) yes
checking utime.h usability... yes
checking utime.h presence... yes
checking for utime.h... yes
checking errno.h usability... yes
checking errno.h presence... yes
checking for errno.h... yes
checking for inttypes.h... (cached) yes
checking limits.h usability... yes
checking limits.h presence... yes
checking for limits.h... yes
checking locale.h usability... yes
checking locale.h presence... yes
checking for locale.h... yes
checking stdarg.h usability... yes
checking stdarg.h presence... yes
checking for stdarg.h... yes
checking stdbool.h usability... yes
checking stdbool.h presence... yes
checking for stdbool.h... yes
checking for stdint.h... (cached) yes
checking for string.h... (cached) yes
checking whether setjmp.h is POSIX.1 compatible... yes
checking whether sigsetjmp is declared... yes
checking whether siglongjmp is declared... yes
checking for GNU C library with version >= 2... no
checking return type of signal handlers... void
checking for uint64_t... yes
checking for pid_t... yes
checking for size_t... yes
checking whether SIZE_MAX is declared... yes
checking for blkcnt_t... yes
checking for type of socket length... socklen_t *
checking for stack_t... yes
checking for intptr_t... yes
checking for uintptr_t... yes
checking whether byte ordering is bigendian... no
checking for an ANSI C-conforming const... yes
checking for cc option to accept ISO C99... none needed
checking for cc option to accept ISO Standard C... (cached) none needed
checking for inline... inline
checking size of int... 4
checking size of long... 8
checking size of long long... 8
checking size of double... 8
checking size of long double... 16
checking size of size_t... 8
checking whether we can compute C Make dependencies... yes, using cc -MM
checking whether cc supports -c -o FILE.lo... yes
checking for cc option to support OpenMP... unsupported
checking how to get verbose linking output from /usr/bin/gfortran... -v
checking for Fortran 77 libraries of /usr/bin/gfortran... -L/usr/local/lib -L/usr/lib/gcc/i686-apple-darwin11/4.2.1/x86_64 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1/../../.. -lgfortranbegin -lgfortran
checking how to get verbose linking output from cc... -v
checking for C libraries of cc... -L/usr/local/lib -L/usr/local/opt/readline/lib -L/opt/X11/lib -lSystem /usr/bin/../lib/clang/4.2/lib/darwin/libclang_rt.osx.a
checking for dummy main to link with Fortran 77 libraries... none
checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore
checking whether /usr/bin/gfortran appends underscores to external names... yes
checking whether /usr/bin/gfortran appends extra underscores to external names... no
checking whether mixed C/Fortran code can be run... yes
checking whether /usr/bin/gfortran and cc agree on int and double... yes
checking whether /usr/bin/gfortran and cc agree on double complex... yes
checking for /usr/bin/gfortran option to support OpenMP... -fopenmp
checking whether c++ accepts -M for generating dependencies... yes
checking for c++ option to support OpenMP... unsupported
checking whether we can compute ObjC Make dependencies... yes, using cc -MM
checking for ObjC runtime library... -lobjc
checking for ObjC runtime style... next
checking whether cc accepts -fobjc-exceptions... yes
checking for cached Foundation settings... no
checking whether default Foundation framework works... no
checking whether -framework Foundation works... yes
checking for working Foundation implementation... yes
checking whether C runtime needs -D__NO_MATH_INLINES... no
checking for xmkmf... no
checking whether linker supports dynamic lookup... yes
checking for off_t... yes
checking for working alloca.h... yes
checking for alloca... yes
checking whether alloca is declared... yes
checking whether expm1 exists and is declared... yes
checking whether hypot exists and is declared... yes
checking whether log1p exists and is declared... yes
checking whether log2 exists and is declared... yes
checking whether log10 exists and is declared... yes
checking whether nearbyint exists and is declared... yes
checking whether nearbyintl exists and is declared... yes
checking whether powl exists and is declared... yes
checking whether rint exists and is declared... yes
checking whether rintl exists and is declared... yes
checking whether va_copy exists and is declared... yes
checking for isblank... yes
checking for fseeko... yes
checking for ftello... yes
checking for matherr... yes
checking whether fcntl exists and is declared... yes
checking whether getgrgid exists and is declared... yes
checking whether getpwuid exists and is declared... yes
checking whether kill exists and is declared... yes
checking whether sigaction exists and is declared... yes
checking whether sigaltstack exists and is declared... yes
checking whether sigemptyset exists and is declared... yes
checking whether fdopen exists and is declared... yes
checking whether popen exists and is declared... yes
checking whether setenv exists and is declared... yes
checking whether unsetenv exists and is declared... yes
checking whether getrlimit exists and is declared... yes
checking whether getrusage exists and is declared... yes
checking whether getpriority exists and is declared... yes
checking whether chmod exists and is declared... yes
checking whether mkfifo exists and is declared... yes
checking whether stat exists and is declared... yes
checking whether umask exists and is declared... yes
checking whether gettimeofday exists and is declared... yes
checking whether utimes exists and is declared... yes
checking whether times exists and is declared... yes
checking whether access exists and is declared... yes
checking whether chdir exists and is declared... yes
checking whether execv exists and is declared... yes
checking whether ftruncate exists and is declared... yes
checking whether getcwd exists and is declared... yes
checking whether geteuid exists and is declared... yes
checking whether getuid exists and is declared... yes
checking whether link exists and is declared... yes
checking whether readlink exists and is declared... yes
checking whether symlink exists and is declared... yes
checking whether sysconf exists and is declared... yes
checking whether utime exists and is declared... yes
checking whether clock_gettime exists and is declared... no
checking whether timespec_get exists and is declared... no
checking for putenv... yes
checking whether putenv is declared... yes
checking for vasprintf... yes
checking whether vasprintf is declared... yes
checking for mempcpy... no
checking for realpath... yes
checking whether realpath is declared... yes
checking whether glob exists and is declared... yes
checking for isnan... yes
checking whether isfinite is declared... yes
checking whether isnan is declared... yes
checking whether you have IEEE 754 floating-point arithmetic... yes
checking whether putenv("FOO") can unset an environment variable... no
checking whether putenv("FOO=") can unset an environment variable... no
checking for nl_langinfo and CODESET... yes
checking for mkdtemp... yes
checking for strdup... yes
checking for strncasecmp... yes
checking whether mkdtemp is declared... yes
checking whether strdup is declared... yes
checking whether strncasecmp is declared... yes
checking for library containing connect... none required
checking for library containing gethostbyname... none required
checking for library containing xdr_string... none required
checking for __setfpucw... no
checking for working calloc... yes
checking for working isfinite... yes
checking for working log1p... yes
checking whether ftell works correctly on files opened for append... yes
checking for working sigaction... yes
checking whether mktime sets errno... no
checking complex.h usability... yes
checking complex.h presence... yes
checking for complex.h... yes
checking for double complex... yes
checking whether C99 double complex is supported... yes
checking whether cabs exists and is declared... yes
checking whether carg exists and is declared... yes
checking whether cexp exists and is declared... yes
checking whether clog exists and is declared... yes
checking whether csqrt exists and is declared... yes
checking whether cpow exists and is declared... yes
checking whether ccos exists and is declared... yes
checking whether csin exists and is declared... yes
checking whether ctan exists and is declared... yes
checking whether cacos exists and is declared... yes
checking whether casin exists and is declared... yes
checking whether catan exists and is declared... yes
checking whether ccosh exists and is declared... yes
checking whether csinh exists and is declared... yes
checking whether ctanh exists and is declared... yes
checking for cblas_cdotu_sub in vecLib framework... -framework vecLib
checking iconv.h usability... yes
checking iconv.h presence... yes
checking for iconv.h... yes
checking for iconv... in libiconv
checking whether iconv accepts "UTF-8", "latin1", "ASCII" and "UCS-*"... yes
checking for iconvlist... yes
checking for iconv... yes
checking for iconv declaration...
extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft);
checking wchar.h usability... yes
checking wchar.h presence... yes
checking for wchar.h... yes
checking wctype.h usability... yes
checking wctype.h presence... yes
checking for wctype.h... yes
checking whether mbrtowc exists and is declared... yes
checking whether wcrtomb exists and is declared... yes
checking whether wcscoll exists and is declared... yes
checking whether wcsftime exists and is declared... yes
checking whether wcstod exists and is declared... yes
checking whether mbstowcs exists and is declared... yes
checking whether wcstombs exists and is declared... yes
checking whether wctrans exists and is declared... yes
checking whether iswblank exists and is declared... yes
checking whether wctype exists and is declared... yes
checking whether iswctype exists and is declared... yes
checking for wctrans_t... yes
checking for mbstate_t... yes
checking for ICU... no
checking for ucol_open in -licucore... yes
checking for X... libraries , headers
checking for gethostbyname... yes
checking for connect... yes
checking for remove... yes
checking for shmat... yes
checking for IceConnectionNumber in -lICE... yes
checking X11/Intrinsic.h usability... yes
checking X11/Intrinsic.h presence... yes
checking for X11/Intrinsic.h... yes
checking for XtToolkitInitialize in -lXt... yes
using X11 ... yes
checking for KeySym... yes
checking X11/Xmu/Atoms.h usability... yes
checking X11/Xmu/Atoms.h presence... yes
checking for X11/Xmu/Atoms.h... yes
checking for XmuInternAtom in -lXmu... yes
checking whether pkg-config knows about cairo and pango... no
checking whether pkg-config knows about cairo... yes
checking whether cairo is >= 1.2 and works... yes
checking for CFStringGetSystemEncoding in CoreFoundation framework... -framework CoreFoundation
checking for tclConfig.sh... no
checking for tclConfig.sh in library (sub)directories... /usr/lib/tclConfig.sh
checking for tkConfig.sh... no
checking for tkConfig.sh in library (sub)directories... /usr/lib/tkConfig.sh
checking tcl.h usability... yes
checking tcl.h presence... yes
checking for tcl.h... yes
checking tk.h usability... yes
checking tk.h presence... yes
checking for tk.h... yes
checking whether compiling/linking Tcl/Tk code works... yes
checking for BSD networking... yes
checking if jpeglib version >= 6b... yes
checking for jpeg_destroy_compress in -ljpeg... yes
checking for main in -lz... yes
checking if libpng version >= 1.2.7... yes
checking for png_create_write_struct in -lpng... yes
checking tiffio.h usability... yes
checking tiffio.h presence... yes
checking for tiffio.h... yes
checking for TIFFOpen in -ltiff... yes
checking rpc/types.h usability... yes
checking rpc/types.h presence... yes
checking for rpc/types.h... yes
checking for rpc/xdr.h... yes
checking for XDR support... yes
checking whether zlib support needs to be compiled... yes
checking mmap support for zlib... yes
checking whether bzip2 support needs to be compiled... yes
checking for lzma_version_number in -llzma... yes
checking lzma.h usability... yes
checking lzma.h presence... yes
checking for lzma.h... yes
checking if lzma version >= 4.999... yes
checking whether PCRE support needs to be compiled... yes
checking whether leap seconds are treated according to POSIX... yes
checking for inline... inline
checking for sys/time.h... (cached) yes
checking for stdlib.h... (cached) yes
checking for unistd.h... (cached) yes
checking for sys/param.h... (cached) yes
checking for struct stat.st_atim.tv_nsec... no
checking for struct stat.st_atimespec.tv_nsec... yes
checking for setitimer... yes
checking for special C compiler options needed for large files... no
checking for _FILE_OFFSET_BITS value needed for large files... no
checking for _LARGEFILE_SOURCE value needed for large files... no
checking whether KERN_USRSTACK sysctl is supported... yes
checking for lpr... lpr
checking for paperconf... false
checking for java... /usr/bin/java
checking for javac... /usr/bin/javac
checking for javah... /usr/bin/javah
checking for jar... /usr/bin/jar
checking whether Java compiler works... yes
checking whether Java interpreter works... yes
checking Java environment... /System/Library/Java/JavaVirtualMachines/1.6.0.jdk/Contents/Home
checking for cached Java settings... no
checking whether JNI programs can be compiled... yes
checking whether we are using the GNU Fortran compiler... yes
checking whether /usr/bin/gfortran accepts -g... yes
checking whether we are using the GNU Fortran compiler... (cached) yes
checking whether /usr/bin/gfortran accepts -g... (cached) yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for /usr/bin/gfortran option to produce PIC... -fno-common
checking if /usr/bin/gfortran PIC flag -fno-common works... yes
checking if /usr/bin/gfortran static flag -static works... no
checking if /usr/bin/gfortran supports -c -o file.o... yes
checking if /usr/bin/gfortran supports -c -o file.o... (cached) yes
checking whether the /usr/bin/gfortran linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... darwin12.3.0 dyld
checking how to hardcode library paths into programs... immediate
checking for Fortran flag to compile .f90 files... none
checking for Fortran flag to compile .f95 files... none
checking for /usr/bin/gfortran option to support OpenMP... -fopenmp
checking for recommended packages... yes
checking whether NLS is requested... yes
Configuring src/extra/intl directory
checking whether make sets $(MAKE)... yes
checking for a thread-safe mkdir -p... /usr/local/bin/gmkdir -p
checking for msgfmt... no
checking for gmsgfmt... :
checking for xgettext... no
checking for msgmerge... no
checking whether we are using the GNU C Library 2 or newer... no
checking for ranlib... (cached) ranlib
checking for simple visibility declarations... yes
checking for stdint.h... yes
checking for getpagesize... yes
checking for working mmap... yes
checking whether integer division by zero raises SIGFPE... yes
checking for inttypes.h... yes
checking for unsigned long long int... yes
checking for inttypes.h... (cached) yes
checking whether the inttypes.h PRIxNN macros are broken... no
checking whether imported symbols can be declared weak... no
checking for multithread API to use... none
checking argz.h usability... no
checking argz.h presence... no
checking for argz.h... no
checking for inttypes.h... (cached) yes
checking for limits.h... (cached) yes
checking for unistd.h... (cached) yes
checking for sys/param.h... (cached) yes
checking for getcwd... yes
checking for getegid... yes
checking for geteuid... yes
checking for getgid... yes
checking for getuid... yes
checking for mempcpy... (cached) no
checking for munmap... yes
checking for stpcpy... yes
checking for strcasecmp... yes
checking for strdup... (cached) yes
checking for strtoul... yes
checking for tsearch... yes
checking for argz_count... no
checking for argz_stringify... no
checking for argz_next... no
checking for __fsetlocking... no
checking whether feof_unlocked is declared... yes
checking whether fgets_unlocked is declared... no
checking for iconv... (cached) yes
checking for iconv declaration... (cached)
extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft);
checking for NL_LOCALE_NAME macro... no
checking for bison... bison
checking version of bison... 2.3, ok
checking for long long int... yes
checking for long double... yes
checking for wchar_t... yes
checking for wint_t... yes
checking for intmax_t... yes
checking whether printf() supports POSIX/XSI format strings... yes
checking whether we are using the GNU C Library 2.1 or newer... no
checking for stdint.h... (cached) yes
checking for SIZE_MAX... yes
checking for stdint.h... (cached) yes
checking for CFPreferencesCopyAppValue... yes
checking for CFLocaleCopyCurrent... yes
checking for ptrdiff_t... yes
checking stddef.h usability... yes
checking stddef.h presence... yes
checking for stddef.h... yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking for asprintf... yes
checking for fwprintf... yes
checking for putenv... (cached) yes
checking for setenv... yes
checking for setlocale... yes
checking for snprintf... yes
checking for wcslen... yes
checking whether _snprintf is declared... no
checking whether _snwprintf is declared... no
checking whether getc_unlocked is declared... yes
checking for nl_langinfo and CODESET... (cached) yes
checking for LC_MESSAGES... yes
checking for shared library run path origin... done
checking for CFPreferencesCopyAppValue... (cached) yes
checking for CFLocaleCopyCurrent... (cached) yes
checking whether included gettext is requested... no
checking for GNU gettext in libc... no
checking for GNU gettext in libintl... no
checking whether to use NLS... yes
checking where the gettext function comes from... included intl directory
Finished configuring src/extra/intl directory
using as R_SHELL for scripts ... /bin/sh
configure: creating ./config.status
config.status: creating Makeconf
config.status: creating Makefile
config.status: creating doc/Makefile
config.status: creating doc/html/Makefile
config.status: creating doc/manual/Makefile
config.status: creating etc/Makefile
config.status: creating etc/Makeconf
config.status: creating etc/Renviron
config.status: creating etc/ldpaths
config.status: creating m4/Makefile
config.status: creating po/Makefile.in
config.status: creating share/Makefile
config.status: creating src/Makefile
config.status: creating src/appl/Makefile
config.status: creating src/extra/Makefile
config.status: creating src/extra/blas/Makefile
config.status: creating src/extra/bzip2/Makefile
config.status: creating src/extra/intl/Makefile
config.status: creating src/extra/pcre/Makefile
config.status: creating src/extra/tre/Makefile
config.status: creating src/extra/xdr/Makefile
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config.status: creating src/extra/zlib/Makefile
config.status: creating src/include/Makefile
config.status: creating src/include/Rmath.h0
config.status: creating src/include/R_ext/Makefile
config.status: creating src/library/Recommended/Makefile
config.status: creating src/library/Makefile
config.status: creating src/library/base/DESCRIPTION
config.status: creating src/library/base/Makefile
config.status: creating src/library/compiler/DESCRIPTION
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config.status: creating src/library/datasets/DESCRIPTION
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config.status: executing libtool commands
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config.status: executing stamp-h commands
R is now configured for x86_64-apple-darwin12.3.0
Source directory: .
Installation directory: /usr/local/Cellar/r/2.15.3
C compiler: cc -g -O2
Fortran 77 compiler: /usr/bin/gfortran
C++ compiler: c++ -g -O2
Fortran 90/95 compiler: /usr/bin/gfortran
Obj-C compiler: cc -g -O2 -fobjc-exceptions
Interfaces supported: X11, aqua, tcltk
External libraries: readline, ICU, lzma
Additional capabilities: PNG, JPEG, TIFF, NLS, cairo
Options enabled: framework, shared BLAS, R profiling, Java
Recommended packages: yes
configure: WARNING: you cannot build PDF versions of the R manuals
configure: WARNING: you cannot build PDF versions of vignettes and help pages
==> make
make
make[1]: Nothing to be done for `R'.
make[1]: Nothing to be done for `R'.
make[2]: Nothing to be done for `R'.
creating src/scripts/R.fe
mkdir ../../bin
mkdir ../../include
mkdir ../../../include/R_ext
/usr/bin/gfortran -fPIC -c blas.f -o blas.o
/usr/bin/gfortran -fPIC -c cmplxblas.f -o cmplxblas.o
cc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o libRblas.dylib blas.o cmplxblas.o -install_name libRblas.dylib -headerpad_max_install_names -L/usr/lib/gcc/i686-apple-darwin11/4.2.1/x86_64 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1 -L/usr/lib -lgfortran # xerbla.o
brew: superenv removed: -L/usr/local/lib
mkdir /private/tmp/r-d7n2/R-2.15.3/lib
making blocksort.d from blocksort.c
brew: superenv removed: -I/usr/local/include
making bzlib.d from bzlib.c
brew: superenv removed: -I/usr/local/include
making bzcompress.d from bzcompress.c
brew: superenv removed: -I/usr/local/include
making crctable.d from crctable.c
brew: superenv removed: -I/usr/local/include
making decompress.d from decompress.c
brew: superenv removed: -I/usr/local/include
making huffman.d from huffman.c
brew: superenv removed: -I/usr/local/include
making randtable.d from randtable.c
brew: superenv removed: -I/usr/local/include
make[4]: `Makedeps' is up to date.
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c blocksort.c -o blocksort.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c bzlib.c -o bzlib.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c bzcompress.c -o bzcompress.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c crctable.c -o crctable.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c decompress.c -o decompress.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c huffman.c -o huffman.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c randtable.c -o randtable.o
brew: superenv removed: -I/usr/local/include -g -O2
rm -f libbz2.a
ar cr libbz2.a blocksort.o bzlib.o bzcompress.o crctable.o decompress.o huffman.o randtable.o
ranlib libbz2.a
making pcre_chartables.d from pcre_chartables.c
brew: superenv removed: -I/usr/local/include
making pcre_compile.d from pcre_compile.c
brew: superenv removed: -I/usr/local/include
making pcre_config.d from pcre_config.c
brew: superenv removed: -I/usr/local/include
making pcre_exec.d from pcre_exec.c
brew: superenv removed: -I/usr/local/include
making pcre_fullinfo.d from pcre_fullinfo.c
brew: superenv removed: -I/usr/local/include
making pcre_get.d from pcre_get.c
brew: superenv removed: -I/usr/local/include
making pcre_globals.d from pcre_globals.c
brew: superenv removed: -I/usr/local/include
making pcre_jit_compile.d from pcre_jit_compile.c
brew: superenv removed: -I/usr/local/include
making pcre_maketables.d from pcre_maketables.c
brew: superenv removed: -I/usr/local/include
making pcre_newline.d from pcre_newline.c
brew: superenv removed: -I/usr/local/include
making pcre_ord2utf8.d from pcre_ord2utf8.c
brew: superenv removed: -I/usr/local/include
making pcre_refcount.d from pcre_refcount.c
brew: superenv removed: -I/usr/local/include
making pcre_study.d from pcre_study.c
brew: superenv removed: -I/usr/local/include
making pcre_tables.d from pcre_tables.c
brew: superenv removed: -I/usr/local/include
making pcre_ucd.d from pcre_ucd.c
brew: superenv removed: -I/usr/local/include
making pcre_valid_utf8.d from pcre_valid_utf8.c
brew: superenv removed: -I/usr/local/include
making pcre_version.d from pcre_version.c
brew: superenv removed: -I/usr/local/include
making pcre_xclass.d from pcre_xclass.c
brew: superenv removed: -I/usr/local/include
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pcre_chartables.c -o pcre_chartables.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pcre_compile.c -o pcre_compile.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pcre_config.c -o pcre_config.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pcre_exec.c -o pcre_exec.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pcre_fullinfo.c -o pcre_fullinfo.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pcre_get.c -o pcre_get.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pcre_globals.c -o pcre_globals.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pcre_jit_compile.c -o pcre_jit_compile.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pcre_maketables.c -o pcre_maketables.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pcre_newline.c -o pcre_newline.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pcre_ord2utf8.c -o pcre_ord2utf8.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pcre_refcount.c -o pcre_refcount.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pcre_study.c -o pcre_study.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pcre_tables.c -o pcre_tables.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pcre_ucd.c -o pcre_ucd.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pcre_valid_utf8.c -o pcre_valid_utf8.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pcre_version.c -o pcre_version.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pcre_xclass.c -o pcre_xclass.o
brew: superenv removed: -I/usr/local/include -g -O2
rm -f libpcre.a
ar cr libpcre.a pcre_chartables.o pcre_compile.o pcre_config.o pcre_exec.o pcre_fullinfo.o pcre_get.o pcre_globals.o pcre_jit_compile.o pcre_maketables.o pcre_newline.o pcre_ord2utf8.o pcre_refcount.o pcre_study.o pcre_tables.o pcre_ucd.o pcre_valid_utf8.o pcre_version.o pcre_xclass.o
ranlib libpcre.a
making adler32.d from adler32.c
brew: superenv removed: -I/usr/local/include
making compress.d from compress.c
brew: superenv removed: -I/usr/local/include
making crc32.d from crc32.c
brew: superenv removed: -I/usr/local/include
making deflate.d from deflate.c
brew: superenv removed: -I/usr/local/include
making infback.d from infback.c
brew: superenv removed: -I/usr/local/include
making inffast.d from inffast.c
brew: superenv removed: -I/usr/local/include
making inflate.d from inflate.c
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making inftrees.d from inftrees.c
brew: superenv removed: -I/usr/local/include
making trees.d from trees.c
brew: superenv removed: -I/usr/local/include
making uncompr.d from uncompr.c
brew: superenv removed: -I/usr/local/include
making zutil.d from zutil.c
brew: superenv removed: -I/usr/local/include
make[4]: `Makedeps' is up to date.
cc -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c adler32.c -o adler32.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c compress.c -o compress.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c crc32.c -o crc32.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c deflate.c -o deflate.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c infback.c -o infback.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c inffast.c -o inffast.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c inflate.c -o inflate.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c inftrees.c -o inftrees.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c trees.c -o trees.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c uncompr.c -o uncompr.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -DUSE_MMAP -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c zutil.c -o zutil.o
brew: superenv removed: -I/usr/local/include -g -O2
rm -f libz.a
ar cr libz.a adler32.o compress.o crc32.o deflate.o infback.o inffast.o inflate.o inftrees.o trees.o uncompr.o zutil.o
ranlib libz.a
making bindtextdom.d from bindtextdom.c
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making dcgettext.d from dcgettext.c
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making dgettext.d from dgettext.c
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making gettext.d from gettext.c
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making finddomain.d from finddomain.c
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making loadmsgcat.d from loadmsgcat.c
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making textdomain.d from textdomain.c
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making l10nflist.d from l10nflist.c
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making explodename.d from explodename.c
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making dcigettext.d from dcigettext.c
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making dcngettext.d from dcngettext.c
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making dngettext.d from dngettext.c
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making ngettext.d from ngettext.c
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making plural.d from plural.c
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making plural-exp.d from plural-exp.c
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making langprefs.d from langprefs.c
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making localcharset.d from localcharset.c
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making localename.d from localename.c
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making printf.d from printf.c
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making osdep.d from osdep.c
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making intl-compat.d from intl-compat.c
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making hash-string.d from hash-string.c
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making lock.d from lock.c
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cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c bindtextdom.c -o bindtextdom.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c dcgettext.c -o dcgettext.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c dgettext.c -o dgettext.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c gettext.c -o gettext.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c finddomain.c -o finddomain.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c loadmsgcat.c -o loadmsgcat.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c textdomain.c -o textdomain.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c l10nflist.c -o l10nflist.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c explodename.c -o explodename.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c dcigettext.c -o dcigettext.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c dcngettext.c -o dcngettext.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c dngettext.c -o dngettext.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c ngettext.c -o ngettext.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c plural.c -o plural.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c plural-exp.c -o plural-exp.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c langprefs.c -o langprefs.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c localcharset.c -o localcharset.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c localename.c -o localename.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c printf.c -o printf.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c osdep.c -o osdep.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c intl-compat.c -o intl-compat.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c hash-string.c -o hash-string.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I. -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -g -O2 -c lock.c -o lock.o
brew: superenv removed: -I/usr/local/include -g -O2
rm -f libintl.a
ar cr libintl.a bindtextdom.o dcgettext.o dgettext.o gettext.o finddomain.o loadmsgcat.o textdomain.o l10nflist.o explodename.o dcigettext.o dcngettext.o dngettext.o ngettext.o plural.o plural-exp.o langprefs.o localcharset.o localename.o printf.o osdep.o intl-compat.o hash-string.o lock.o
/usr/bin/ranlib: file: libintl.a(printf.o) has no symbols
/usr/bin/ranlib: file: libintl.a(osdep.o) has no symbols
/usr/bin/ranlib: file: libintl.a(lock.o) has no symbols
ranlib libintl.a
ranlib: file: libintl.a(printf.o) has no symbols
ranlib: file: libintl.a(osdep.o) has no symbols
ranlib: file: libintl.a(lock.o) has no symbols
making regcomp.d from regcomp.c
brew: superenv removed: -I/usr/local/include
making regerror.d from regerror.c
brew: superenv removed: -I/usr/local/include
making regexec.d from regexec.c
brew: superenv removed: -I/usr/local/include
making tre-ast.d from tre-ast.c
brew: superenv removed: -I/usr/local/include
making tre-compile.d from tre-compile.c
brew: superenv removed: -I/usr/local/include
making tre-match-approx.d from tre-match-approx.c
brew: superenv removed: -I/usr/local/include
making tre-match-backtrack.d from tre-match-backtrack.c
brew: superenv removed: -I/usr/local/include
making tre-match-parallel.d from tre-match-parallel.c
brew: superenv removed: -I/usr/local/include
making tre-mem.d from tre-mem.c
brew: superenv removed: -I/usr/local/include
making tre-parse.d from tre-parse.c
brew: superenv removed: -I/usr/local/include
making tre-stack.d from tre-stack.c
brew: superenv removed: -I/usr/local/include
making xmalloc.d from xmalloc.c
brew: superenv removed: -I/usr/local/include
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c regcomp.c -o regcomp.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c regerror.c -o regerror.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c regexec.c -o regexec.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c tre-ast.c -o tre-ast.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c tre-compile.c -o tre-compile.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c tre-match-approx.c -o tre-match-approx.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c tre-match-backtrack.c -o tre-match-backtrack.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c tre-match-parallel.c -o tre-match-parallel.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c tre-mem.c -o tre-mem.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c tre-parse.c -o tre-parse.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c tre-stack.c -o tre-stack.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c xmalloc.c -o xmalloc.o
brew: superenv removed: -I/usr/local/include -g -O2
rm -f libtre.a
ar cr libtre.a regcomp.o regerror.o regexec.o tre-ast.o tre-compile.o tre-match-approx.o tre-match-backtrack.o tre-match-parallel.o tre-mem.o tre-parse.o tre-stack.o xmalloc.o
ranlib libtre.a
making bakslv.d from bakslv.c
brew: superenv removed: -I/usr/local/include
making binning.d from binning.c
brew: superenv removed: -I/usr/local/include
making cpoly.d from cpoly.c
brew: superenv removed: -I/usr/local/include
making cumsum.d from cumsum.c
brew: superenv removed: -I/usr/local/include
making fft.d from fft.c
brew: superenv removed: -I/usr/local/include
making fmin.d from fmin.c
brew: superenv removed: -I/usr/local/include
making integrate.d from integrate.c
brew: superenv removed: -I/usr/local/include
making interv.d from interv.c
brew: superenv removed: -I/usr/local/include
making lbfgsb.d from lbfgsb.c
brew: superenv removed: -I/usr/local/include
making machar.d from machar.c
brew: superenv removed: -I/usr/local/include
making maxcol.d from maxcol.c
brew: superenv removed: -I/usr/local/include
making pretty.d from pretty.c
brew: superenv removed: -I/usr/local/include
making rcont.d from rcont.c
brew: superenv removed: -I/usr/local/include
making rowsum.d from rowsum.c
brew: superenv removed: -I/usr/local/include
making stem.d from stem.c
brew: superenv removed: -I/usr/local/include
making strsignif.d from strsignif.c
brew: superenv removed: -I/usr/local/include
making tabulate.d from tabulate.c
brew: superenv removed: -I/usr/local/include
making uncmin.d from uncmin.c
brew: superenv removed: -I/usr/local/include
making zeroin.d from zeroin.c
brew: superenv removed: -I/usr/local/include
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c bakslv.c -o bakslv.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c binning.c -o binning.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c cpoly.c -o cpoly.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c cumsum.c -o cumsum.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c fft.c -o fft.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c fmin.c -o fmin.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c integrate.c -o integrate.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c interv.c -o interv.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c lbfgsb.c -o lbfgsb.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c machar.c -o machar.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c maxcol.c -o maxcol.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pretty.c -o pretty.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c rcont.c -o rcont.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c rowsum.c -o rowsum.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c stem.c -o stem.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c strsignif.c -o strsignif.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c tabulate.c -o tabulate.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c uncmin.c -o uncmin.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c zeroin.c -o zeroin.o
brew: superenv removed: -I/usr/local/include -g -O2
/usr/bin/gfortran -fPIC -c ch2inv.f -o ch2inv.o
/usr/bin/gfortran -fPIC -c chol.f -o chol.o
/usr/bin/gfortran -fPIC -c dchdc.f -o dchdc.o
/usr/bin/gfortran -fPIC -c dpbfa.f -o dpbfa.o
/usr/bin/gfortran -fPIC -c dpbsl.f -o dpbsl.o
/usr/bin/gfortran -fPIC -c dpoco.f -o dpoco.o
/usr/bin/gfortran -fPIC -c dpodi.f -o dpodi.o
/usr/bin/gfortran -fPIC -c dpofa.f -o dpofa.o
/usr/bin/gfortran -fPIC -c dposl.f -o dposl.o
/usr/bin/gfortran -fPIC -c dqrdc.f -o dqrdc.o
/usr/bin/gfortran -fPIC -c dqrdc2.f -o dqrdc2.o
/usr/bin/gfortran -fPIC -c dqrls.f -o dqrls.o
/usr/bin/gfortran -fPIC -c dqrsl.f -o dqrsl.o
/usr/bin/gfortran -fPIC -c dqrutl.f -o dqrutl.o
/usr/bin/gfortran -fPIC -c dsvdc.f -o dsvdc.o
/usr/bin/gfortran -fPIC -c dtrco.f -o dtrco.o
/usr/bin/gfortran -fPIC -c dtrsl.f -o dtrsl.o
/usr/bin/gfortran -fPIC -c eigen.f -o eigen.o
rm -f libappl.a
ar cr libappl.a bakslv.o binning.o cpoly.o cumsum.o fft.o fmin.o integrate.o interv.o lbfgsb.o machar.o maxcol.o pretty.o rcont.o rowsum.o stem.o strsignif.o tabulate.o uncmin.o zeroin.o ch2inv.o chol.o dchdc.o dpbfa.o dpbsl.o dpoco.o dpodi.o dpofa.o dposl.o dqrdc.o dqrdc2.o dqrls.o dqrsl.o dqrutl.o dsvdc.o dtrco.o dtrsl.o eigen.o
ranlib libappl.a
making mlutils.d from mlutils.c
brew: superenv removed: -I/usr/local/include
making d1mach.d from d1mach.c
brew: superenv removed: -I/usr/local/include
making i1mach.d from i1mach.c
brew: superenv removed: -I/usr/local/include
making fmax2.d from fmax2.c
brew: superenv removed: -I/usr/local/include
making fmin2.d from fmin2.c
brew: superenv removed: -I/usr/local/include
making fprec.d from fprec.c
brew: superenv removed: -I/usr/local/include
making fround.d from fround.c
brew: superenv removed: -I/usr/local/include
making ftrunc.d from ftrunc.c
brew: superenv removed: -I/usr/local/include
making sign.d from sign.c
brew: superenv removed: -I/usr/local/include
making fsign.d from fsign.c
brew: superenv removed: -I/usr/local/include
making imax2.d from imax2.c
brew: superenv removed: -I/usr/local/include
making imin2.d from imin2.c
brew: superenv removed: -I/usr/local/include
making chebyshev.d from chebyshev.c
brew: superenv removed: -I/usr/local/include
making log1p.d from log1p.c
brew: superenv removed: -I/usr/local/include
making expm1.d from expm1.c
brew: superenv removed: -I/usr/local/include
making lgammacor.d from lgammacor.c
brew: superenv removed: -I/usr/local/include
making gammalims.d from gammalims.c
brew: superenv removed: -I/usr/local/include
making stirlerr.d from stirlerr.c
brew: superenv removed: -I/usr/local/include
making bd0.d from bd0.c
brew: superenv removed: -I/usr/local/include
making gamma.d from gamma.c
brew: superenv removed: -I/usr/local/include
making lgamma.d from lgamma.c
brew: superenv removed: -I/usr/local/include
making gamma_cody.d from gamma_cody.c
brew: superenv removed: -I/usr/local/include
making beta.d from beta.c
brew: superenv removed: -I/usr/local/include
making lbeta.d from lbeta.c
brew: superenv removed: -I/usr/local/include
making polygamma.d from polygamma.c
brew: superenv removed: -I/usr/local/include
making bessel_i.d from bessel_i.c
brew: superenv removed: -I/usr/local/include
making bessel_j.d from bessel_j.c
brew: superenv removed: -I/usr/local/include
making bessel_k.d from bessel_k.c
brew: superenv removed: -I/usr/local/include
making bessel_y.d from bessel_y.c
brew: superenv removed: -I/usr/local/include
making choose.d from choose.c
brew: superenv removed: -I/usr/local/include
making snorm.d from snorm.c
brew: superenv removed: -I/usr/local/include
making sexp.d from sexp.c
brew: superenv removed: -I/usr/local/include
making dgamma.d from dgamma.c
brew: superenv removed: -I/usr/local/include
making pgamma.d from pgamma.c
brew: superenv removed: -I/usr/local/include
making qgamma.d from qgamma.c
brew: superenv removed: -I/usr/local/include
making rgamma.d from rgamma.c
brew: superenv removed: -I/usr/local/include
making dbeta.d from dbeta.c
brew: superenv removed: -I/usr/local/include
making pbeta.d from pbeta.c
brew: superenv removed: -I/usr/local/include
making qbeta.d from qbeta.c
brew: superenv removed: -I/usr/local/include
making rbeta.d from rbeta.c
brew: superenv removed: -I/usr/local/include
making dunif.d from dunif.c
brew: superenv removed: -I/usr/local/include
making punif.d from punif.c
brew: superenv removed: -I/usr/local/include
making qunif.d from qunif.c
brew: superenv removed: -I/usr/local/include
making runif.d from runif.c
brew: superenv removed: -I/usr/local/include
making dnorm.d from dnorm.c
brew: superenv removed: -I/usr/local/include
making pnorm.d from pnorm.c
brew: superenv removed: -I/usr/local/include
making qnorm.d from qnorm.c
brew: superenv removed: -I/usr/local/include
making rnorm.d from rnorm.c
brew: superenv removed: -I/usr/local/include
making dlnorm.d from dlnorm.c
brew: superenv removed: -I/usr/local/include
making plnorm.d from plnorm.c
brew: superenv removed: -I/usr/local/include
making qlnorm.d from qlnorm.c
brew: superenv removed: -I/usr/local/include
making rlnorm.d from rlnorm.c
brew: superenv removed: -I/usr/local/include
making df.d from df.c
brew: superenv removed: -I/usr/local/include
making pf.d from pf.c
brew: superenv removed: -I/usr/local/include
making qf.d from qf.c
brew: superenv removed: -I/usr/local/include
making rf.d from rf.c
brew: superenv removed: -I/usr/local/include
making dnf.d from dnf.c
brew: superenv removed: -I/usr/local/include
making dt.d from dt.c
brew: superenv removed: -I/usr/local/include
making pt.d from pt.c
brew: superenv removed: -I/usr/local/include
making qt.d from qt.c
brew: superenv removed: -I/usr/local/include
making rt.d from rt.c
brew: superenv removed: -I/usr/local/include
making dnt.d from dnt.c
brew: superenv removed: -I/usr/local/include
making dchisq.d from dchisq.c
brew: superenv removed: -I/usr/local/include
making pchisq.d from pchisq.c
brew: superenv removed: -I/usr/local/include
making qchisq.d from qchisq.c
brew: superenv removed: -I/usr/local/include
making rchisq.d from rchisq.c
brew: superenv removed: -I/usr/local/include
making rnchisq.d from rnchisq.c
brew: superenv removed: -I/usr/local/include
making dbinom.d from dbinom.c
brew: superenv removed: -I/usr/local/include
making pbinom.d from pbinom.c
brew: superenv removed: -I/usr/local/include
making qbinom.d from qbinom.c
brew: superenv removed: -I/usr/local/include
making rbinom.d from rbinom.c
brew: superenv removed: -I/usr/local/include
making rmultinom.d from rmultinom.c
brew: superenv removed: -I/usr/local/include
making dcauchy.d from dcauchy.c
brew: superenv removed: -I/usr/local/include
making pcauchy.d from pcauchy.c
brew: superenv removed: -I/usr/local/include
making qcauchy.d from qcauchy.c
brew: superenv removed: -I/usr/local/include
making rcauchy.d from rcauchy.c
brew: superenv removed: -I/usr/local/include
making dexp.d from dexp.c
brew: superenv removed: -I/usr/local/include
making pexp.d from pexp.c
brew: superenv removed: -I/usr/local/include
making qexp.d from qexp.c
brew: superenv removed: -I/usr/local/include
making rexp.d from rexp.c
brew: superenv removed: -I/usr/local/include
making dgeom.d from dgeom.c
brew: superenv removed: -I/usr/local/include
making pgeom.d from pgeom.c
brew: superenv removed: -I/usr/local/include
making qgeom.d from qgeom.c
brew: superenv removed: -I/usr/local/include
making rgeom.d from rgeom.c
brew: superenv removed: -I/usr/local/include
making dhyper.d from dhyper.c
brew: superenv removed: -I/usr/local/include
making phyper.d from phyper.c
brew: superenv removed: -I/usr/local/include
making qhyper.d from qhyper.c
brew: superenv removed: -I/usr/local/include
making rhyper.d from rhyper.c
brew: superenv removed: -I/usr/local/include
making dnbinom.d from dnbinom.c
brew: superenv removed: -I/usr/local/include
making pnbinom.d from pnbinom.c
brew: superenv removed: -I/usr/local/include
making qnbinom.d from qnbinom.c
brew: superenv removed: -I/usr/local/include
making rnbinom.d from rnbinom.c
brew: superenv removed: -I/usr/local/include
making dpois.d from dpois.c
brew: superenv removed: -I/usr/local/include
making ppois.d from ppois.c
brew: superenv removed: -I/usr/local/include
making qpois.d from qpois.c
brew: superenv removed: -I/usr/local/include
making rpois.d from rpois.c
brew: superenv removed: -I/usr/local/include
making dweibull.d from dweibull.c
brew: superenv removed: -I/usr/local/include
making pweibull.d from pweibull.c
brew: superenv removed: -I/usr/local/include
making qweibull.d from qweibull.c
brew: superenv removed: -I/usr/local/include
making rweibull.d from rweibull.c
brew: superenv removed: -I/usr/local/include
making dlogis.d from dlogis.c
brew: superenv removed: -I/usr/local/include
making plogis.d from plogis.c
brew: superenv removed: -I/usr/local/include
making qlogis.d from qlogis.c
brew: superenv removed: -I/usr/local/include
making rlogis.d from rlogis.c
brew: superenv removed: -I/usr/local/include
making dnchisq.d from dnchisq.c
brew: superenv removed: -I/usr/local/include
making pnchisq.d from pnchisq.c
brew: superenv removed: -I/usr/local/include
making qnchisq.d from qnchisq.c
brew: superenv removed: -I/usr/local/include
making dnbeta.d from dnbeta.c
brew: superenv removed: -I/usr/local/include
making pnbeta.d from pnbeta.c
brew: superenv removed: -I/usr/local/include
making qnbeta.d from qnbeta.c
brew: superenv removed: -I/usr/local/include
making pnf.d from pnf.c
brew: superenv removed: -I/usr/local/include
making pnt.d from pnt.c
brew: superenv removed: -I/usr/local/include
making qnf.d from qnf.c
brew: superenv removed: -I/usr/local/include
making qnt.d from qnt.c
brew: superenv removed: -I/usr/local/include
making ptukey.d from ptukey.c
brew: superenv removed: -I/usr/local/include
making qtukey.d from qtukey.c
brew: superenv removed: -I/usr/local/include
making toms708.d from toms708.c
brew: superenv removed: -I/usr/local/include
making wilcox.d from wilcox.c
brew: superenv removed: -I/usr/local/include
making signrank.d from signrank.c
brew: superenv removed: -I/usr/local/include
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c mlutils.c -o mlutils.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c d1mach.c -o d1mach.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c i1mach.c -o i1mach.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c fmax2.c -o fmax2.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c fmin2.c -o fmin2.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c fprec.c -o fprec.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c fround.c -o fround.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c ftrunc.c -o ftrunc.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c sign.c -o sign.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c fsign.c -o fsign.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c imax2.c -o imax2.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c imin2.c -o imin2.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c chebyshev.c -o chebyshev.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c log1p.c -o log1p.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c expm1.c -o expm1.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c lgammacor.c -o lgammacor.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c gammalims.c -o gammalims.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c stirlerr.c -o stirlerr.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c bd0.c -o bd0.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c gamma.c -o gamma.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c lgamma.c -o lgamma.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c gamma_cody.c -o gamma_cody.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c beta.c -o beta.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c lbeta.c -o lbeta.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c polygamma.c -o polygamma.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c bessel_i.c -o bessel_i.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c bessel_j.c -o bessel_j.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c bessel_k.c -o bessel_k.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c bessel_y.c -o bessel_y.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c choose.c -o choose.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c snorm.c -o snorm.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c sexp.c -o sexp.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dgamma.c -o dgamma.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pgamma.c -o pgamma.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qgamma.c -o qgamma.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c rgamma.c -o rgamma.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dbeta.c -o dbeta.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pbeta.c -o pbeta.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qbeta.c -o qbeta.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c rbeta.c -o rbeta.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dunif.c -o dunif.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c punif.c -o punif.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qunif.c -o qunif.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c runif.c -o runif.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dnorm.c -o dnorm.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pnorm.c -o pnorm.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qnorm.c -o qnorm.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c rnorm.c -o rnorm.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dlnorm.c -o dlnorm.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c plnorm.c -o plnorm.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qlnorm.c -o qlnorm.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c rlnorm.c -o rlnorm.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c df.c -o df.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pf.c -o pf.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qf.c -o qf.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c rf.c -o rf.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dnf.c -o dnf.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dt.c -o dt.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pt.c -o pt.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qt.c -o qt.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c rt.c -o rt.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dnt.c -o dnt.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dchisq.c -o dchisq.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pchisq.c -o pchisq.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qchisq.c -o qchisq.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c rchisq.c -o rchisq.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c rnchisq.c -o rnchisq.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dbinom.c -o dbinom.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pbinom.c -o pbinom.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qbinom.c -o qbinom.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c rbinom.c -o rbinom.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c rmultinom.c -o rmultinom.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dcauchy.c -o dcauchy.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pcauchy.c -o pcauchy.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qcauchy.c -o qcauchy.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c rcauchy.c -o rcauchy.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dexp.c -o dexp.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pexp.c -o pexp.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qexp.c -o qexp.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c rexp.c -o rexp.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dgeom.c -o dgeom.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pgeom.c -o pgeom.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qgeom.c -o qgeom.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c rgeom.c -o rgeom.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dhyper.c -o dhyper.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c phyper.c -o phyper.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qhyper.c -o qhyper.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c rhyper.c -o rhyper.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dnbinom.c -o dnbinom.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pnbinom.c -o pnbinom.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qnbinom.c -o qnbinom.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c rnbinom.c -o rnbinom.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dpois.c -o dpois.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c ppois.c -o ppois.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qpois.c -o qpois.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c rpois.c -o rpois.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dweibull.c -o dweibull.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pweibull.c -o pweibull.o
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cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qweibull.c -o qweibull.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c rweibull.c -o rweibull.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dlogis.c -o dlogis.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c plogis.c -o plogis.o
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cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qlogis.c -o qlogis.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c rlogis.c -o rlogis.o
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cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dnchisq.c -o dnchisq.o
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cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pnchisq.c -o pnchisq.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qnchisq.c -o qnchisq.o
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cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dnbeta.c -o dnbeta.o
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cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pnbeta.c -o pnbeta.o
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cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qnbeta.c -o qnbeta.o
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cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pnf.c -o pnf.o
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cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c pnt.c -o pnt.o
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cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qnf.c -o qnf.o
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cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qnt.c -o qnt.o
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cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c ptukey.c -o ptukey.o
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cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qtukey.c -o qtukey.o
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cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c toms708.c -o toms708.o
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cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c wilcox.c -o wilcox.o
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cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c signrank.c -o signrank.o
brew: superenv removed: -I/usr/local/include -g -O2
rm -rf libnmath.a
ar cr libnmath.a mlutils.o d1mach.o i1mach.o fmax2.o fmin2.o fprec.o fround.o ftrunc.o sign.o fsign.o imax2.o imin2.o chebyshev.o log1p.o expm1.o lgammacor.o gammalims.o stirlerr.o bd0.o gamma.o lgamma.o gamma_cody.o beta.o lbeta.o polygamma.o bessel_i.o bessel_j.o bessel_k.o bessel_y.o choose.o snorm.o sexp.o dgamma.o pgamma.o qgamma.o rgamma.o dbeta.o pbeta.o qbeta.o rbeta.o dunif.o punif.o qunif.o runif.o dnorm.o pnorm.o qnorm.o rnorm.o dlnorm.o plnorm.o qlnorm.o rlnorm.o df.o pf.o qf.o rf.o dnf.o dt.o pt.o qt.o rt.o dnt.o dchisq.o pchisq.o qchisq.o rchisq.o rnchisq.o dbinom.o pbinom.o qbinom.o rbinom.o rmultinom.o dcauchy.o pcauchy.o qcauchy.o rcauchy.o dexp.o pexp.o qexp.o rexp.o dgeom.o pgeom.o qgeom.o rgeom.o dhyper.o phyper.o qhyper.o rhyper.o dnbinom.o pnbinom.o qnbinom.o rnbinom.o dpois.o ppois.o qpois.o rpois.o dweibull.o pweibull.o qweibull.o rweibull.o dlogis.o plogis.o qlogis.o rlogis.o dnchisq.o pnchisq.o qnchisq.o dnbeta.o pnbeta.o qnbeta.o pnf.o pnt.o qnf.o qnt.o ptukey.o qtukey.o toms708.o wilcox.o signrank.o
/usr/bin/ranlib: file: libnmath.a(mlutils.o) has no symbols
/usr/bin/ranlib: file: libnmath.a(log1p.o) has no symbols
/usr/bin/ranlib: file: libnmath.a(expm1.o) has no symbols
ranlib libnmath.a
ranlib: file: libnmath.a(mlutils.o) has no symbols
ranlib: file: libnmath.a(log1p.o) has no symbols
ranlib: file: libnmath.a(expm1.o) has no symbols
config.status: creating src/unix/Makefile
making dynload.d from dynload.c
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making edit.d from edit.c
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cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dynload.c -o dynload.o
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cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c edit.c -o edit.o
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cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c stubs.c -o stubs.o
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cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c system.c -o system.o
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cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c sys-unix.c -o sys-unix.o
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cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c sys-std.c -o sys-std.o
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cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c X11.c -o X11.o
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cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c Rembedded.c -o Rembedded.o
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cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c aqua.c -o aqua.o
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ar cr libunix.a dynload.o edit.o stubs.o system.o sys-unix.o sys-std.o X11.o Rembedded.o aqua.o
ranlib libunix.a
cc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -DR_HOME='"/private/tmp/r-d7n2/R-2.15.3"' -o Rscript \
./Rscript.c
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config.status: creating src/main/Makefile
making CConverters.d from CConverters.c
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making CommandLineArgs.d from CommandLineArgs.c
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making Rdynload.d from Rdynload.c
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making Renviron.d from Renviron.c
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making RNG.d from RNG.c
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making relop.d from relop.c
brew: superenv removed: -I/usr/local/include
making rlocale.d from rlocale.c
brew: superenv removed: -I/usr/local/include
making saveload.d from saveload.c
brew: superenv removed: -I/usr/local/include
making scan.d from scan.c
brew: superenv removed: -I/usr/local/include
making seq.d from seq.c
brew: superenv removed: -I/usr/local/include
making serialize.d from serialize.c
brew: superenv removed: -I/usr/local/include
making size.d from size.c
brew: superenv removed: -I/usr/local/include
making sort.d from sort.c
brew: superenv removed: -I/usr/local/include
making source.d from source.c
brew: superenv removed: -I/usr/local/include
making split.d from split.c
brew: superenv removed: -I/usr/local/include
making sprintf.d from sprintf.c
brew: superenv removed: -I/usr/local/include
making startup.d from startup.c
brew: superenv removed: -I/usr/local/include
making subassign.d from subassign.c
brew: superenv removed: -I/usr/local/include
making subscript.d from subscript.c
brew: superenv removed: -I/usr/local/include
making subset.d from subset.c
brew: superenv removed: -I/usr/local/include
making summary.d from summary.c
brew: superenv removed: -I/usr/local/include
making sysutils.d from sysutils.c
brew: superenv removed: -I/usr/local/include
making unique.d from unique.c
brew: superenv removed: -I/usr/local/include
making util.d from util.c
brew: superenv removed: -I/usr/local/include
making version.d from version.c
brew: superenv removed: -I/usr/local/include
making vfonts.d from vfonts.c
brew: superenv removed: -I/usr/local/include
making Rmain.d from Rmain.c
brew: superenv removed: -I/usr/local/include
making alloca.d from alloca.c
brew: superenv removed: -I/usr/local/include
making mkdtemp.d from mkdtemp.c
brew: superenv removed: -I/usr/local/include
making strdup.d from strdup.c
brew: superenv removed: -I/usr/local/include
making strncasecmp.d from strncasecmp.c
brew: superenv removed: -I/usr/local/include
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c CConverters.c -o CConverters.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c CommandLineArgs.c -o CommandLineArgs.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c Rdynload.c -o Rdynload.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c Renviron.c -o Renviron.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c RNG.c -o RNG.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c agrep.c -o agrep.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c apply.c -o apply.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c arithmetic.c -o arithmetic.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c array.c -o array.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c attrib.c -o attrib.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c base.c -o base.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c bind.c -o bind.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c builtin.c -o builtin.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c character.c -o character.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c coerce.c -o coerce.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c colors.c -o colors.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c complex.c -o complex.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c connections.c -o connections.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c context.c -o context.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c cov.c -o cov.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c cum.c -o cum.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dcf.c -o dcf.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c datetime.c -o datetime.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c debug.c -o debug.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c deparse.c -o deparse.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c deriv.c -o deriv.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c devices.c -o devices.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dotcode.c -o dotcode.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dounzip.c -o dounzip.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dstruct.c -o dstruct.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c duplicate.c -o duplicate.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c engine.c -o engine.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c envir.c -o envir.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c errors.c -o errors.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c eval.c -o eval.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c format.c -o format.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c fourier.c -o fourier.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c gevents.c -o gevents.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c gram.c -o gram.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c gram-ex.c -o gram-ex.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c gramLatex.c -o gramLatex.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c gramRd.c -o gramRd.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c graphics.c -o graphics.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c grep.c -o grep.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c identical.c -o identical.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c inlined.c -o inlined.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c inspect.c -o inspect.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c internet.c -o internet.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c iosupport.c -o iosupport.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c lapack.c -o lapack.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c list.c -o list.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c localecharset.c -o localecharset.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c logic.c -o logic.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c main.c -o main.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c mapply.c -o mapply.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c match.c -o match.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c memory.c -o memory.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c model.c -o model.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c names.c -o names.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c objects.c -o objects.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c optim.c -o optim.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c optimize.c -o optimize.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c options.c -o options.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c par.c -o par.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c paste.c -o paste.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c platform.c -o platform.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c plot.c -o plot.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c plot3d.c -o plot3d.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c plotmath.c -o plotmath.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c print.c -o print.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c printarray.c -o printarray.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c printvector.c -o printvector.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c printutils.c -o printutils.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c qsort.c -o qsort.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c random.c -o random.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c raw.c -o raw.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c registration.c -o registration.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c relop.c -o relop.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c rlocale.c -o rlocale.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c saveload.c -o saveload.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c scan.c -o scan.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c seq.c -o seq.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c serialize.c -o serialize.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c size.c -o size.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c sort.c -o sort.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c source.c -o source.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c split.c -o split.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c sprintf.c -o sprintf.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c startup.c -o startup.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c subassign.c -o subassign.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c subscript.c -o subscript.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c subset.c -o subset.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c summary.c -o summary.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c sysutils.c -o sysutils.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c unique.c -o unique.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c util.c -o util.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c version.c -o version.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c vfonts.c -o vfonts.o
brew: superenv removed: -I/usr/local/include -g -O2
/usr/bin/gfortran -fPIC -c xxxpr.f -o xxxpr.o
cc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -install_name libR.dylib -compatibility_version 2.15.0 -current_version 2.15.3 -headerpad_max_install_names -o libR.dylib CConverters.o CommandLineArgs.o Rdynload.o Renviron.o RNG.o agrep.o apply.o arithmetic.o array.o attrib.o base.o bind.o builtin.o character.o coerce.o colors.o complex.o connections.o context.o cov.o cum.o dcf.o datetime.o debug.o deparse.o deriv.o devices.o dotcode.o dounzip.o dstruct.o duplicate.o engine.o envir.o errors.o eval.o format.o fourier.o gevents.o gram.o gram-ex.o gramLatex.o gramRd.o graphics.o grep.o identical.o inlined.o inspect.o internet.o iosupport.o lapack.o list.o localecharset.o logic.o main.o mapply.o match.o memory.o model.o names.o objects.o optim.o optimize.o options.o par.o paste.o platform.o plot.o plot3d.o plotmath.o print.o printarray.o printvector.o printutils.o qsort.o random.o raw.o registration.o relop.o rlocale.o saveload.o scan.o seq.o serialize.o size.o sort.o source.o split.o sprintf.o startup.o subassign.o subscript.o subset.o summary.o sysutils.o unique.o util.o version.o vfonts.o xxxpr.o ../unix/Rembedded.o ../unix/libunix.a ../appl/libappl.a ../nmath/libnmath.a ../extra/zlib/libz.a ../extra/bzip2/libbz2.a ../extra/pcre/libpcre.a ../extra/tre/libtre.a ../extra/intl/libintl.a -L../../lib -lRblas -L/usr/lib/gcc/i686-apple-darwin11/4.2.1/x86_64 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1 -L/usr/lib -lgfortran -Wl,-framework -Wl,CoreFoundation -lreadline -llzma -licucore -lm -liconv
brew: superenv removed: -L/usr/local/lib
mkdir /private/tmp/r-d7n2/R-2.15.3/bin/exec
cc -I../../src/extra/zlib -I../../src/extra/bzip2 -I../../src/extra/pcre -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c Rmain.c -o Rmain.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -L/usr/local/lib -o R.bin Rmain.o -L../../lib -lR -lRblas
brew: superenv removed: -L/usr/local/lib
making Rhttpd.d from Rhttpd.c
brew: superenv removed: -I/usr/local/include
making Rsock.d from Rsock.c
brew: superenv removed: -I/usr/local/include
making internet.d from internet.c
brew: superenv removed: -I/usr/local/include
making nanoftp.d from nanoftp.c
brew: superenv removed: -I/usr/local/include
making nanohttp.d from nanohttp.c
brew: superenv removed: -I/usr/local/include
making sock.d from sock.c
brew: superenv removed: -I/usr/local/include
making sockconn.d from sockconn.c
brew: superenv removed: -I/usr/local/include
make[4]: `Makedeps' is up to date.
cc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c Rhttpd.c -o Rhttpd.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c Rsock.c -o Rsock.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c internet.c -o internet.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c nanoftp.c -o nanoftp.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c nanohttp.c -o nanohttp.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c sock.c -o sock.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c sockconn.c -o sockconn.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o internet.so Rhttpd.o Rsock.o internet.o nanoftp.o nanohttp.o sock.o sockconn.o -L../../../lib -lR -dylib_file libRblas.dylib:../../../lib/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
brew: superenv removed: -L/usr/local/lib
mkdir /private/tmp/r-d7n2/R-2.15.3/modules
making Lapack.d from Lapack.c
brew: superenv removed: -I/usr/local/include
make[4]: `Makedeps' is up to date.
/usr/bin/gfortran -fPIC -ffloat-store -c dlamch.f -o dlamch.o
/usr/bin/gfortran -fPIC -c dlapack.f -o dlapack.o
/usr/bin/gfortran -fPIC -c cmplx.f -o cmplx.o
cc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o libRlapack.dylib dlamch.o dlapack.o cmplx.o -install_name libRlapack.dylib -compatibility_version 2.15.0 -current_version 2.15.3 -headerpad_max_install_names -L../../../lib -lRblas -L/usr/lib/gcc/i686-apple-darwin11/4.2.1/x86_64 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1 -L/usr/lib -lgfortran -L../../../lib -lR -dylib_file libRblas.dylib:../../../lib/libRblas.dylib
brew: superenv removed: -L/usr/local/lib
cc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c Lapack.c -o Lapack.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o lapack.so Lapack.o -L../../../lib -lR -dylib_file libRblas.dylib:../../../lib/libRblas.dylib -Wl,-framework -Wl,CoreFoundation -L../../../lib -lRlapack -L../../../lib -lRblas -L/usr/lib/gcc/i686-apple-darwin11/4.2.1/x86_64 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1 -L/usr/lib -lgfortran
brew: superenv removed: -L/usr/local/lib
/private/tmp/r-d7n2/R-2.15.3/lib/libRlapack.dylib is unchanged
making g_alab_her.d from g_alab_her.c
brew: superenv removed: -I/usr/local/include
making g_cntrlify.d from g_cntrlify.c
brew: superenv removed: -I/usr/local/include
making g_fontdb.d from g_fontdb.c
brew: superenv removed: -I/usr/local/include
making g_her_glyph.d from g_her_glyph.c
brew: superenv removed: -I/usr/local/include
make[4]: `Makedeps' is up to date.
cc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c g_alab_her.c -o g_alab_her.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c g_cntrlify.c -o g_cntrlify.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c g_fontdb.c -o g_fontdb.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c g_her_glyph.c -o g_her_glyph.o
brew: superenv removed: -I/usr/local/include -g -O2
cc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o vfonts.so g_alab_her.o g_cntrlify.o g_fontdb.o g_her_glyph.o -L../../../lib -lR -dylib_file libRblas.dylib:../../../lib/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
brew: superenv removed: -L/usr/local/lib
making dataentry.d from dataentry.c
brew: superenv removed: -I/opt/X11/include -I/opt/X11/include/freetype2 -I/opt/X11/include -I/opt/X11/include -I/usr/local/include
making devX11.d from devX11.c
brew: superenv removed: -I/opt/X11/include -I/opt/X11/include/freetype2 -I/opt/X11/include -I/opt/X11/include -I/usr/local/include
making rotated.d from rotated.c
brew: superenv removed: -I/opt/X11/include -I/opt/X11/include/freetype2 -I/opt/X11/include -I/opt/X11/include -I/usr/local/include
making rbitmap.d from rbitmap.c
brew: superenv removed: -I/opt/X11/include -I/opt/X11/include/freetype2 -I/opt/X11/include -I/opt/X11/include -I/usr/local/include
make[4]: `Makedeps' is up to date.
cc -I. -I../../../src/include -I../../../src/include -I/opt/X11/include/cairo -I/opt/X11/include/pixman-1 -I/opt/X11/include -I/opt/X11/include/freetype2 -I/opt/X11/include -I/opt/X11/include/libpng15 -I/opt/X11/include -I../../../src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c dataentry.c -o dataentry.o
brew: superenv removed: -I/opt/X11/include -I/opt/X11/include/freetype2 -I/opt/X11/include -I/opt/X11/include -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I/opt/X11/include/cairo -I/opt/X11/include/pixman-1 -I/opt/X11/include -I/opt/X11/include/freetype2 -I/opt/X11/include -I/opt/X11/include/libpng15 -I/opt/X11/include -I../../../src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c devX11.c -o devX11.o
brew: superenv removed: -I/opt/X11/include -I/opt/X11/include/freetype2 -I/opt/X11/include -I/opt/X11/include -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I/opt/X11/include/cairo -I/opt/X11/include/pixman-1 -I/opt/X11/include -I/opt/X11/include/freetype2 -I/opt/X11/include -I/opt/X11/include/libpng15 -I/opt/X11/include -I../../../src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c rotated.c -o rotated.o
brew: superenv removed: -I/opt/X11/include -I/opt/X11/include/freetype2 -I/opt/X11/include -I/opt/X11/include -I/usr/local/include -g -O2
cc -I. -I../../../src/include -I../../../src/include -I/opt/X11/include/cairo -I/opt/X11/include/pixman-1 -I/opt/X11/include -I/opt/X11/include/freetype2 -I/opt/X11/include -I/opt/X11/include/libpng15 -I/opt/X11/include -I../../../src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fPIC -g -O2 -c rbitmap.c -o rbitmap.o
brew: superenv removed: -I/opt/X11/include -I/opt/X11/include/freetype2 -I/opt/X11/include -I/opt/X11/include -I/usr/local/include -g -O2
cc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o R_X11.so dataentry.o devX11.o rotated.o rbitmap.o -lSM -lICE -L/opt/X11/lib -lz -lcairo -lz -lpixman-1 -lfontconfig -lexpat -lfreetype -lz -lbz2 -lpng15 -lz -lxcb-shm -lX11-xcb -lxcb-render -lXrender -lX11 -lxcb -lXau -lXdmcp -lX11 -lXt -lXmu -ltiff -ljpeg -lpng -lz -L../../../lib -lR -dylib_file libRblas.dylib:../../../lib/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
brew: superenv removed: -L/usr/local/lib -L/opt/X11/lib
mkdir ../../library
building system startup profile
mkdir ../../../library/base
mkdir ../../../library/base/R
building package 'base'
mkdir ../../../library/base/demo
mkdir ../../../library/base/po
building package 'tools'
mkdir ../../../library/tools
mkdir ../../../library/tools/R
mkdir ../../../library/tools/po
making text.d from text.c
brew: superenv removed: -I../../../../src/include -I/usr/local/include
making init.d from init.c
brew: superenv removed: -I../../../../src/include -I/usr/local/include
making Rmd5.d from Rmd5.c
brew: superenv removed: -I../../../../src/include -I/usr/local/include
making md5.d from md5.c
brew: superenv removed: -I../../../../src/include -I/usr/local/include
making signals.d from signals.c
brew: superenv removed: -I../../../../src/include -I/usr/local/include
cc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -g -O2 -c text.c -o text.o
brew: superenv removed: -I../../../../src/include -I/usr/local/include -g -O2
cc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -g -O2 -c init.c -o init.o
brew: superenv removed: -I../../../../src/include -I/usr/local/include -g -O2
cc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -g -O2 -c Rmd5.c -o Rmd5.o
brew: superenv removed: -I../../../../src/include -I/usr/local/include -g -O2
cc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -g -O2 -c md5.c -o md5.o
brew: superenv removed: -I../../../../src/include -I/usr/local/include -g -O2
cc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -g -O2 -c signals.c -o signals.o
brew: superenv removed: -I../../../../src/include -I/usr/local/include -g -O2
cc -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o tools.so text.o init.o Rmd5.o md5.o signals.o -L../../../../lib -lR -dylib_file libRblas.dylib:../../../../lib/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
brew: superenv removed: -L/usr/local/lib
make[6]: `Makedeps' is up to date.
mkdir ../../../../library/tools/libs
dyld: Symbol not found: _rl_sort_completion_matches
Referenced from: /private/tmp/r-d7n2/R-2.15.3/lib/libR.dylib
Expected in: flat namespace
in /private/tmp/r-d7n2/R-2.15.3/lib/libR.dylib
/bin/sh: line 1: 50310 Done echo "tools:::.install_package_description('.', '"../../../library/tools"')"
50311 Trace/BPT trap: 5 | R_DEFAULT_PACKAGES=NULL ../../../bin/R --vanilla --slave > /dev/null
make[3]: *** [all] Error 133
make[2]: *** [R] Error 1
make[1]: *** [R] Error 1
make: *** [R] Error 1
==> Configuration
HOMEBREW_VERSION: 0.9.4
HEAD: 3730c0636fa344ad1e49697c3c5a8b867c62353a
CPU: quad-core 64-bit sandybridge
OS X: 10.8.3-x86_64
Xcode: 4.6.1
CLT: 4.6.0.0.1.1362189000
X11: 2.7.4 => /opt/X11
==> ENV
CC: cc
CXX: c++
MAKEFLAGS: -j1
CMAKE_PREFIX_PATH: /usr/local/opt/readline:/usr/local
CMAKE_INCLUDE_PATH: /opt/X11/include/freetype2:/usr/include/libxml2:/opt/X11/include
CMAKE_LIBRARY_PATH: /opt/X11/lib
PKG_CONFIG_PATH: /usr/local/opt/libtiff/lib/pkgconfig
PKG_CONFIG_LIBDIR: /usr/lib/pkgconfig:/usr/local/Library/ENV/pkgconfig/10.8:/opt/X11/lib/pkgconfig:/opt/X11/share/pkgconfig
HOMEBREW_MAKE_JOBS: 1
ACLOCAL_PATH: /usr/local/share/aclocal:/opt/X11/share/aclocal
OBJC: cc
PATH: /usr/local/Library/ENV/4.3:/usr/local/opt/libtiff/bin:/usr/local/opt/jpeg/bin:/usr/local/opt/python/bin:/opt/X11/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/bin:/usr/local/bin
Error: r did not build
Logs: /Users/Andres/Library/Logs/Homebrew/r/config.log
These open issues may also help:
https://github.com/mxcl/homebrew/pull/18943
https://github.com/mxcl/homebrew/issues/18841
https://github.com/mxcl/homebrew/issues/17414
https://github.com/mxcl/homebrew/issues/15990
https://github.com/mxcl/homebrew/issues/16373
https://github.com/mxcl/homebrew/pull/17022
https://github.com/mxcl/homebrew/issues/16303
HOMEBREW_MAKE_JOBS=1 VERBOSE=1 brew install r --env=std
==> Downloading http://cran.r-project.org/src/base/R-2/R-2.15.3.tar.gz
Already downloaded: /Library/Caches/Homebrew/r-2.15.3.tar.gz
tar xf /Library/Caches/Homebrew/r-2.15.3.tar.gz
==> Using Homebrew-provided fortran compiler.
This may be changed by setting the FC environment variable.
==> ./configure --prefix=/usr/local/Cellar/r/2.15.3 --with-aqua --enable-R-framework --with-lapack
./configure --prefix=/usr/local/Cellar/r/2.15.3 --with-aqua --enable-R-framework --with-lapack
checking build system type... x86_64-apple-darwin12.3.0
checking host system type... x86_64-apple-darwin12.3.0
loading site script './config.site'
loading build-specific script './config.site'
checking for pwd... /bin/pwd
checking whether builddir is srcdir... yes
checking for working aclocal... found
checking for working autoconf... found
checking for working automake... found
checking for working autoheader... found
checking for gawk... gawk
checking whether ln -s works... yes
checking for bison... bison -y
checking for ar... ar
checking for a BSD-compatible install... /usr/local/bin/ginstall -c
checking for sed... /usr/bin/sed
checking for which... /usr/bin/which
checking for less... /usr/bin/less
checking for gtar... no
checking for gnutar... /usr/bin/gnutar
checking for tex... /usr/texbin/tex
checking for pdftex... /usr/texbin/pdftex
checking for pdflatex... /usr/texbin/pdflatex
checking for makeindex... /usr/texbin/makeindex
checking for makeinfo... /usr/bin/makeinfo
checking whether makeinfo version is at least 4.7... yes
checking for ginstall-info... no
checking for install-info... /usr/bin/install-info
checking for texi2dvi... /usr/bin/texi2dvi
checking for kpsewhich... /usr/texbin/kpsewhich
checking for unzip... /usr/bin/unzip
checking for zip... /usr/bin/zip
checking for gzip... /usr/bin/gzip
checking for bzip2... /usr/bin/bzip2
checking for firefox... no
checking for mozilla... no
checking for galeon... no
checking for opera... no
checking for xdg-open... no
checking for kfmclient... no
checking for gnome-moz-remote... no
checking for open... /usr/bin/open
using default browser ... /usr/bin/open
checking for acroread... no
checking for acroread4... no
checking for xdg-open... no
checking for evince... no
checking for xpdf... no
checking for gv... no
checking for gnome-gv... no
checking for ggv... no
checking for okular... no
checking for kpdf... no
checking for open... /usr/bin/open
checking for notangle... false
checking for pkg-config... /usr/local/bin/pkg-config
checking for gcc... /usr/bin/clang
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether /usr/bin/clang accepts -g... yes
checking for /usr/bin/clang option to accept ISO C89... none needed
checking how to run the C preprocessor... /usr/bin/clang -E
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking whether /usr/bin/clang needs -traditional... no
checking how to run the C preprocessor... /usr/bin/clang -E
defining F77 to be /usr/local/bin/gfortran
checking whether we are using the GNU Fortran 77 compiler... no
checking whether /usr/local/bin/gfortran accepts -g... yes
checking whether we are using the GNU C++ compiler... yes
checking whether /usr/bin/clang++ accepts -g... yes
checking how to run the C++ preprocessor... /usr/bin/clang++ -E
checking whether __attribute__((visibility())) is supported... no
checking whether /usr/bin/clang accepts -fvisibility... yes
checking whether /usr/local/bin/gfortran accepts -fvisibility... no
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking minix/config.h usability... no
checking minix/config.h presence... no
checking for minix/config.h... no
checking whether it is safe to define __EXTENSIONS__... yes
checking whether we are using the GNU Objective C compiler... yes
checking whether /usr/bin/clang accepts -g... yes
checking for Objective C++ compiler... trying some possibilities
checking whether /usr/bin/clang++ can compile ObjC++... yes
/usr/bin/clang++
checking for a sed that does not truncate output... (cached) /usr/bin/sed
checking for fgrep... /usr/bin/grep -F
checking for ld used by /usr/bin/clang... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... no
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm
checking the name lister (/usr/bin/nm) interface... BSD nm
checking the maximum length of command line arguments... 196608
checking whether the shell understands some XSI constructs... yes
checking whether the shell understands "+="... yes
checking for /usr/bin/ld option to reload object files... -r
checking for objdump... no
checking how to recognize dependent libraries... pass_all
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm output from /usr/bin/clang object... ok
checking for dsymutil... dsymutil
checking for nmedit... nmedit
checking for lipo... lipo
checking for otool... otool
checking for otool64... no
checking for -single_module linker flag... yes
checking for -exported_symbols_list linker flag... yes
checking for dlfcn.h... yes
checking whether we are using the GNU C++ compiler... (cached) yes
checking whether /usr/bin/clang++ accepts -g... (cached) yes
checking how to run the C++ preprocessor... /usr/bin/clang++ -E
checking whether we are using the GNU Fortran 77 compiler... (cached) no
checking whether /usr/local/bin/gfortran accepts -g... (cached) yes
checking for objdir... .libs
checking if /usr/bin/clang supports -fno-rtti -fno-exceptions... yes
checking for /usr/bin/clang option to produce PIC... -fno-common -DPIC
checking if /usr/bin/clang PIC flag -fno-common -DPIC works... yes
checking if /usr/bin/clang static flag -static works... no
checking if /usr/bin/clang supports -c -o file.o... yes
checking if /usr/bin/clang supports -c -o file.o... (cached) yes
checking whether the /usr/bin/clang linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... darwin12.3.0 dyld
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for ld used by /usr/bin/clang++... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... no
checking whether the /usr/bin/clang++ linker (/usr/bin/ld) supports shared libraries... yes
checking for /usr/bin/clang++ option to produce PIC... -fno-common -DPIC
checking if /usr/bin/clang++ PIC flag -fno-common -DPIC works... yes
checking if /usr/bin/clang++ static flag -static works... no
checking if /usr/bin/clang++ supports -c -o file.o... yes
checking if /usr/bin/clang++ supports -c -o file.o... (cached) yes
checking whether the /usr/bin/clang++ linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... darwin12.3.0 dyld
checking how to hardcode library paths into programs... immediate
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for /usr/local/bin/gfortran option to produce PIC...
checking if /usr/local/bin/gfortran static flag works... no
checking if /usr/local/bin/gfortran supports -c -o file.o... no
checking if /usr/local/bin/gfortran supports -c -o file.o... (cached) no
checking whether the /usr/local/bin/gfortran linker (/usr/bin/ld) supports shared libraries... no
checking dynamic linker characteristics... darwin12.3.0 dyld
checking how to hardcode library paths into programs... immediate
checking for sin in -lm... yes
checking for library containing dlopen... none required
checking readline/history.h usability... yes
checking readline/history.h presence... yes
checking for readline/history.h... yes
checking readline/readline.h usability... yes
checking readline/readline.h presence... yes
checking for readline/readline.h... yes
checking for rl_callback_read_char in -lreadline... yes
checking for history_truncate_file... yes
checking whether rl_completion_matches exists and is declared... yes
checking for ANSI C header files... (cached) yes
checking for dirent.h that defines DIR... yes
checking for library containing opendir... none required
checking for sys/wait.h that is POSIX.1 compatible... yes
checking arpa/inet.h usability... yes
checking arpa/inet.h presence... yes
checking for arpa/inet.h... yes
checking dl.h usability... no
checking dl.h presence... no
checking for dl.h... no
checking for dlfcn.h... (cached) yes
checking elf.h usability... no
checking elf.h presence... no
checking for elf.h... no
checking fcntl.h usability... yes
checking fcntl.h presence... yes
checking for fcntl.h... yes
checking floatingpoint.h usability... no
checking floatingpoint.h presence... no
checking for floatingpoint.h... no
checking fpu_control.h usability... no
checking fpu_control.h presence... no
checking for fpu_control.h... no
checking glob.h usability... yes
checking glob.h presence... yes
checking for glob.h... yes
checking grp.h usability... yes
checking grp.h presence... yes
checking for grp.h... yes
checking netdb.h usability... yes
checking netdb.h presence... yes
checking for netdb.h... yes
checking netinet/in.h usability... yes
checking netinet/in.h presence... yes
checking for netinet/in.h... yes
checking pwd.h usability... yes
checking pwd.h presence... yes
checking for pwd.h... yes
checking for strings.h... (cached) yes
checking sys/param.h usability... yes
checking sys/param.h presence... yes
checking for sys/param.h... yes
checking sys/resource.h usability... yes
checking sys/resource.h presence... yes
checking for sys/resource.h... yes
checking sys/select.h usability... yes
checking sys/select.h presence... yes
checking for sys/select.h... yes
checking sys/socket.h usability... yes
checking sys/socket.h presence... yes
checking for sys/socket.h... yes
checking for sys/stat.h... (cached) yes
checking sys/time.h usability... yes
checking sys/time.h presence... yes
checking for sys/time.h... yes
checking sys/times.h usability... yes
checking sys/times.h presence... yes
checking for sys/times.h... yes
checking sys/utsname.h usability... yes
checking sys/utsname.h presence... yes
checking for sys/utsname.h... yes
checking for unistd.h... (cached) yes
checking utime.h usability... yes
checking utime.h presence... yes
checking for utime.h... yes
checking errno.h usability... yes
checking errno.h presence... yes
checking for errno.h... yes
checking for inttypes.h... (cached) yes
checking limits.h usability... yes
checking limits.h presence... yes
checking for limits.h... yes
checking locale.h usability... yes
checking locale.h presence... yes
checking for locale.h... yes
checking stdarg.h usability... yes
checking stdarg.h presence... yes
checking for stdarg.h... yes
checking stdbool.h usability... yes
checking stdbool.h presence... yes
checking for stdbool.h... yes
checking for stdint.h... (cached) yes
checking for string.h... (cached) yes
checking whether setjmp.h is POSIX.1 compatible... yes
checking whether sigsetjmp is declared... yes
checking whether siglongjmp is declared... yes
checking for GNU C library with version >= 2... no
checking return type of signal handlers... void
checking for uint64_t... yes
checking for pid_t... yes
checking for size_t... yes
checking whether SIZE_MAX is declared... yes
checking for blkcnt_t... yes
checking for type of socket length... socklen_t *
checking for stack_t... yes
checking for intptr_t... yes
checking for uintptr_t... yes
checking whether byte ordering is bigendian... no
checking for an ANSI C-conforming const... yes
checking for /usr/bin/clang option to accept ISO C99... none needed
checking for /usr/bin/clang option to accept ISO Standard C... (cached) none needed
checking for inline... inline
checking size of int... 4
checking size of long... 8
checking size of long long... 8
checking size of double... 8
checking size of long double... 16
checking size of size_t... 8
checking whether we can compute C Make dependencies... yes, using /usr/bin/clang -MM
checking whether /usr/bin/clang supports -c -o FILE.lo... yes
checking for /usr/bin/clang option to support OpenMP... unsupported
checking how to get verbose linking output from /usr/local/bin/gfortran... configure: WARNING: compilation failed
checking for Fortran 77 libraries of /usr/local/bin/gfortran...
checking how to get verbose linking output from /usr/bin/clang... -v
checking for C libraries of /usr/bin/clang... -L/usr/local/opt/readline/lib -L/usr/local/lib -L/opt/X11/lib -lSystem /usr/bin/../lib/clang/4.2/lib/darwin/libclang_rt.osx.a
checking for dummy main to link with Fortran 77 libraries... none
checking for Fortran 77 name-mangling scheme... configure: error: in `/private/tmp/r-x1li/R-2.15.3':
configure: error: cannot compile a simple Fortran program
See `config.log' for more details
==> Configuration
HOMEBREW_VERSION: 0.9.4
HEAD: 3730c0636fa344ad1e49697c3c5a8b867c62353a
CPU: quad-core 64-bit sandybridge
OS X: 10.8.3-x86_64
Xcode: 4.6.1
CLT: 4.6.0.0.1.1362189000
X11: 2.7.4 => /opt/X11
==> ENV
CC: /usr/bin/clang
CXX: /usr/bin/clang++ => /usr/bin/clang
CFLAGS: -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8
CXXFLAGS: -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8
CPPFLAGS: -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include
LDFLAGS: -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib
MAKEFLAGS: -j1
CMAKE_PREFIX_PATH: /usr/local/opt/readline:/opt/X11
CMAKE_INCLUDE_PATH: /opt/X11/include
CMAKE_FRAMEWORK_PATH: /usr/local/Frameworks
MACOSX_DEPLOYMENT_TARGET: 10.8
PKG_CONFIG_LIBDIR: /usr/local/lib/pkgconfig:/usr/local/share/pkgconfig:/usr/local/Library/ENV/pkgconfig/10.8:/usr/lib/pkgconfig:/opt/X11/lib/pkgconfig:/opt/X11/share/pkgconfig
HOMEBREW_MAKE_JOBS: 1
ACLOCAL_PATH: /opt/X11/share/aclocal
OBJC: /usr/bin/clang
PATH: /usr/texbin:/usr/local/lib/python2.7/site-packages:/usr/local/share/python:/usr/local/lib/python3.2/site-packages:/usr/local/share/python3:/usr/local/bin:/usr/local/sbin:/usr/bin:/bin:/usr/sbin:/sbin:/Users/Andres/.rvm/bin:/usr/local/Library/Contributions/cmd:/opt/X11/bin:/usr/local/bin:/usr/local/bin
Error: r did not build
Logs: /Users/Andres/Library/Logs/Homebrew/r/config.log
These open issues may also help:
https://github.com/mxcl/homebrew/pull/18943
https://github.com/mxcl/homebrew/issues/18841
https://github.com/mxcl/homebrew/issues/17414
https://github.com/mxcl/homebrew/issues/15990
https://github.com/mxcl/homebrew/issues/16373
https://github.com/mxcl/homebrew/pull/17022
https://github.com/mxcl/homebrew/issues/16303
This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake.
It was created by R configure 2.15.3, which was
generated by GNU Autoconf 2.69. Invocation command line was
$ ./configure --prefix=/usr/local/Cellar/r/2.15.3 --with-aqua --enable-R-framework --with-lapack
## --------- ##
## Platform. ##
## --------- ##
hostname = hnt-up-dhcp-109-007.wharton.upenn.edu
uname -m = x86_64
uname -r = 12.3.0
uname -s = Darwin
uname -v = Darwin Kernel Version 12.3.0: Sun Jan 6 22:37:10 PST 2013; root:xnu-2050.22.13~1/RELEASE_X86_64
/usr/bin/uname -p = i386
/bin/uname -X = unknown
/bin/arch = unknown
/usr/bin/arch -k = unknown
/usr/convex/getsysinfo = unknown
/usr/bin/hostinfo = Mach kernel version:
Darwin Kernel Version 12.3.0: Sun Jan 6 22:37:10 PST 2013; root:xnu-2050.22.13~1/RELEASE_X86_64
Kernel configured for up to 4 processors.
2 processors are physically available.
4 processors are logically available.
Processor type: i486 (Intel 80486)
Processors active: 0 1 2 3
Primary memory available: 4.00 gigabytes
Default processor set: 179 tasks, 1079 threads, 4 processors
Load average: 2.33, Mach factor: 2.54
/bin/machine = unknown
/usr/bin/oslevel = unknown
/bin/universe = unknown
PATH: /usr/local/Library/ENV/4.3
PATH: /usr/local/opt/libtiff/bin
PATH: /usr/local/opt/jpeg/bin
PATH: /usr/local/opt/python/bin
PATH: /opt/X11/bin
PATH: /usr/bin
PATH: /bin
PATH: /usr/sbin
PATH: /sbin
PATH: /usr/local/bin
PATH: /usr/local/bin
## ----------- ##
## Core tests. ##
## ----------- ##
configure:3636: checking build system type
configure:3650: result: x86_64-apple-darwin12.3.0
configure:3670: checking host system type
configure:3683: result: x86_64-apple-darwin12.3.0
configure:4385: checking for pwd
configure:4403: found /bin/pwd
configure:4416: result: /bin/pwd
configure:4424: checking whether builddir is srcdir
configure:4432: result: yes
configure:4437: checking for working aclocal
configure:4441: result: found
configure:4450: checking for working autoconf
configure:4454: result: found
configure:4463: checking for working automake
configure:4467: result: found
configure:4476: checking for working autoheader
configure:4480: result: found
configure:4493: checking for gawk
configure:4509: found /usr/local/bin/gawk
configure:4520: result: gawk
configure:4531: checking whether ln -s works
configure:4535: result: yes
configure:4546: checking for bison
configure:4562: found /usr/bin/bison
configure:4573: result: bison -y
configure:4589: checking for ar
configure:4605: found /usr/bin/ar
configure:4616: result: ar
configure:4644: checking for a BSD-compatible install
configure:4712: result: /usr/bin/install -c
configure:4747: checking for sed
configure:4766: found /usr/local/Library/ENV/4.3/sed
configure:4778: result: /usr/local/Library/ENV/4.3/sed
configure:4796: checking for which
configure:4814: found /usr/bin/which
configure:4826: result: /usr/bin/which
configure:4846: checking for less
configure:4864: found /usr/bin/less
configure:4876: result: /usr/bin/less
configure:4899: checking for gtar
configure:4932: result: no
configure:4899: checking for gnutar
configure:4917: found /usr/bin/gnutar
configure:4929: result: /usr/bin/gnutar
configure:4951: checking for tex
configure:4984: result: no
configure:4996: checking for pdftex
configure:5029: result: no
configure:5039: WARNING: you cannot build PDF versions of the R manuals
configure:5046: checking for pdflatex
configure:5079: result: no
configure:5089: WARNING: you cannot build PDF versions of vignettes and help pages
configure:5096: checking for makeindex
configure:5129: result: no
configure:5141: checking for makeinfo
configure:5159: found /usr/bin/makeinfo
configure:5171: result: /usr/bin/makeinfo
configure:5183: checking whether makeinfo version is at least 4.7
configure:5203: result: yes
configure:5210: checking for ginstall-info
configure:5243: result: no
configure:5210: checking for install-info
configure:5228: found /usr/bin/install-info
configure:5240: result: /usr/bin/install-info
configure:5272: checking for texi2dvi
configure:5290: found /usr/bin/texi2dvi
configure:5302: result: /usr/bin/texi2dvi
configure:5322: checking for kpsewhich
configure:5355: result: no
configure:5383: checking for unzip
configure:5401: found /usr/bin/unzip
configure:5413: result: /usr/bin/unzip
configure:5429: checking for zip
configure:5447: found /usr/bin/zip
configure:5459: result: /usr/bin/zip
configure:5475: checking for gzip
configure:5493: found /usr/bin/gzip
configure:5505: result: /usr/bin/gzip
configure:5521: checking for bzip2
configure:5539: found /usr/bin/bzip2
configure:5551: result: /usr/bin/bzip2
configure:5569: checking for firefox
configure:5602: result: no
configure:5569: checking for mozilla
configure:5602: result: no
configure:5569: checking for galeon
configure:5602: result: no
configure:5569: checking for opera
configure:5602: result: no
configure:5569: checking for xdg-open
configure:5602: result: no
configure:5569: checking for kfmclient
configure:5602: result: no
configure:5569: checking for gnome-moz-remote
configure:5602: result: no
configure:5569: checking for open
configure:5587: found /usr/bin/open
configure:5599: result: /usr/bin/open
configure:5616: result: using default browser ... /usr/bin/open
configure:5626: checking for acroread
configure:5659: result: no
configure:5626: checking for acroread4
configure:5659: result: no
configure:5626: checking for xdg-open
configure:5659: result: no
configure:5626: checking for evince
configure:5659: result: no
configure:5626: checking for xpdf
configure:5659: result: no
configure:5626: checking for gv
configure:5659: result: no
configure:5626: checking for gnome-gv
configure:5659: result: no
configure:5626: checking for ggv
configure:5659: result: no
configure:5626: checking for okular
configure:5659: result: no
configure:5626: checking for kpdf
configure:5659: result: no
configure:5626: checking for open
configure:5644: found /usr/bin/open
configure:5656: result: /usr/bin/open
configure:5677: checking for notangle
configure:5708: result: false
configure:5720: checking for pkg-config
configure:5739: found /usr/local/bin/pkg-config
configure:5751: result: /usr/local/bin/pkg-config
configure:5808: checking for gcc
configure:5835: result: cc
configure:6064: checking for C compiler version
configure:6073: cc --version >&5
Apple LLVM version 4.2 (clang-425.0.27) (based on LLVM 3.2svn)
Target: x86_64-apple-darwin12.3.0
Thread model: posix
configure:6084: $? = 0
configure:6073: cc -v >&5
Apple LLVM version 4.2 (clang-425.0.27) (based on LLVM 3.2svn)
Target: x86_64-apple-darwin12.3.0
Thread model: posix
clang: warning: argument unused during compilation: '-isystem /usr/local/include'
clang: warning: argument unused during compilation: '-isystem /opt/X11/include/freetype2'
clang: warning: argument unused during compilation: '-isystem /usr/include/libxml2'
clang: warning: argument unused during compilation: '-isystem /opt/X11/include'
clang: warning: argument unused during compilation: '-I /usr/local/opt/readline/include'
clang: warning: argument unused during compilation: '-L/usr/local/opt/readline/lib'
clang: warning: argument unused during compilation: '-L/usr/local/lib'
... rest of stderr output deleted ...
configure:6084: $? = 0
configure:6073: cc -V >&5
clang: error: unsupported option '-V -isystem/usr/local/include'
clang: error: no input files
configure:6084: $? = 1
configure:6073: cc -qversion >&5
clang: error: no input files
configure:6084: $? = 1
configure:6104: checking whether the C compiler works
configure:6126: cc -I/usr/local/include -L/usr/local/lib conftest.c >&5
configure:6130: $? = 0
configure:6178: result: yes
configure:6181: checking for C compiler default output file name
configure:6183: result: a.out
configure:6189: checking for suffix of executables
configure:6196: cc -o conftest -I/usr/local/include -L/usr/local/lib conftest.c >&5
configure:6200: $? = 0
configure:6222: result:
configure:6244: checking whether we are cross compiling
configure:6252: cc -o conftest -I/usr/local/include -L/usr/local/lib conftest.c >&5
configure:6256: $? = 0
configure:6263: ./conftest
configure:6267: $? = 0
configure:6282: result: no
configure:6287: checking for suffix of object files
configure:6309: cc -c -I/usr/local/include conftest.c >&5
configure:6313: $? = 0
configure:6334: result: o
configure:6338: checking whether we are using the GNU C compiler
configure:6357: cc -c -I/usr/local/include conftest.c >&5
configure:6357: $? = 0
configure:6366: result: yes
configure:6375: checking whether cc accepts -g
configure:6395: cc -c -g -I/usr/local/include conftest.c >&5
configure:6395: $? = 0
configure:6436: result: yes
configure:6453: checking for cc option to accept ISO C89
configure:6516: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:6516: $? = 0
configure:6529: result: none needed
configure:6556: checking how to run the C preprocessor
configure:6587: cc -E -I/usr/local/include conftest.c
configure:6587: $? = 0
configure:6601: cc -E -I/usr/local/include conftest.c
conftest.c:17:10: fatal error: 'ac_nonexistent.h' file not found
#include <ac_nonexistent.h>
^
1 error generated.
configure:6601: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:6626: result: cc -E
configure:6646: cc -E -I/usr/local/include conftest.c
configure:6646: $? = 0
configure:6660: cc -E -I/usr/local/include conftest.c
conftest.c:17:10: fatal error: 'ac_nonexistent.h' file not found
#include <ac_nonexistent.h>
^
1 error generated.
configure:6660: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:6689: checking for grep that handles long lines and -e
configure:6747: result: /usr/bin/grep
configure:6752: checking for egrep
configure:6814: result: /usr/bin/grep -E
configure:6820: checking whether cc needs -traditional
conftest.c:17:10: fatal error: 'termio.h' file not found
#include <termio.h>
^
1 error generated.
configure:6854: result: no
configure:6866: checking how to run the C preprocessor
configure:6936: result: cc -E
configure:6956: cc -E -I/usr/local/include conftest.c
configure:6956: $? = 0
configure:6970: cc -E -I/usr/local/include conftest.c
conftest.c:17:10: fatal error: 'ac_nonexistent.h' file not found
#include <ac_nonexistent.h>
^
1 error generated.
configure:6970: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:7042: result: defining F77 to be /usr/bin/gfortran
configure:7214: checking for Fortran 77 compiler version
configure:7223: /usr/bin/gfortran --version >&5
GNU Fortran (GCC) 4.2.1 (Apple Inc. build 5666) (dot 3)
Copyright (C) 2007 Free Software Foundation, Inc.
GNU Fortran comes with NO WARRANTY, to the extent permitted by law.
You may redistribute copies of GNU Fortran
under the terms of the GNU General Public License.
For more information about these matters, see the file named COPYING
configure:7234: $? = 0
configure:7223: /usr/bin/gfortran -v >&5
Using built-in specs.
Target: i686-apple-darwin11
Configured with: /Volumes/Media/Builds/gcc-5666.3/build/obj/src/configure --disable-checking --prefix=/usr --mandir=/share/man --enable-languages=c,objc,c++,obj-c++,fortran --program-transform-name=/^[cg][^.-]*$/s/$/-4.2/ --with-slibdir=/usr/lib --build=i686-apple-darwin11 --program-prefix=i686-apple-darwin11- --host=x86_64-apple-darwin11 --target=i686-apple-darwin11 --with-gxx-include-dir=/include/c++/4.2.1
Thread model: posix
gcc version 4.2.1 (Apple Inc. build 5666) (dot 3)
configure:7234: $? = 0
configure:7223: /usr/bin/gfortran -V >&5
gfortran-4.2: argument to `-V' is missing
configure:7234: $? = 1
configure:7223: /usr/bin/gfortran -qversion >&5
i686-apple-darwin11-gfortran-4.2.1: no input files
configure:7234: $? = 1
configure:7243: checking whether we are using the GNU Fortran 77 compiler
configure:7256: /usr/bin/gfortran -c conftest.F >&5
configure:7256: $? = 0
configure:7265: result: yes
configure:7271: checking whether /usr/bin/gfortran accepts -g
configure:7282: /usr/bin/gfortran -c -g conftest.f >&5
configure:7282: $? = 0
configure:7290: result: yes
configure:7435: checking for C++ compiler version
configure:7444: c++ --version >&5
Apple LLVM version 4.2 (clang-425.0.27) (based on LLVM 3.2svn)
Target: x86_64-apple-darwin12.3.0
Thread model: posix
configure:7455: $? = 0
configure:7444: c++ -v >&5
Apple LLVM version 4.2 (clang-425.0.27) (based on LLVM 3.2svn)
Target: x86_64-apple-darwin12.3.0
Thread model: posix
clang: warning: argument unused during compilation: '-isystem /usr/local/include'
clang: warning: argument unused during compilation: '-isystem /opt/X11/include/freetype2'
clang: warning: argument unused during compilation: '-isystem /usr/include/libxml2'
clang: warning: argument unused during compilation: '-isystem /opt/X11/include'
clang: warning: argument unused during compilation: '-I /usr/local/opt/readline/include'
clang: warning: argument unused during compilation: '-L/usr/local/opt/readline/lib'
clang: warning: argument unused during compilation: '-L/usr/local/lib'
... rest of stderr output deleted ...
configure:7455: $? = 0
configure:7444: c++ -V >&5
clang: error: unsupported option '-V -isystem/usr/local/include'
clang: error: no input files
configure:7455: $? = 1
configure:7444: c++ -qversion >&5
clang: error: no input files
configure:7455: $? = 1
configure:7459: checking whether we are using the GNU C++ compiler
configure:7478: c++ -c -I/usr/local/include conftest.cpp >&5
configure:7478: $? = 0
configure:7487: result: yes
configure:7496: checking whether c++ accepts -g
configure:7516: c++ -c -g -I/usr/local/include conftest.cpp >&5
configure:7516: $? = 0
configure:7557: result: yes
configure:7585: checking how to run the C++ preprocessor
configure:7612: c++ -E -I/usr/local/include conftest.cpp
configure:7612: $? = 0
configure:7626: c++ -E -I/usr/local/include conftest.cpp
conftest.cpp:17:10: fatal error: 'ac_nonexistent.h' file not found
#include <ac_nonexistent.h>
^
1 error generated.
configure:7626: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:7651: result: c++ -E
configure:7671: c++ -E -I/usr/local/include conftest.cpp
configure:7671: $? = 0
configure:7685: c++ -E -I/usr/local/include conftest.cpp
conftest.cpp:17:10: fatal error: 'ac_nonexistent.h' file not found
#include <ac_nonexistent.h>
^
1 error generated.
configure:7685: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:7713: checking whether __attribute__((visibility())) is supported
configure:7724: cc -Werror -S conftest.c -o conftest.s 1>&5
clang: error: argument unused during compilation: '-L/usr/local/opt/readline/lib'
clang: error: argument unused during compilation: '-L/usr/local/lib'
clang: error: argument unused during compilation: '-L/opt/X11/lib'
configure:7727: $? = 1
configure:7736: result: no
configure:7747: checking whether cc accepts -fvisibility
configure:7763: cc -c -g -O2 -fvisibility=hidden -I/usr/local/include conftest.c >&5
configure:7763: $? = 0
configure:7770: result: yes
configure:7795: checking whether /usr/bin/gfortran accepts -fvisibility
configure:7805: /usr/bin/gfortran -c -fvisibility=hidden conftest.f >&5
configure:7805: $? = 0
configure:7812: result: yes
configure:7835: checking for ANSI C header files
configure:7855: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:7855: $? = 0
configure:7928: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.c >&5
configure:7928: $? = 0
configure:7928: ./conftest
configure:7928: $? = 0
configure:7939: result: yes
configure:7952: checking for sys/types.h
configure:7952: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:7952: $? = 0
configure:7952: result: yes
configure:7952: checking for sys/stat.h
configure:7952: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:7952: $? = 0
configure:7952: result: yes
configure:7952: checking for stdlib.h
configure:7952: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:7952: $? = 0
configure:7952: result: yes
configure:7952: checking for string.h
configure:7952: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:7952: $? = 0
configure:7952: result: yes
configure:7952: checking for memory.h
configure:7952: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:7952: $? = 0
configure:7952: result: yes
configure:7952: checking for strings.h
configure:7952: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:7952: $? = 0
configure:7952: result: yes
configure:7952: checking for inttypes.h
configure:7952: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:7952: $? = 0
configure:7952: result: yes
configure:7952: checking for stdint.h
configure:7952: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:7952: $? = 0
configure:7952: result: yes
configure:7952: checking for unistd.h
configure:7952: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:7952: $? = 0
configure:7952: result: yes
configure:7965: checking minix/config.h usability
configure:7965: cc -c -g -O2 -I/usr/local/include conftest.c >&5
conftest.c:60:10: fatal error: 'minix/config.h' file not found
#include <minix/config.h>
^
1 error generated.
configure:7965: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <minix/config.h>
configure:7965: result: no
configure:7965: checking minix/config.h presence
configure:7965: cc -E -I/usr/local/include conftest.c
conftest.c:27:10: fatal error: 'minix/config.h' file not found
#include <minix/config.h>
^
1 error generated.
configure:7965: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| /* end confdefs.h. */
| #include <minix/config.h>
configure:7965: result: no
configure:7965: checking for minix/config.h
configure:7965: result: no
configure:7986: checking whether it is safe to define __EXTENSIONS__
configure:8004: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:8004: $? = 0
configure:8011: result: yes
configure:8133: checking for Objective C compiler version
configure:8142: cc --version >&5
Apple LLVM version 4.2 (clang-425.0.27) (based on LLVM 3.2svn)
Target: x86_64-apple-darwin12.3.0
Thread model: posix
configure:8153: $? = 0
configure:8142: cc -v >&5
Apple LLVM version 4.2 (clang-425.0.27) (based on LLVM 3.2svn)
Target: x86_64-apple-darwin12.3.0
Thread model: posix
clang: warning: argument unused during compilation: '-isystem /usr/local/include'
clang: warning: argument unused during compilation: '-isystem /opt/X11/include/freetype2'
clang: warning: argument unused during compilation: '-isystem /usr/include/libxml2'
clang: warning: argument unused during compilation: '-isystem /opt/X11/include'
clang: warning: argument unused during compilation: '-I /usr/local/opt/readline/include'
clang: warning: argument unused during compilation: '-L/usr/local/opt/readline/lib'
clang: warning: argument unused during compilation: '-L/usr/local/lib'
... rest of stderr output deleted ...
configure:8153: $? = 0
configure:8142: cc -V >&5
clang: error: unsupported option '-V -isystem/usr/local/include'
clang: error: no input files
configure:8153: $? = 1
configure:8142: cc -qversion >&5
clang: error: no input files
configure:8153: $? = 1
configure:8157: checking whether we are using the GNU Objective C compiler
configure:8176: cc -c -I/usr/local/include conftest.m >&5
configure:8176: $? = 0
configure:8185: result: yes
configure:8194: checking whether cc accepts -g
configure:8214: cc -c -g -I/usr/local/include conftest.m >&5
configure:8214: $? = 0
configure:8255: result: yes
configure:8314: checking for Objective C++ compiler
configure:8320: result: trying some possibilities
configure:8323: checking whether c++ can compile ObjC++
running: c++ -c conftest.mm -I/usr/local/include
configure:8351: result: yes
configure:8455: result: c++
configure:8524: checking for a sed that does not truncate output
configure:8588: result: /usr/local/Library/ENV/4.3/sed
configure:8606: checking for fgrep
configure:8668: result: /usr/bin/grep -F
configure:8696: checking for ld used by cc
configure:8763: result: /usr/bin/ld
configure:8770: checking if the linker (/usr/bin/ld) is GNU ld
configure:8785: result: no
configure:8797: checking for BSD- or MS-compatible name lister (nm)
configure:8846: result: /usr/bin/nm
configure:8964: checking the name lister (/usr/bin/nm) interface
configure:8971: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:8974: /usr/bin/nm "conftest.o"
configure:8977: output
0000000000000204 S _some_variable
configure:8984: result: BSD nm
configure:8988: checking the maximum length of command line arguments
configure:9108: result: 196608
configure:9125: checking whether the shell understands some XSI constructs
configure:9135: result: yes
configure:9139: checking whether the shell understands "+="
configure:9145: result: yes
configure:9180: checking for /usr/bin/ld option to reload object files
configure:9187: result: -r
configure:9256: checking for objdump
configure:9286: result: no
configure:9315: checking how to recognize dependent libraries
configure:9511: result: pass_all
configure:9676: checking for strip
configure:9692: found /usr/bin/strip
configure:9703: result: strip
configure:9775: checking for ranlib
configure:9791: found /usr/bin/ranlib
configure:9802: result: ranlib
configure:9892: checking command to parse /usr/bin/nm output from cc object
configure:10010: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:10013: $? = 0
configure:10017: /usr/bin/nm conftest.o \| sed -n -e 's/^.*[ ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' \> conftest.nm
configure:10020: $? = 0
cannot find nm_test_var in conftest.nm
configure:10010: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:10013: $? = 0
configure:10017: /usr/bin/nm conftest.o \| sed -n -e 's/^.*[ ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*_\([_A-Za-z][_A-Za-z0-9]*\)$/\1 _\2 \2/p' \> conftest.nm
configure:10020: $? = 0
configure:10074: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.c conftstm.o >&5
configure:10077: $? = 0
configure:10115: result: ok
configure:10186: checking for dsymutil
configure:10202: found /usr/bin/dsymutil
configure:10213: result: dsymutil
configure:10278: checking for nmedit
configure:10294: found /usr/bin/nmedit
configure:10305: result: nmedit
configure:10370: checking for lipo
configure:10386: found /usr/bin/lipo
configure:10397: result: lipo
configure:10462: checking for otool
configure:10478: found /usr/bin/otool
configure:10489: result: otool
configure:10554: checking for otool64
configure:10584: result: no
configure:10629: checking for -single_module linker flag
cc -g -O2 -L/usr/local/lib -o libconftest.dylib -dynamiclib -Wl,-single_module conftest.c
configure:10656: result: yes
configure:10658: checking for -exported_symbols_list linker flag
configure:10678: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib -Wl,-exported_symbols_list,conftest.sym conftest.c >&5
configure:10678: $? = 0
configure:10688: result: yes
configure:10727: checking for dlfcn.h
configure:10727: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:10727: $? = 0
configure:10727: result: yes
configure:10852: checking for C++ compiler version
configure:10861: c++ --version >&5
Apple LLVM version 4.2 (clang-425.0.27) (based on LLVM 3.2svn)
Target: x86_64-apple-darwin12.3.0
Thread model: posix
configure:10872: $? = 0
configure:10861: c++ -v >&5
Apple LLVM version 4.2 (clang-425.0.27) (based on LLVM 3.2svn)
Target: x86_64-apple-darwin12.3.0
Thread model: posix
clang: warning: argument unused during compilation: '-isystem /usr/local/include'
clang: warning: argument unused during compilation: '-isystem /opt/X11/include/freetype2'
clang: warning: argument unused during compilation: '-isystem /usr/include/libxml2'
clang: warning: argument unused during compilation: '-isystem /opt/X11/include'
clang: warning: argument unused during compilation: '-I /usr/local/opt/readline/include'
clang: warning: argument unused during compilation: '-L/usr/local/opt/readline/lib'
clang: warning: argument unused during compilation: '-L/usr/local/lib'
... rest of stderr output deleted ...
configure:10872: $? = 0
configure:10861: c++ -V >&5
clang: error: unsupported option '-V -isystem/usr/local/include'
clang: error: no input files
configure:10872: $? = 1
configure:10861: c++ -qversion >&5
clang: error: no input files
configure:10872: $? = 1
configure:10876: checking whether we are using the GNU C++ compiler
configure:10904: result: yes
configure:10913: checking whether c++ accepts -g
configure:10974: result: yes
configure:11005: checking how to run the C++ preprocessor
configure:11071: result: c++ -E
configure:11091: c++ -E -I/usr/local/include conftest.cpp
configure:11091: $? = 0
configure:11105: c++ -E -I/usr/local/include conftest.cpp
conftest.cpp:33:10: fatal error: 'ac_nonexistent.h' file not found
#include <ac_nonexistent.h>
^
1 error generated.
configure:11105: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:11246: checking for Fortran 77 compiler version
configure:11255: /usr/bin/gfortran --version >&5
GNU Fortran (GCC) 4.2.1 (Apple Inc. build 5666) (dot 3)
Copyright (C) 2007 Free Software Foundation, Inc.
GNU Fortran comes with NO WARRANTY, to the extent permitted by law.
You may redistribute copies of GNU Fortran
under the terms of the GNU General Public License.
For more information about these matters, see the file named COPYING
configure:11266: $? = 0
configure:11255: /usr/bin/gfortran -v >&5
Using built-in specs.
Target: i686-apple-darwin11
Configured with: /Volumes/Media/Builds/gcc-5666.3/build/obj/src/configure --disable-checking --prefix=/usr --mandir=/share/man --enable-languages=c,objc,c++,obj-c++,fortran --program-transform-name=/^[cg][^.-]*$/s/$/-4.2/ --with-slibdir=/usr/lib --build=i686-apple-darwin11 --program-prefix=i686-apple-darwin11- --host=x86_64-apple-darwin11 --target=i686-apple-darwin11 --with-gxx-include-dir=/include/c++/4.2.1
Thread model: posix
gcc version 4.2.1 (Apple Inc. build 5666) (dot 3)
configure:11266: $? = 0
configure:11255: /usr/bin/gfortran -V >&5
gfortran-4.2: argument to `-V' is missing
configure:11266: $? = 1
configure:11255: /usr/bin/gfortran -qversion >&5
i686-apple-darwin11-gfortran-4.2.1: no input files
configure:11266: $? = 1
configure:11275: checking whether we are using the GNU Fortran 77 compiler
configure:11297: result: yes
configure:11303: checking whether /usr/bin/gfortran accepts -g
configure:11322: result: yes
configure:11500: checking for objdir
configure:11515: result: .libs
configure:11811: checking if cc supports -fno-rtti -fno-exceptions
configure:11829: cc -c -g -O2 -I/usr/local/include -fno-rtti -fno-exceptions conftest.c >&5
configure:11833: $? = 0
configure:11846: result: yes
configure:11866: checking for cc option to produce PIC
configure:12138: result: -fno-common -DPIC
configure:12150: checking if cc PIC flag -fno-common -DPIC works
configure:12168: cc -c -g -O2 -I/usr/local/include -fno-common -DPIC -DPIC conftest.c >&5
configure:12172: $? = 0
configure:12185: result: yes
configure:12209: checking if cc static flag -static works
configure:12237: result: no
configure:12252: checking if cc supports -c -o file.o
configure:12273: cc -c -g -O2 -I/usr/local/include -o out/conftest2.o conftest.c >&5
configure:12277: $? = 0
configure:12299: result: yes
configure:12307: checking if cc supports -c -o file.o
configure:12354: result: yes
configure:12387: checking whether the cc linker (/usr/bin/ld) supports shared libraries
configure:13373: result: yes
configure:13612: checking dynamic linker characteristics
configure:14263: result: darwin12.3.0 dyld
configure:14365: checking how to hardcode library paths into programs
configure:14390: result: immediate
configure:14910: checking whether stripping libraries is possible
configure:14924: result: yes
configure:14950: checking if libtool supports shared libraries
configure:14952: result: yes
configure:14955: checking whether to build shared libraries
configure:14976: result: yes
configure:14979: checking whether to build static libraries
configure:14983: result: no
configure:15126: checking for ld used by c++
configure:15193: result: /usr/bin/ld
configure:15200: checking if the linker (/usr/bin/ld) is GNU ld
configure:15215: result: no
configure:15270: checking whether the c++ linker (/usr/bin/ld) supports shared libraries
configure:16183: result: yes
configure:16211: c++ -c -g -O2 -I/usr/local/include conftest.cpp >&5
configure:16214: $? = 0
configure:16396: checking for c++ option to produce PIC
configure:16713: result: -fno-common -DPIC
configure:16722: checking if c++ PIC flag -fno-common -DPIC works
configure:16740: c++ -c -g -O2 -I/usr/local/include -fno-common -DPIC -DPIC conftest.cpp >&5
configure:16744: $? = 0
configure:16757: result: yes
configure:16778: checking if c++ static flag -static works
configure:16806: result: no
configure:16818: checking if c++ supports -c -o file.o
configure:16839: c++ -c -g -O2 -I/usr/local/include -o out/conftest2.o conftest.cpp >&5
configure:16843: $? = 0
configure:16865: result: yes
configure:16870: checking if c++ supports -c -o file.o
configure:16917: result: yes
configure:16947: checking whether the c++ linker (/usr/bin/ld) supports shared libraries
configure:16973: result: yes
configure:17110: checking dynamic linker characteristics
configure:17709: result: darwin12.3.0 dyld
configure:17760: checking how to hardcode library paths into programs
configure:17785: result: immediate
configure:17926: checking if libtool supports shared libraries
configure:17928: result: yes
configure:17931: checking whether to build shared libraries
configure:17951: result: yes
configure:17954: checking whether to build static libraries
configure:17958: result: no
configure:17972: checking for /usr/bin/gfortran option to produce PIC
configure:18244: result: -fno-common
configure:18253: checking if /usr/bin/gfortran PIC flag -fno-common works
configure:18271: /usr/bin/gfortran -c -fno-common conftest.f >&5
configure:18275: $? = 0
configure:18288: result: yes
configure:18309: checking if /usr/bin/gfortran static flag -static works
configure:18337: result: no
configure:18349: checking if /usr/bin/gfortran supports -c -o file.o
configure:18370: /usr/bin/gfortran -c -o out/conftest2.o conftest.f >&5
configure:18374: $? = 0
configure:18396: result: yes
configure:18401: checking if /usr/bin/gfortran supports -c -o file.o
configure:18448: result: yes
configure:18478: checking whether the /usr/bin/gfortran linker (/usr/bin/ld) supports shared libraries
configure:19451: result: yes
configure:19588: checking dynamic linker characteristics
configure:20181: result: darwin12.3.0 dyld
configure:20232: checking how to hardcode library paths into programs
configure:20257: result: immediate
configure:20551: checking for sin in -lm
configure:20576: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
conftest.c:41:6: warning: incompatible redeclaration of library function 'sin'
char sin ();
^
conftest.c:41:6: note: 'sin' is a builtin with type 'double (double)'
1 warning generated.
configure:20576: $? = 0
configure:20585: result: yes
configure:20599: checking for library containing dlopen
configure:20630: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:20630: $? = 0
configure:20647: result: none required
configure:20760: checking readline/history.h usability
configure:20760: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:20760: $? = 0
configure:20760: result: yes
configure:20760: checking readline/history.h presence
configure:20760: cc -E -I/usr/local/include conftest.c
configure:20760: $? = 0
configure:20760: result: yes
configure:20760: checking for readline/history.h
configure:20760: result: yes
configure:20760: checking readline/readline.h usability
configure:20760: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:20760: $? = 0
configure:20760: result: yes
configure:20760: checking readline/readline.h presence
configure:20760: cc -E -I/usr/local/include conftest.c
configure:20760: $? = 0
configure:20760: result: yes
configure:20760: checking for readline/readline.h
configure:20760: result: yes
configure:20774: checking for rl_callback_read_char in -lreadline
configure:20799: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.c -lreadline >&5
configure:20799: $? = 0
configure:20808: result: yes
configure:20992: checking for history_truncate_file
configure:20992: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.c -lreadline >&5
configure:20992: $? = 0
configure:20992: result: yes
configure:21007: checking whether rl_completion_matches exists and is declared
configure:21029: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.c -lreadline >&5
configure:21029: $? = 0
configure:21038: result: yes
configure:21056: checking for ANSI C header files
configure:21160: result: yes
configure:21171: checking for dirent.h that defines DIR
configure:21190: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21190: $? = 0
configure:21198: result: yes
configure:21211: checking for library containing opendir
configure:21242: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:21242: $? = 0
configure:21259: result: none required
configure:21330: checking for sys/wait.h that is POSIX.1 compatible
configure:21356: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21356: $? = 0
configure:21363: result: yes
configure:21389: checking arpa/inet.h usability
configure:21389: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking arpa/inet.h presence
configure:21389: cc -E -I/usr/local/include conftest.c
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking for arpa/inet.h
configure:21389: result: yes
configure:21389: checking dl.h usability
configure:21389: cc -c -g -O2 -I/usr/local/include conftest.c >&5
conftest.c:77:10: fatal error: 'dl.h' file not found
#include <dl.h>
^
1 error generated.
configure:21389: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <dl.h>
configure:21389: result: no
configure:21389: checking dl.h presence
configure:21389: cc -E -I/usr/local/include conftest.c
conftest.c:44:10: fatal error: 'dl.h' file not found
#include <dl.h>
^
1 error generated.
configure:21389: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| /* end confdefs.h. */
| #include <dl.h>
configure:21389: result: no
configure:21389: checking for dl.h
configure:21389: result: no
configure:21389: checking for dlfcn.h
configure:21389: result: yes
configure:21389: checking elf.h usability
configure:21389: cc -c -g -O2 -I/usr/local/include conftest.c >&5
conftest.c:78:10: fatal error: 'elf.h' file not found
#include <elf.h>
^
1 error generated.
configure:21389: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <elf.h>
configure:21389: result: no
configure:21389: checking elf.h presence
configure:21389: cc -E -I/usr/local/include conftest.c
conftest.c:45:10: fatal error: 'elf.h' file not found
#include <elf.h>
^
1 error generated.
configure:21389: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| /* end confdefs.h. */
| #include <elf.h>
configure:21389: result: no
configure:21389: checking for elf.h
configure:21389: result: no
configure:21389: checking fcntl.h usability
configure:21389: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking fcntl.h presence
configure:21389: cc -E -I/usr/local/include conftest.c
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking for fcntl.h
configure:21389: result: yes
configure:21389: checking floatingpoint.h usability
configure:21389: cc -c -g -O2 -I/usr/local/include conftest.c >&5
conftest.c:79:10: fatal error: 'floatingpoint.h' file not found
#include <floatingpoint.h>
^
1 error generated.
configure:21389: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <floatingpoint.h>
configure:21389: result: no
configure:21389: checking floatingpoint.h presence
configure:21389: cc -E -I/usr/local/include conftest.c
conftest.c:46:10: fatal error: 'floatingpoint.h' file not found
#include <floatingpoint.h>
^
1 error generated.
configure:21389: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| /* end confdefs.h. */
| #include <floatingpoint.h>
configure:21389: result: no
configure:21389: checking for floatingpoint.h
configure:21389: result: no
configure:21389: checking fpu_control.h usability
configure:21389: cc -c -g -O2 -I/usr/local/include conftest.c >&5
conftest.c:79:10: fatal error: 'fpu_control.h' file not found
#include <fpu_control.h>
^
1 error generated.
configure:21389: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <fpu_control.h>
configure:21389: result: no
configure:21389: checking fpu_control.h presence
configure:21389: cc -E -I/usr/local/include conftest.c
conftest.c:46:10: fatal error: 'fpu_control.h' file not found
#include <fpu_control.h>
^
1 error generated.
configure:21389: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| /* end confdefs.h. */
| #include <fpu_control.h>
configure:21389: result: no
configure:21389: checking for fpu_control.h
configure:21389: result: no
configure:21389: checking glob.h usability
configure:21389: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking glob.h presence
configure:21389: cc -E -I/usr/local/include conftest.c
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking for glob.h
configure:21389: result: yes
configure:21389: checking grp.h usability
configure:21389: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking grp.h presence
configure:21389: cc -E -I/usr/local/include conftest.c
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking for grp.h
configure:21389: result: yes
configure:21389: checking netdb.h usability
configure:21389: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking netdb.h presence
configure:21389: cc -E -I/usr/local/include conftest.c
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking for netdb.h
configure:21389: result: yes
configure:21389: checking netinet/in.h usability
configure:21389: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking netinet/in.h presence
configure:21389: cc -E -I/usr/local/include conftest.c
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking for netinet/in.h
configure:21389: result: yes
configure:21389: checking pwd.h usability
configure:21389: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking pwd.h presence
configure:21389: cc -E -I/usr/local/include conftest.c
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking for pwd.h
configure:21389: result: yes
configure:21389: checking for strings.h
configure:21389: result: yes
configure:21389: checking sys/param.h usability
configure:21389: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking sys/param.h presence
configure:21389: cc -E -I/usr/local/include conftest.c
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking for sys/param.h
configure:21389: result: yes
configure:21389: checking sys/resource.h usability
configure:21389: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking sys/resource.h presence
configure:21389: cc -E -I/usr/local/include conftest.c
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking for sys/resource.h
configure:21389: result: yes
configure:21389: checking sys/select.h usability
configure:21389: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking sys/select.h presence
configure:21389: cc -E -I/usr/local/include conftest.c
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking for sys/select.h
configure:21389: result: yes
configure:21389: checking sys/socket.h usability
configure:21389: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking sys/socket.h presence
configure:21389: cc -E -I/usr/local/include conftest.c
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking for sys/socket.h
configure:21389: result: yes
configure:21389: checking for sys/stat.h
configure:21389: result: yes
configure:21389: checking sys/time.h usability
configure:21389: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking sys/time.h presence
configure:21389: cc -E -I/usr/local/include conftest.c
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking for sys/time.h
configure:21389: result: yes
configure:21389: checking sys/times.h usability
configure:21389: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking sys/times.h presence
configure:21389: cc -E -I/usr/local/include conftest.c
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking for sys/times.h
configure:21389: result: yes
configure:21389: checking sys/utsname.h usability
configure:21389: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking sys/utsname.h presence
configure:21389: cc -E -I/usr/local/include conftest.c
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking for sys/utsname.h
configure:21389: result: yes
configure:21389: checking for unistd.h
configure:21389: result: yes
configure:21389: checking utime.h usability
configure:21389: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking utime.h presence
configure:21389: cc -E -I/usr/local/include conftest.c
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking for utime.h
configure:21389: result: yes
configure:21407: checking errno.h usability
configure:21407: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21407: $? = 0
configure:21407: result: yes
configure:21407: checking errno.h presence
configure:21407: cc -E -I/usr/local/include conftest.c
configure:21407: $? = 0
configure:21407: result: yes
configure:21407: checking for errno.h
configure:21407: result: yes
configure:21407: checking for inttypes.h
configure:21407: result: yes
configure:21407: checking limits.h usability
configure:21407: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21407: $? = 0
configure:21407: result: yes
configure:21407: checking limits.h presence
configure:21407: cc -E -I/usr/local/include conftest.c
configure:21407: $? = 0
configure:21407: result: yes
configure:21407: checking for limits.h
configure:21407: result: yes
configure:21407: checking locale.h usability
configure:21407: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21407: $? = 0
configure:21407: result: yes
configure:21407: checking locale.h presence
configure:21407: cc -E -I/usr/local/include conftest.c
configure:21407: $? = 0
configure:21407: result: yes
configure:21407: checking for locale.h
configure:21407: result: yes
configure:21407: checking stdarg.h usability
configure:21407: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21407: $? = 0
configure:21407: result: yes
configure:21407: checking stdarg.h presence
configure:21407: cc -E -I/usr/local/include conftest.c
configure:21407: $? = 0
configure:21407: result: yes
configure:21407: checking for stdarg.h
configure:21407: result: yes
configure:21407: checking stdbool.h usability
configure:21407: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21407: $? = 0
configure:21407: result: yes
configure:21407: checking stdbool.h presence
configure:21407: cc -E -I/usr/local/include conftest.c
configure:21407: $? = 0
configure:21407: result: yes
configure:21407: checking for stdbool.h
configure:21407: result: yes
configure:21407: checking for stdint.h
configure:21407: result: yes
configure:21407: checking for string.h
configure:21407: result: yes
configure:21420: checking whether setjmp.h is POSIX.1 compatible
configure:21438: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21438: $? = 0
configure:21445: result: yes
configure:21447: checking whether sigsetjmp is declared
configure:21447: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21447: $? = 0
configure:21447: result: yes
configure:21458: checking whether siglongjmp is declared
configure:21458: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21458: $? = 0
configure:21458: result: yes
configure:21482: checking for GNU C library with version >= 2
configure:21505: result: no
configure:21516: checking return type of signal handlers
configure:21534: cc -c -g -O2 -I/usr/local/include conftest.c >&5
conftest.c:79:8: error: indirection requires pointer operand ('void' invalid)
return *(signal (0, 0)) (0) == 1;
^~~~~~~~~~~~~~~~~~~~
1 error generated.
configure:21534: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| /* end confdefs.h. */
| #include <sys/types.h>
| #include <signal.h>
|
| int
| main ()
| {
| return *(signal (0, 0)) (0) == 1;
| ;
| return 0;
| }
configure:21541: result: void
configure:21550: checking for uint64_t
configure:21550: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21550: $? = 0
configure:21550: result: yes
configure:21564: checking for pid_t
configure:21564: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21564: $? = 0
configure:21564: cc -c -g -O2 -I/usr/local/include conftest.c >&5
conftest.c:110:20: error: expected expression
if (sizeof ((pid_t)))
^
1 error generated.
configure:21564: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
| if (sizeof ((pid_t)))
| return 0;
| ;
| return 0;
| }
configure:21564: result: yes
configure:21575: checking for size_t
configure:21575: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21575: $? = 0
configure:21575: cc -c -g -O2 -I/usr/local/include conftest.c >&5
conftest.c:110:21: error: expected expression
if (sizeof ((size_t)))
^
1 error generated.
configure:21575: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
| if (sizeof ((size_t)))
| return 0;
| ;
| return 0;
| }
configure:21575: result: yes
configure:21586: checking whether SIZE_MAX is declared
configure:21619: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:21619: $? = 0
configure:21619: ./conftest
configure:21619: $? = 0
configure:21629: result: yes
configure:21637: checking for blkcnt_t
configure:21637: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21637: $? = 0
configure:21637: cc -c -g -O2 -I/usr/local/include conftest.c >&5
conftest.c:111:23: error: expected expression
if (sizeof ((blkcnt_t)))
^
1 error generated.
configure:21637: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
| if (sizeof ((blkcnt_t)))
| return 0;
| ;
| return 0;
| }
configure:21637: result: yes
configure:21649: checking for type of socket length
configure:21675: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21675: $? = 0
configure:21695: result: socklen_t *
configure:21704: checking for stack_t
configure:21704: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21704: $? = 0
configure:21704: cc -c -g -O2 -I/usr/local/include conftest.c >&5
conftest.c:81:22: error: expected expression
if (sizeof ((stack_t)))
^
1 error generated.
configure:21704: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| /* end confdefs.h. */
| #include <signal.h>
|
| int
| main ()
| {
| if (sizeof ((stack_t)))
| return 0;
| ;
| return 0;
| }
configure:21704: result: yes
configure:21720: checking for intptr_t
configure:21720: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21720: $? = 0
configure:21720: cc -c -g -O2 -I/usr/local/include conftest.c >&5
conftest.c:87:23: error: expected expression
if (sizeof ((intptr_t)))
^
1 error generated.
configure:21720: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| /* end confdefs.h. */
| #ifdef HAVE_INTTYPES_H
| #include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| #include <stdint.h>
| #endif
|
| int
| main ()
| {
| if (sizeof ((intptr_t)))
| return 0;
| ;
| return 0;
| }
configure:21720: result: yes
configure:21735: checking for uintptr_t
configure:21735: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21735: $? = 0
configure:21735: cc -c -g -O2 -I/usr/local/include conftest.c >&5
conftest.c:88:24: error: expected expression
if (sizeof ((uintptr_t)))
^
1 error generated.
configure:21735: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| /* end confdefs.h. */
| #ifdef HAVE_INTTYPES_H
| #include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| #include <stdint.h>
| #endif
|
| int
| main ()
| {
| if (sizeof ((uintptr_t)))
| return 0;
| ;
| return 0;
| }
configure:21735: result: yes
configure:21758: checking whether byte ordering is bigendian
configure:21781: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21781: $? = 0
configure:21799: cc -c -g -O2 -I/usr/local/include conftest.c >&5
conftest.c:86:2: error: use of undeclared identifier 'not'
not big endian
^
1 error generated.
configure:21799: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| /* end confdefs.h. */
| #include <sys/types.h>
| #include <sys/param.h>
|
| int
| main ()
| {
| #if BYTE_ORDER != BIG_ENDIAN
| not big endian
| #endif
|
| ;
| return 0;
| }
configure:21873: result: no
configure:21887: checking for an ANSI C-conforming const
configure:21953: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:21953: $? = 0
configure:21960: result: yes
configure:21972: checking for cc option to accept ISO C99
configure:22121: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:22121: $? = 0
configure:22134: result: none needed
configure:22242: checking for cc option to accept ISO Standard C
configure:22253: result: none needed
configure:22260: checking for inline
configure:22275: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:22275: $? = 0
configure:22282: result: inline
configure:22298: checking size of int
configure:22303: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:22303: $? = 0
configure:22303: ./conftest
configure:22303: $? = 0
configure:22317: result: 4
configure:22339: checking size of long
configure:22344: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:22344: $? = 0
configure:22344: ./conftest
configure:22344: $? = 0
configure:22358: result: 8
configure:22372: checking size of long long
configure:22377: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:22377: $? = 0
configure:22377: ./conftest
configure:22377: $? = 0
configure:22391: result: 8
configure:22405: checking size of double
configure:22410: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:22410: $? = 0
configure:22410: ./conftest
configure:22410: $? = 0
configure:22424: result: 8
configure:22438: checking size of long double
configure:22443: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:22443: $? = 0
configure:22443: ./conftest
configure:22443: $? = 0
configure:22457: result: 16
configure:22471: checking size of size_t
configure:22476: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:22476: $? = 0
configure:22476: ./conftest
configure:22476: $? = 0
configure:22490: result: 8
configure:22502: checking whether we can compute C Make dependencies
configure:22537: result: yes, using cc -MM
configure:22561: checking whether cc supports -c -o FILE.lo
configure:22571: cc -g -O2 -c conftest.c -o TMP/conftest.lo 1>&5
configure:22574: $? = 0
configure:22577: cc -g -O2 -c conftest.c -o TMP/conftest.lo 1>&5
configure:22580: $? = 0
configure:22588: result: yes
configure:22617: checking for cc option to support OpenMP
configure:22632: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
conftest.c:89:2: error: unknown type name 'choke'
choke me
^
conftest.c:91:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:22632: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:22650: cc -o conftest -g -O2 -fopenmp -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
conftest.c:89:2: error: unknown type name 'choke'
choke me
^
conftest.c:91:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:22650: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:22650: cc -o conftest -g -O2 -xopenmp -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
clang: error: language not recognized: 'openmp'
configure:22650: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:22650: cc -o conftest -g -O2 -openmp -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
conftest.c:89:2: error: unknown type name 'choke'
choke me
^
conftest.c:91:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:22650: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:22650: cc -o conftest -g -O2 -mp -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
conftest.c:89:2: error: unknown type name 'choke'
choke me
^
conftest.c:91:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:22650: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:22650: cc -o conftest -g -O2 -omp -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
conftest.c:89:2: error: unknown type name 'choke'
choke me
^
conftest.c:91:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:22650: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:22650: cc -o conftest -g -O2 -qsmp=omp -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
clang: warning: argument unused during compilation: '-qsmp=omp'
conftest.c:89:2: error: unknown type name 'choke'
choke me
^
conftest.c:91:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:22650: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:22650: cc -o conftest -g -O2 -homp -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
clang: warning: argument unused during compilation: '-homp'
conftest.c:89:2: error: unknown type name 'choke'
choke me
^
conftest.c:91:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:22650: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:22650: cc -o conftest -g -O2 -Popenmp -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
clang: warning: argument unused during compilation: '-Popenmp'
conftest.c:89:2: error: unknown type name 'choke'
choke me
^
conftest.c:91:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:22650: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:22650: cc -o conftest -g -O2 --openmp -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
clang: error: unsupported option '--openmp'
configure:22650: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:22664: result: unsupported
configure:22695: checking how to get verbose linking output from /usr/bin/gfortran
configure:22705: /usr/bin/gfortran -c conftest.f >&5
configure:22705: $? = 0
configure:22723: /usr/bin/gfortran -o conftest -v -L/usr/local/lib conftest.f
Using built-in specs.
Target: i686-apple-darwin11
Thread model: posix
gcc version 4.2.1 (Apple Inc. build 5666) (dot 3)
/usr/libexec/gcc/i686-apple-darwin11/4.2.1/f951 conftest.f -ffixed-form -fPIC -quiet -dumpbase conftest.f -mmacosx-version-min=10.8.3 -m64 -mtune=core2 -auxbase conftest -version -I /usr/lib/gcc/i686-apple-darwin11/4.2.1/finclude -o /var/folders/z2/1_f43_212cn4gbyftt8db3p40000gn/T//ccg3OkOE.s
GNU F95 version 4.2.1 (Apple Inc. build 5666) (dot 3) (i686-apple-darwin11)
compiled by GNU C version 4.2.1 (Apple Inc. build 5666) (dot 3).
GGC heuristics: --param ggc-min-expand=150 --param ggc-min-heapsize=131072
/usr/libexec/gcc/i686-apple-darwin11/4.2.1/as -arch x86_64 -force_cpusubtype_ALL -o /var/folders/z2/1_f43_212cn4gbyftt8db3p40000gn/T//cctT9Vab.o /var/folders/z2/1_f43_212cn4gbyftt8db3p40000gn/T//ccg3OkOE.s
/usr/libexec/gcc/i686-apple-darwin11/4.2.1/collect2 -dynamic -arch x86_64 -macosx_version_min 10.8.3 -weak_reference_mismatches non-weak -o conftest -lcrt1.10.6.o -L/usr/local/lib -L/usr/lib/gcc/i686-apple-darwin11/4.2.1/x86_64 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1/x86_64 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1/../../.. /var/folders/z2/1_f43_212cn4gbyftt8db3p40000gn/T//cctT9Vab.o -lgfortranbegin -lgfortran -lSystem -lgcc -lSystem
configure:22806: result: -v
configure:22808: checking for Fortran 77 libraries of /usr/bin/gfortran
configure:22831: /usr/bin/gfortran -o conftest -v -L/usr/local/lib conftest.f
Using built-in specs.
Target: i686-apple-darwin11
Thread model: posix
gcc version 4.2.1 (Apple Inc. build 5666) (dot 3)
/usr/libexec/gcc/i686-apple-darwin11/4.2.1/f951 conftest.f -ffixed-form -fPIC -quiet -dumpbase conftest.f -mmacosx-version-min=10.8.3 -m64 -mtune=core2 -auxbase conftest -version -I /usr/lib/gcc/i686-apple-darwin11/4.2.1/finclude -o /var/folders/z2/1_f43_212cn4gbyftt8db3p40000gn/T//cclC0aSZ.s
GNU F95 version 4.2.1 (Apple Inc. build 5666) (dot 3) (i686-apple-darwin11)
compiled by GNU C version 4.2.1 (Apple Inc. build 5666) (dot 3).
GGC heuristics: --param ggc-min-expand=150 --param ggc-min-heapsize=131072
/usr/libexec/gcc/i686-apple-darwin11/4.2.1/as -arch x86_64 -force_cpusubtype_ALL -o /var/folders/z2/1_f43_212cn4gbyftt8db3p40000gn/T//ccUYMdVc.o /var/folders/z2/1_f43_212cn4gbyftt8db3p40000gn/T//cclC0aSZ.s
/usr/libexec/gcc/i686-apple-darwin11/4.2.1/collect2 -dynamic -arch x86_64 -macosx_version_min 10.8.3 -weak_reference_mismatches non-weak -o conftest -lcrt1.10.6.o -L/usr/local/lib -L/usr/lib/gcc/i686-apple-darwin11/4.2.1/x86_64 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1/x86_64 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1/../../.. /var/folders/z2/1_f43_212cn4gbyftt8db3p40000gn/T//ccUYMdVc.o -lgfortranbegin -lgfortran -lSystem -lgcc -lSystem
configure:23027: result: -L/usr/local/lib -L/usr/lib/gcc/i686-apple-darwin11/4.2.1/x86_64 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1/../../.. -lgfortranbegin -lgfortran
configure:23045: checking how to get verbose linking output from cc
configure:23061: cc -c -g -O2 -I/usr/local/include conftest.c >&5
configure:23061: $? = 0
configure:23083: cc -o conftest -g -O2 -v -I/usr/local/include -L/usr/local/lib conftest.c >&5
Apple LLVM version 4.2 (clang-425.0.27) (based on LLVM 3.2svn)
Target: x86_64-apple-darwin12.3.0
Thread model: posix
"/usr/bin/clang" -cc1 -triple x86_64-apple-macosx10.8.0 -emit-obj -disable-free -disable-llvm-verifier -main-file-name conftest.c -pic-level 2 -mdisable-fp-elim -masm-verbose -munwind-tables -target-cpu core2 -target-linker-version 136 -v -g -resource-dir /usr/bin/../lib/clang/4.2 -isystem /usr/local/include -isystem /opt/X11/include/freetype2 -isystem /usr/include/libxml2 -isystem /opt/X11/include -I /usr/local/include -I /usr/local/opt/readline/include -fmodule-cache-path /var/folders/z2/1_f43_212cn4gbyftt8db3p40000gn/T/clang-module-cache -O2 -fdebug-compilation-dir /private/tmp/r-d7n2/R-2.15.3 -ferror-limit 19 -fmessage-length 0 -stack-protector 1 -mstackrealign -fblocks -fobjc-runtime=macosx-10.8.0 -fobjc-dispatch-method=mixed -fobjc-default-synthesize-properties -fdiagnostics-show-option -o /var/folders/z2/1_f43_212cn4gbyftt8db3p40000gn/T/conftest-4dP18c.o -x c conftest.c
clang -cc1 version 4.2 based upon LLVM 3.2svn default target x86_64-apple-darwin12.3.0
ignoring duplicate directory "/usr/local/include"
as it is a non-system directory that duplicates a system directory
ignoring duplicate directory "/usr/local/include"
#include "..." search starts here:
#include <...> search starts here:
/usr/local/opt/readline/include
/usr/local/include
/opt/X11/include/freetype2
/usr/include/libxml2
/opt/X11/include
/usr/bin/../lib/clang/4.2/include
/usr/include
/System/Library/Frameworks (framework directory)
/Library/Frameworks (framework directory)
End of search list.
"/usr/bin/ld" -demangle -dynamic -arch x86_64 -macosx_version_min 10.8.0 -o conftest -L/usr/local/lib -L/usr/local/opt/readline/lib -L/usr/local/lib -L/opt/X11/lib /var/folders/z2/1_f43_212cn4gbyftt8db3p40000gn/T/conftest-4dP18c.o -lSystem /usr/bin/../lib/clang/4.2/lib/darwin/libclang_rt.osx.a
"/usr/bin/dsymutil" -o conftest.dSYM conftest
configure:23129: result: -v
configure:23131: checking for C libraries of cc
configure:23158: cc -o conftest -g -O2 -v -I/usr/local/include -L/usr/local/lib conftest.c >&5
Apple LLVM version 4.2 (clang-425.0.27) (based on LLVM 3.2svn)
Target: x86_64-apple-darwin12.3.0
Thread model: posix
"/usr/bin/clang" -cc1 -triple x86_64-apple-macosx10.8.0 -emit-obj -disable-free -disable-llvm-verifier -main-file-name conftest.c -pic-level 2 -mdisable-fp-elim -masm-verbose -munwind-tables -target-cpu core2 -target-linker-version 136 -v -g -resource-dir /usr/bin/../lib/clang/4.2 -isystem /usr/local/include -isystem /opt/X11/include/freetype2 -isystem /usr/include/libxml2 -isystem /opt/X11/include -I /usr/local/include -I /usr/local/opt/readline/include -fmodule-cache-path /var/folders/z2/1_f43_212cn4gbyftt8db3p40000gn/T/clang-module-cache -O2 -fdebug-compilation-dir /private/tmp/r-d7n2/R-2.15.3 -ferror-limit 19 -fmessage-length 0 -stack-protector 1 -mstackrealign -fblocks -fobjc-runtime=macosx-10.8.0 -fobjc-dispatch-method=mixed -fobjc-default-synthesize-properties -fdiagnostics-show-option -o /var/folders/z2/1_f43_212cn4gbyftt8db3p40000gn/T/conftest-bID8rz.o -x c conftest.c
clang -cc1 version 4.2 based upon LLVM 3.2svn default target x86_64-apple-darwin12.3.0
ignoring duplicate directory "/usr/local/include"
as it is a non-system directory that duplicates a system directory
ignoring duplicate directory "/usr/local/include"
#include "..." search starts here:
#include <...> search starts here:
/usr/local/opt/readline/include
/usr/local/include
/opt/X11/include/freetype2
/usr/include/libxml2
/opt/X11/include
/usr/bin/../lib/clang/4.2/include
/usr/include
/System/Library/Frameworks (framework directory)
/Library/Frameworks (framework directory)
End of search list.
"/usr/bin/ld" -demangle -dynamic -arch x86_64 -macosx_version_min 10.8.0 -o conftest -L/usr/local/lib -L/usr/local/opt/readline/lib -L/usr/local/lib -L/opt/X11/lib /var/folders/z2/1_f43_212cn4gbyftt8db3p40000gn/T/conftest-bID8rz.o -lSystem /usr/bin/../lib/clang/4.2/lib/darwin/libclang_rt.osx.a
"/usr/bin/dsymutil" -o conftest.dSYM conftest
configure:23309: result: -L/usr/local/lib -L/usr/local/opt/readline/lib -L/opt/X11/lib -lSystem /usr/bin/../lib/clang/4.2/lib/darwin/libclang_rt.osx.a
configure:23444: checking for dummy main to link with Fortran 77 libraries
configure:23478: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.c -lm -L/usr/lib/gcc/i686-apple-darwin11/4.2.1/x86_64 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1 -L/usr/lib -lgfortran >&5
configure:23478: $? = 0
configure:23523: result: none
configure:23556: checking for Fortran 77 name-mangling scheme
configure:23569: /usr/bin/gfortran -c conftest.f >&5
configure:23569: $? = 0
configure:23610: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.c cfortran_test.o -lm -L/usr/lib/gcc/i686-apple-darwin11/4.2.1/x86_64 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1 -L/usr/lib -lgfortran >&5
Undefined symbols for architecture x86_64:
"_foobar", referenced from:
_main in conftest-jvyucM.o
(maybe you meant: _foobar_)
ld: symbol(s) not found for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
configure:23610: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| /* end confdefs.h. */
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char foobar ();
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
| return foobar ();
| ;
| return 0;
| }
configure:23610: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.c cfortran_test.o -lm -L/usr/lib/gcc/i686-apple-darwin11/4.2.1/x86_64 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1 -L/usr/lib -lgfortran >&5
configure:23610: $? = 0
configure:23668: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.c cfortran_test.o -lm -L/usr/lib/gcc/i686-apple-darwin11/4.2.1/x86_64 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1 -L/usr/lib -lgfortran >&5
configure:23668: $? = 0
configure:23710: result: lower case, underscore, no extra underscore
configure:23787: checking whether /usr/bin/gfortran appends underscores to external names
configure:23803: result: yes
configure:23815: checking whether /usr/bin/gfortran appends extra underscores to external names
configure:23831: result: no
configure:23845: checking whether mixed C/Fortran code can be run
configure:23903: result: yes
configure:23917: checking whether /usr/bin/gfortran and cc agree on int and double
configure:23995: result: yes
configure:24009: checking whether /usr/bin/gfortran and cc agree on double complex
configure:24085: result: yes
configure:24120: checking for /usr/bin/gfortran option to support OpenMP
configure:24135: /usr/bin/gfortran -o conftest -L/usr/local/lib conftest.f -lm >&5
conftest.f:5.9:
tid = 42
1
Error: Symbol 'tid' at (1) has no IMPLICIT type
configure:24135: $? = 1
configure: failed program was:
|
| program main
| implicit none
| !$ integer tid
| tid = 42
| call omp_set_num_threads(2)
| end
|
configure:24153: /usr/bin/gfortran -o conftest -fopenmp -L/usr/local/lib conftest.f -lm >&5
configure:24153: $? = 0
configure:24167: result: -fopenmp
configure:24189: checking whether c++ accepts -M for generating dependencies
configure:24204: result: yes
configure:24249: checking for c++ option to support OpenMP
configure:24264: c++ -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.cpp -lm >&5
conftest.cpp:93:2: error: unknown type name 'choke'
choke me
^
conftest.cpp:95:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:24264: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:24282: c++ -o conftest -g -O2 -fopenmp -I/usr/local/include -L/usr/local/lib conftest.cpp -lm >&5
conftest.cpp:93:2: error: unknown type name 'choke'
choke me
^
conftest.cpp:95:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:24282: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:24282: c++ -o conftest -g -O2 -xopenmp -I/usr/local/include -L/usr/local/lib conftest.cpp -lm >&5
clang: error: language not recognized: 'openmp'
configure:24282: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:24282: c++ -o conftest -g -O2 -openmp -I/usr/local/include -L/usr/local/lib conftest.cpp -lm >&5
conftest.cpp:93:2: error: unknown type name 'choke'
choke me
^
conftest.cpp:95:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:24282: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:24282: c++ -o conftest -g -O2 -mp -I/usr/local/include -L/usr/local/lib conftest.cpp -lm >&5
conftest.cpp:93:2: error: unknown type name 'choke'
choke me
^
conftest.cpp:95:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:24282: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:24282: c++ -o conftest -g -O2 -omp -I/usr/local/include -L/usr/local/lib conftest.cpp -lm >&5
conftest.cpp:93:2: error: unknown type name 'choke'
choke me
^
conftest.cpp:95:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:24282: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:24282: c++ -o conftest -g -O2 -qsmp=omp -I/usr/local/include -L/usr/local/lib conftest.cpp -lm >&5
clang: warning: argument unused during compilation: '-qsmp=omp'
conftest.cpp:93:2: error: unknown type name 'choke'
choke me
^
conftest.cpp:95:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:24282: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:24282: c++ -o conftest -g -O2 -homp -I/usr/local/include -L/usr/local/lib conftest.cpp -lm >&5
clang: warning: argument unused during compilation: '-homp'
conftest.cpp:93:2: error: unknown type name 'choke'
choke me
^
conftest.cpp:95:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:24282: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:24282: c++ -o conftest -g -O2 -Popenmp -I/usr/local/include -L/usr/local/lib conftest.cpp -lm >&5
clang: warning: argument unused during compilation: '-Popenmp'
conftest.cpp:93:2: error: unknown type name 'choke'
choke me
^
conftest.cpp:95:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:24282: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:24282: c++ -o conftest -g -O2 --openmp -I/usr/local/include -L/usr/local/lib conftest.cpp -lm >&5
clang: error: unsupported option '--openmp'
configure:24282: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:24296: result: unsupported
configure:24316: checking whether we can compute ObjC Make dependencies
configure:24335: result: yes, using cc -MM
configure:24380: checking for ObjC runtime library
configure:24418: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.m -lm -lobjc >&5
configure:24418: $? = 0
configure:24431: result: -lobjc
configure:24437: checking for ObjC runtime style
configure:24476: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.m -lobjc -lm >&5
conftest.m:110:14: warning: implicit declaration of function 'objc_lookup_class' is invalid in C99 [-Wimplicit-function-declaration]
id class = objc_lookup_class ("Object");
^
conftest.m:110:6: warning: incompatible integer to pointer conversion initializing 'id' with an expression of type 'int' [-Wint-conversion]
id class = objc_lookup_class ("Object");
^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2 warnings generated.
Undefined symbols for architecture x86_64:
"_objc_lookup_class", referenced from:
_main in conftest-HFju1G.o
ld: symbol(s) not found for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
configure:24476: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| /* end confdefs.h. */
|
|
| /* see PR#15107 */
| #undef __OBJC2__
| #include <objc/objc.h>
| #include <objc/objc-api.h>
|
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
|
| id class = objc_lookup_class ("Object");
|
| ;
| return 0;
| }
|
configure:24476: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.m -lobjc -lm >&5
conftest.m:110:14: warning: implicit declaration of function 'objc_lookUpClass' is invalid in C99 [-Wimplicit-function-declaration]
id class = objc_lookUpClass ("Object");
^
conftest.m:110:6: warning: incompatible integer to pointer conversion initializing 'id' with an expression of type 'int' [-Wint-conversion]
id class = objc_lookUpClass ("Object");
^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~
2 warnings generated.
configure:24476: $? = 0
configure:24493: result: next
configure:24524: checking whether cc accepts -fobjc-exceptions
configure:24556: cc -o conftest -g -O2 -fobjc-exceptions -I/usr/local/include -L/usr/local/lib conftest.m -lm >&5
configure:24556: $? = 0
configure:24574: result: yes
configure:24600: checking for cached Foundation settings
configure:24610: result: no
configure:24643: checking whether default Foundation framework works
configure:24672: cc -o conftest -g -O2 -fobjc-exceptions -I/usr/local/include -L/usr/local/lib conftest.m -lm >&5
Undefined symbols for architecture x86_64:
"_OBJC_CLASS_$_NSAutoreleasePool", referenced from:
objc-class-ref in conftest-4NmrbS.o
"_objc_msgSend", referenced from:
_main in conftest-4NmrbS.o
"_objc_msgSend_fixup", referenced from:
l_objc_msgSend_fixup_alloc in conftest-4NmrbS.o
l_objc_msgSend_fixup_release in conftest-4NmrbS.o
ld: symbol(s) not found for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
configure:24672: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| /* end confdefs.h. */
|
| #import <Foundation/Foundation.h>
|
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
|
| NSAutoreleasePool *pool = [[NSAutoreleasePool alloc] init];
| NSString *s = @"hello, world";
|
| [pool release];
|
| ;
| return 0;
| }
configure:24682: result: no
configure:24691: checking whether -framework Foundation works
configure:24720: cc -o conftest -g -O2 -fobjc-exceptions -I/usr/local/include -L/usr/local/lib conftest.m -lm -framework Foundation >&5
configure:24720: $? = 0
configure:24726: result: yes
configure:24899: checking for working Foundation implementation
configure:24906: result: yes
configure:24916: checking whether C runtime needs -D__NO_MATH_INLINES
configure:24943: cc -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
conftest.c:104:3: warning: implicitly declaring library function 'exit' with type 'void (int) __attribute__((noreturn))'
exit(0);
^
conftest.c:104:3: note: please include the header <stdlib.h> or explicitly provide a declaration for 'exit'
1 warning generated.
configure:24943: $? = 0
configure:24943: ./conftest
configure:24943: $? = 0
configure:24953: result: no
configure:26001: checking for xmkmf
configure:26034: result: no
configure:26197: checking whether linker supports dynamic lookup
cc -g -O2 conftest.c -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -o libconftest -lm
configure:26210: result: yes
configure:26703: checking for off_t
configure:26703: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:26703: $? = 0
configure:26703: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
conftest.c:130:20: error: expected expression
if (sizeof ((off_t)))
^
1 error generated.
configure:26703: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
| if (sizeof ((off_t)))
| return 0;
| ;
| return 0;
| }
configure:26703: result: yes
configure:26715: checking for working alloca.h
configure:26740: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:26740: $? = 0
configure:26748: result: yes
configure:26756: checking for alloca
configure:26801: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:26801: $? = 0
configure:26809: result: yes
configure:26915: checking whether alloca is declared
configure:26915: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:26915: $? = 0
configure:26915: result: yes
configure:26941: checking whether expm1 exists and is declared
configure:26969: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:26969: $? = 0
configure:26978: result: yes
configure:26941: checking whether hypot exists and is declared
configure:26969: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:26969: $? = 0
configure:26978: result: yes
configure:26941: checking whether log1p exists and is declared
configure:26969: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:26969: $? = 0
configure:26978: result: yes
configure:26941: checking whether log2 exists and is declared
configure:26969: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:26969: $? = 0
configure:26978: result: yes
configure:26941: checking whether log10 exists and is declared
configure:26969: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:26969: $? = 0
configure:26978: result: yes
configure:26941: checking whether nearbyint exists and is declared
configure:26969: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:26969: $? = 0
configure:26978: result: yes
configure:26941: checking whether nearbyintl exists and is declared
configure:26969: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:26969: $? = 0
configure:26978: result: yes
configure:26941: checking whether powl exists and is declared
configure:26969: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:26969: $? = 0
configure:26978: result: yes
configure:26941: checking whether rint exists and is declared
configure:26969: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:26969: $? = 0
configure:26978: result: yes
configure:26941: checking whether rintl exists and is declared
configure:26969: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:26969: $? = 0
configure:26978: result: yes
configure:26992: checking whether va_copy exists and is declared
configure:27020: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27020: $? = 0
configure:27029: result: yes
configure:27045: checking for isblank
configure:27045: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27045: $? = 0
configure:27045: result: yes
configure:27060: checking for fseeko
configure:27060: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27060: $? = 0
configure:27060: result: yes
configure:27060: checking for ftello
configure:27060: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27060: $? = 0
configure:27060: result: yes
configure:27060: checking for matherr
configure:27060: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27060: $? = 0
configure:27060: result: yes
configure:27074: checking whether fcntl exists and is declared
configure:27102: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27102: $? = 0
configure:27111: result: yes
configure:27124: checking whether getgrgid exists and is declared
configure:27152: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27152: $? = 0
configure:27161: result: yes
configure:27174: checking whether getpwuid exists and is declared
configure:27202: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27202: $? = 0
configure:27211: result: yes
configure:27224: checking whether kill exists and is declared
configure:27252: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27252: $? = 0
configure:27261: result: yes
configure:27224: checking whether sigaction exists and is declared
configure:27252: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27252: $? = 0
configure:27261: result: yes
configure:27224: checking whether sigaltstack exists and is declared
configure:27252: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27252: $? = 0
configure:27261: result: yes
configure:27224: checking whether sigemptyset exists and is declared
configure:27252: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27252: $? = 0
configure:27261: result: yes
configure:27274: checking whether fdopen exists and is declared
configure:27302: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27302: $? = 0
configure:27311: result: yes
configure:27274: checking whether popen exists and is declared
configure:27302: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27302: $? = 0
configure:27311: result: yes
configure:27328: checking whether setenv exists and is declared
configure:27356: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27356: $? = 0
configure:27365: result: yes
configure:27328: checking whether unsetenv exists and is declared
configure:27356: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27356: $? = 0
configure:27365: result: yes
configure:27378: checking whether getrlimit exists and is declared
configure:27406: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27406: $? = 0
configure:27415: result: yes
configure:27378: checking whether getrusage exists and is declared
configure:27406: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27406: $? = 0
configure:27415: result: yes
configure:27378: checking whether getpriority exists and is declared
configure:27406: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27406: $? = 0
configure:27415: result: yes
configure:27428: checking whether chmod exists and is declared
configure:27456: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27456: $? = 0
configure:27465: result: yes
configure:27428: checking whether mkfifo exists and is declared
configure:27456: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27456: $? = 0
configure:27465: result: yes
configure:27428: checking whether stat exists and is declared
configure:27456: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27456: $? = 0
configure:27465: result: yes
configure:27428: checking whether umask exists and is declared
configure:27456: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27456: $? = 0
configure:27465: result: yes
configure:27481: checking whether gettimeofday exists and is declared
configure:27509: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27509: $? = 0
configure:27518: result: yes
configure:27481: checking whether utimes exists and is declared
configure:27509: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27509: $? = 0
configure:27518: result: yes
configure:27531: checking whether times exists and is declared
configure:27559: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27559: $? = 0
configure:27568: result: yes
configure:27581: checking whether access exists and is declared
configure:27611: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27611: $? = 0
configure:27620: result: yes
configure:27581: checking whether chdir exists and is declared
configure:27611: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27611: $? = 0
configure:27620: result: yes
configure:27581: checking whether execv exists and is declared
configure:27611: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27611: $? = 0
configure:27620: result: yes
configure:27581: checking whether ftruncate exists and is declared
configure:27611: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27611: $? = 0
configure:27620: result: yes
configure:27581: checking whether getcwd exists and is declared
configure:27611: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27611: $? = 0
configure:27620: result: yes
configure:27581: checking whether geteuid exists and is declared
configure:27611: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27611: $? = 0
configure:27620: result: yes
configure:27581: checking whether getuid exists and is declared
configure:27611: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27611: $? = 0
configure:27620: result: yes
configure:27581: checking whether link exists and is declared
configure:27611: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27611: $? = 0
configure:27620: result: yes
configure:27581: checking whether readlink exists and is declared
configure:27611: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27611: $? = 0
configure:27620: result: yes
configure:27581: checking whether symlink exists and is declared
configure:27611: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27611: $? = 0
configure:27620: result: yes
configure:27581: checking whether sysconf exists and is declared
configure:27611: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27611: $? = 0
configure:27620: result: yes
configure:27634: checking whether utime exists and is declared
configure:27662: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27662: $? = 0
configure:27671: result: yes
configure:27688: checking whether clock_gettime exists and is declared
configure:27716: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
conftest.c:160:22: error: use of undeclared identifier 'clock_gettime'
char *p = (char *) clock_gettime;
^
1 error generated.
configure:27716: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| /* end confdefs.h. */
| #include <time.h>
|
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
| #ifndef clock_gettime
| char *p = (char *) clock_gettime;
| #endif
|
| ;
| return 0;
| }
configure:27725: result: no
configure:27688: checking whether timespec_get exists and is declared
configure:27716: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
conftest.c:160:22: error: use of undeclared identifier 'timespec_get'
char *p = (char *) timespec_get;
^
1 error generated.
configure:27716: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| /* end confdefs.h. */
| #include <time.h>
|
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
| #ifndef timespec_get
| char *p = (char *) timespec_get;
| #endif
|
| ;
| return 0;
| }
configure:27725: result: no
configure:27795: checking for putenv
configure:27795: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27795: $? = 0
configure:27795: result: yes
configure:27804: checking whether putenv is declared
configure:27804: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:27804: $? = 0
configure:27804: result: yes
configure:27819: checking for vasprintf
configure:27819: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
conftest.c:182:19: warning: format string missing [-Wformat]
return vasprintf ();
~~~~~~~~~ ^
1 warning generated.
configure:27819: $? = 0
configure:27819: result: yes
configure:27828: checking whether vasprintf is declared
configure:27828: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:27828: $? = 0
configure:27828: result: yes
configure:27843: checking for mempcpy
configure:27843: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
Undefined symbols for architecture x86_64:
"_mempcpy", referenced from:
_main in conftest-EORKCu.o
ld: symbol(s) not found for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
configure:27843: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| /* end confdefs.h. */
| /* Define mempcpy to an innocuous variant, in case <limits.h> declares mempcpy.
| For example, HP-UX 11i <limits.h> declares gettimeofday. */
| #define mempcpy innocuous_mempcpy
|
| /* System header to define __stub macros and hopefully few prototypes,
| which can conflict with char mempcpy (); below.
| Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
| <limits.h> exists even on freestanding compilers. */
|
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
|
| #undef mempcpy
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char mempcpy ();
| /* The GNU C library defines this for functions which it implements
| to always fail with ENOSYS. Some functions are actually named
| something starting with __ and the normal name is an alias. */
| #if defined __stub_mempcpy || defined __stub___mempcpy
| choke me
| #endif
|
| int
| main ()
| {
| return mempcpy ();
| ;
| return 0;
| }
configure:27843: result: no
configure:27856: checking for realpath
configure:27856: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27856: $? = 0
configure:27856: result: yes
configure:27865: checking whether realpath is declared
configure:27865: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:27865: $? = 0
configure:27865: result: yes
configure:27885: checking whether glob exists and is declared
configure:27915: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27915: $? = 0
configure:27924: result: yes
configure:27976: checking for isnan
configure:27976: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:27976: $? = 0
configure:27976: result: yes
configure:27985: checking whether isfinite is declared
configure:27985: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:27985: $? = 0
configure:27985: result: yes
configure:27996: checking whether isnan is declared
configure:27996: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:27996: $? = 0
configure:27996: result: yes
configure:28008: checking whether you have IEEE 754 floating-point arithmetic
configure:28020: result: yes
configure:28033: checking whether putenv("FOO") can unset an environment variable
configure:28063: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28063: $? = 0
configure:28063: ./conftest
configure:28063: $? = 1
configure: program exited with status 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| /* end confdefs.h. */
|
| #include "confdefs.h"
| #include <stdlib.h>
| #include <string.h>
| int main()
| {
| char *p;
| #ifdef HAVE_PUTENV
| putenv("R_TEST=testit");
| p = getenv("R_TEST");
| if(!p) exit(10);
| if(strcmp(p, "testit")) exit(11);
| putenv("R_TEST");
| p = getenv("R_TEST");
| if(!p) exit(0);
| #endif
| exit(1);
| }
|
configure:28073: result: no
configure:28083: checking whether putenv("FOO=") can unset an environment variable
configure:28113: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28113: $? = 0
configure:28113: ./conftest
configure:28113: $? = 1
configure: program exited with status 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| /* end confdefs.h. */
|
| #include "confdefs.h"
| #include <stdlib.h>
| #include <string.h>
| int main()
| {
| char *p;
| #ifdef HAVE_PUTENV
| putenv("R_TEST=testit");
| p = getenv("R_TEST");
| if(!p) exit(10);
| if(strcmp(p, "testit")) exit(11);
| putenv("R_TEST=");
| p = getenv("R_TEST");
| if(!p) exit(0);
| #endif
| exit(1);
| }
|
configure:28123: result: no
configure:28138: checking for nl_langinfo and CODESET
configure:28162: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28162: $? = 0
configure:28171: result: yes
configure:28208: checking for mkdtemp
configure:28208: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28208: $? = 0
configure:28208: result: yes
configure:28221: checking for strdup
configure:28221: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
conftest.c:183:6: warning: incompatible redeclaration of library function 'strdup'
char strdup ();
^
conftest.c:183:6: note: 'strdup' is a builtin with type 'char *(const char *)'
1 warning generated.
configure:28221: $? = 0
configure:28221: result: yes
configure:28234: checking for strncasecmp
configure:28234: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
conftest.c:184:6: warning: incompatible redeclaration of library function 'strncasecmp'
char strncasecmp ();
^
conftest.c:184:6: note: 'strncasecmp' is a builtin with type 'int (const char *, const char *, unsigned long)'
1 warning generated.
configure:28234: $? = 0
configure:28234: result: yes
configure:28249: checking whether mkdtemp is declared
configure:28249: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:28249: $? = 0
configure:28249: result: yes
configure:28259: checking whether strdup is declared
configure:28259: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:28259: $? = 0
configure:28259: result: yes
configure:28269: checking whether strncasecmp is declared
configure:28269: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:28269: $? = 0
configure:28269: result: yes
configure:28281: checking for library containing connect
configure:28320: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28320: $? = 0
configure:28337: result: none required
configure:28346: checking for library containing gethostbyname
configure:28385: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28385: $? = 0
configure:28402: result: none required
configure:28410: checking for library containing xdr_string
configure:28449: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28449: $? = 0
configure:28466: result: none required
configure:28474: checking for __setfpucw
configure:28474: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
Undefined symbols for architecture x86_64:
"___setfpucw", referenced from:
_main in conftest-YTY1bw.o
ld: symbol(s) not found for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
configure:28474: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| /* end confdefs.h. */
| /* Define __setfpucw to an innocuous variant, in case <limits.h> declares __setfpucw.
| For example, HP-UX 11i <limits.h> declares gettimeofday. */
| #define __setfpucw innocuous___setfpucw
|
| /* System header to define __stub macros and hopefully few prototypes,
| which can conflict with char __setfpucw (); below.
| Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
| <limits.h> exists even on freestanding compilers. */
|
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
|
| #undef __setfpucw
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char __setfpucw ();
| /* The GNU C library defines this for functions which it implements
| to always fail with ENOSYS. Some functions are actually named
| something starting with __ and the normal name is an alias. */
| #if defined __stub___setfpucw || defined __stub_____setfpucw
| choke me
| #endif
|
| int
| main ()
| {
| return __setfpucw ();
| ;
| return 0;
| }
configure:28474: result: no
configure:28517: checking for working calloc
configure:28535: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28535: $? = 0
configure:28535: ./conftest
configure:28535: $? = 0
configure:28545: result: yes
configure:28554: checking for working isfinite
configure:28577: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28577: $? = 0
configure:28577: ./conftest
configure:28577: $? = 0
configure:28587: result: yes
configure:28597: checking for working log1p
configure:28638: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28638: $? = 0
configure:28638: ./conftest
configure:28638: $? = 0
configure:28648: result: yes
configure:28660: checking whether ftell works correctly on files opened for append
configure:28689: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
conftest.c:172:1: warning: type specifier missing, defaults to 'int' [-Wimplicit-int]
main() {
^~~~
conftest.c:182:5: warning: implicit declaration of function 'unlink' is invalid in C99 [-Wimplicit-function-declaration]
unlink("testit");
^
2 warnings generated.
configure:28689: $? = 0
configure:28689: ./conftest
configure:28689: $? = 0
configure:28699: result: yes
configure:28708: checking for working sigaction
configure:28737: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28737: $? = 0
configure:28737: ./conftest
configure:28737: $? = 0
configure:28747: result: yes
configure:28755: checking whether mktime sets errno
configure:28784: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28784: $? = 0
configure:28784: ./conftest
configure:28784: $? = 1
configure: program exited with status 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| /* end confdefs.h. */
|
| #include <stdlib.h>
| #include <time.h>
| #include <errno.h>
|
| int main()
| {
| struct tm tm;
| /* It's hard to know what is an error, since mktime is allowed to
| fix up times and there are 64-bit time_t about.
| But this works for now (yes on Solaris, no on glibc). */
| tm.tm_year = 3000; tm.tm_mon = 0; tm.tm_mday = 0;
| tm.tm_hour = 0; tm.tm_min = 0; tm.tm_sec = 0; tm.tm_isdst = -1;
| errno = 0;
| mktime(&tm);
| exit(errno == 0);
| }
|
configure:28794: result: no
configure:28803: checking complex.h usability
configure:28803: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:28803: $? = 0
configure:28803: result: yes
configure:28803: checking complex.h presence
configure:28803: cc -E -I/usr/local/include conftest.c
configure:28803: $? = 0
configure:28803: result: yes
configure:28803: checking for complex.h
configure:28803: result: yes
configure:28812: checking for double complex
configure:28812: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:28812: $? = 0
configure:28812: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
conftest.c:175:29: error: expected expression
if (sizeof ((double complex)))
^
1 error generated.
configure:28812: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| /* end confdefs.h. */
| #include <complex.h>
|
| int
| main ()
| {
| if (sizeof ((double complex)))
| return 0;
| ;
| return 0;
| }
configure:28812: result: yes
configure:28821: checking whether C99 double complex is supported
configure:28823: result: yes
configure:28832: checking whether cabs exists and is declared
configure:28860: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28860: $? = 0
configure:28869: result: yes
configure:28832: checking whether carg exists and is declared
configure:28860: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28860: $? = 0
configure:28869: result: yes
configure:28832: checking whether cexp exists and is declared
configure:28860: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28860: $? = 0
configure:28869: result: yes
configure:28832: checking whether clog exists and is declared
configure:28860: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28860: $? = 0
configure:28869: result: yes
configure:28832: checking whether csqrt exists and is declared
configure:28860: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28860: $? = 0
configure:28869: result: yes
configure:28832: checking whether cpow exists and is declared
configure:28860: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28860: $? = 0
configure:28869: result: yes
configure:28832: checking whether ccos exists and is declared
configure:28860: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28860: $? = 0
configure:28869: result: yes
configure:28832: checking whether csin exists and is declared
configure:28860: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28860: $? = 0
configure:28869: result: yes
configure:28832: checking whether ctan exists and is declared
configure:28860: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28860: $? = 0
configure:28869: result: yes
configure:28832: checking whether cacos exists and is declared
configure:28860: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28860: $? = 0
configure:28869: result: yes
configure:28832: checking whether casin exists and is declared
configure:28860: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28860: $? = 0
configure:28869: result: yes
configure:28832: checking whether catan exists and is declared
configure:28860: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28860: $? = 0
configure:28869: result: yes
configure:28832: checking whether ccosh exists and is declared
configure:28860: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28860: $? = 0
configure:28869: result: yes
configure:28832: checking whether csinh exists and is declared
configure:28860: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28860: $? = 0
configure:28869: result: yes
configure:28832: checking whether ctanh exists and is declared
configure:28860: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
configure:28860: $? = 0
configure:28869: result: yes
configure:28884: checking for cblas_cdotu_sub in vecLib framework
configure:28918: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -framework vecLib -lm >&5
configure:28918: $? = 0
configure:28936: result: -framework vecLib
configure:30066: checking iconv.h usability
configure:30066: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:30066: $? = 0
configure:30066: result: yes
configure:30066: checking iconv.h presence
configure:30066: cc -E -I/usr/local/include conftest.c
configure:30066: $? = 0
configure:30066: result: yes
configure:30066: checking for iconv.h
configure:30066: result: yes
configure:30078: checking for iconv
configure:30109: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5
Undefined symbols for architecture x86_64:
"_iconv", referenced from:
_main in conftest-HP6mVh.o
"_iconv_close", referenced from:
_main in conftest-HP6mVh.o
"_iconv_open", referenced from:
_main in conftest-HP6mVh.o
ld: symbol(s) not found for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
configure:30109: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| /* end confdefs.h. */
| #include <stdlib.h>
| #ifdef HAVE_ICONV_H
| #include <iconv.h>
| #endif
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
| iconv_t cd = iconv_open("","");
| iconv(cd,NULL,NULL,NULL,NULL);
| iconv_close(cd);
| ;
| return 0;
| }
configure:30141: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm -liconv >&5
configure:30141: $? = 0
configure:30152: result: in libiconv
configure:30159: checking whether iconv accepts "UTF-8", "latin1", "ASCII" and "UCS-*"
configure:30227: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm -liconv >&5
configure:30227: $? = 0
configure:30227: ./conftest
configure:30227: $? = 0
configure:30237: result: yes
configure:30251: checking for iconvlist
configure:30282: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm -liconv >&5
conftest.c:205:11: warning: incompatible pointer types passing 'int (unsigned int, char **, void *)' to parameter of type 'int (*)(unsigned int, const char *const *, void *)' [-Wincompatible-pointer-types]
iconvlist(count_one, NULL);
^~~~~~~~~
/usr/include/iconv.h:170:34: note: passing argument to parameter here
void iconvlist (int (* /*do_one*/) (unsigned int /*namescount*/,
^
1 warning generated.
configure:30282: $? = 0
configure:30289: result: yes
configure:30325: checking for iconv
configure:30355: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm -liconv >&5
configure:30355: $? = 0
configure:30395: result: yes
configure:30416: checking for iconv declaration
configure:30453: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:30453: $? = 0
configure:30464: result:
extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft);
configure:30482: checking wchar.h usability
configure:30482: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:30482: $? = 0
configure:30482: result: yes
configure:30482: checking wchar.h presence
configure:30482: cc -E -I/usr/local/include conftest.c
configure:30482: $? = 0
configure:30482: result: yes
configure:30482: checking for wchar.h
configure:30482: result: yes
configure:30482: checking wctype.h usability
configure:30482: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:30482: $? = 0
configure:30482: result: yes
configure:30482: checking wctype.h presence
configure:30482: cc -E -I/usr/local/include conftest.c
configure:30482: $? = 0
configure:30482: result: yes
configure:30482: checking for wctype.h
configure:30482: result: yes
configure:30505: checking whether mbrtowc exists and is declared
configure:30533: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm -liconv >&5
configure:30533: $? = 0
configure:30542: result: yes
configure:30505: checking whether wcrtomb exists and is declared
configure:30533: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm -liconv >&5
configure:30533: $? = 0
configure:30542: result: yes
configure:30505: checking whether wcscoll exists and is declared
configure:30533: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm -liconv >&5
configure:30533: $? = 0
configure:30542: result: yes
configure:30505: checking whether wcsftime exists and is declared
configure:30533: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm -liconv >&5
configure:30533: $? = 0
configure:30542: result: yes
configure:30505: checking whether wcstod exists and is declared
configure:30533: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm -liconv >&5
configure:30533: $? = 0
configure:30542: result: yes
configure:30555: checking whether mbstowcs exists and is declared
configure:30583: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm -liconv >&5
configure:30583: $? = 0
configure:30592: result: yes
configure:30555: checking whether wcstombs exists and is declared
configure:30583: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm -liconv >&5
configure:30583: $? = 0
configure:30592: result: yes
configure:30605: checking whether wctrans exists and is declared
configure:30634: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm -liconv >&5
configure:30634: $? = 0
configure:30643: result: yes
configure:30605: checking whether iswblank exists and is declared
configure:30634: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm -liconv >&5
configure:30634: $? = 0
configure:30643: result: yes
configure:30605: checking whether wctype exists and is declared
configure:30634: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm -liconv >&5
configure:30634: $? = 0
configure:30643: result: yes
configure:30605: checking whether iswctype exists and is declared
configure:30634: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm -liconv >&5
configure:30634: $? = 0
configure:30643: result: yes
configure:30667: checking for wctrans_t
configure:30667: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:30667: $? = 0
configure:30667: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
conftest.c:210:24: error: expected expression
if (sizeof ((wctrans_t)))
^
1 error generated.
configure:30667: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| #define HAVE_ICONV 1
| #define HAVE_ICONVLIST 1
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_WCHAR_H 1
| #define HAVE_WCTYPE_H 1
| #define HAVE_MBRTOWC 1
| #define HAVE_WCRTOMB 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSTOD 1
| #define HAVE_MBSTOWCS 1
| #define HAVE_WCSTOMBS 1
| #define HAVE_WCTRANS 1
| #define HAVE_ISWBLANK 1
| #define HAVE_WCTYPE 1
| #define HAVE_ISWCTYPE 1
| /* end confdefs.h. */
| #include <wchar.h>
| #include <wctype.h>
|
| int
| main ()
| {
| if (sizeof ((wctrans_t)))
| return 0;
| ;
| return 0;
| }
configure:30667: result: yes
configure:30678: checking for mbstate_t
configure:30678: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:30678: $? = 0
configure:30678: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
conftest.c:211:24: error: expected expression
if (sizeof ((mbstate_t)))
^
1 error generated.
configure:30678: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| #define HAVE_ICONV 1
| #define HAVE_ICONVLIST 1
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_WCHAR_H 1
| #define HAVE_WCTYPE_H 1
| #define HAVE_MBRTOWC 1
| #define HAVE_WCRTOMB 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSTOD 1
| #define HAVE_MBSTOWCS 1
| #define HAVE_WCSTOMBS 1
| #define HAVE_WCTRANS 1
| #define HAVE_ISWBLANK 1
| #define HAVE_WCTYPE 1
| #define HAVE_ISWCTYPE 1
| #define HAVE_WCTRANS_T 1
| /* end confdefs.h. */
| #include <wchar.h>
| #include <wctype.h>
|
| int
| main ()
| {
| if (sizeof ((mbstate_t)))
| return 0;
| ;
| return 0;
| }
configure:30678: result: yes
configure:30704: checking for ICU
configure:30739: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lm -liconv -licuuc -licui18n >&5
conftest.c:207:10: fatal error: 'unicode/utypes.h' file not found
#include <unicode/utypes.h>
^
1 error generated.
configure:30739: $? = 1
configure: program exited with status 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| #define HAVE_ICONV 1
| #define HAVE_ICONVLIST 1
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_WCHAR_H 1
| #define HAVE_WCTYPE_H 1
| #define HAVE_MBRTOWC 1
| #define HAVE_WCRTOMB 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSTOD 1
| #define HAVE_MBSTOWCS 1
| #define HAVE_WCSTOMBS 1
| #define HAVE_WCTRANS 1
| #define HAVE_ISWBLANK 1
| #define HAVE_WCTYPE 1
| #define HAVE_ISWCTYPE 1
| #define HAVE_WCTRANS_T 1
| #define HAVE_MBSTATE_T 1
| /* end confdefs.h. */
|
| #include <unicode/utypes.h>
| #include <unicode/ucol.h>
| #include <unicode/uloc.h>
| #include <unicode/uiter.h>
|
| #include <stdlib.h>
|
| int main () {
| UErrorCode status = U_ZERO_ERROR;
| UCollator *collator;
| UCharIterator aIter;
|
| collator = ucol_open(NULL, &status);
| if (U_FAILURE(status)) exit(1);
| /* check if ICU is complete enough */
| uiter_setUTF8(&aIter, "abc", 3);
| int result = ucol_strcollIter(collator, &aIter, &aIter, &status);
| if (U_FAILURE(status)) exit(1);
| exit(0);
| }
|
configure:30751: result: no
configure:30766: checking for ucol_open in -licucore
configure:30799: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -licucore -lm -liconv >&5
configure:30799: $? = 0
configure:30808: result: yes
configure:30836: checking for X
configure:30944: cc -E -I/usr/local/include conftest.c
configure:30944: $? = 0
configure:30983: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lX11 -licucore -lm -liconv >&5
configure:30983: $? = 0
configure:31033: result: libraries , headers
configure:31156: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -licucore -lm -liconv -lX11 >&5
configure:31156: $? = 0
configure:31270: checking for gethostbyname
configure:31270: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -licucore -lm -liconv >&5
configure:31270: $? = 0
configure:31270: result: yes
configure:31383: checking for connect
configure:31383: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -licucore -lm -liconv >&5
configure:31383: $? = 0
configure:31383: result: yes
configure:31440: checking for remove
configure:31440: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -licucore -lm -liconv >&5
configure:31440: $? = 0
configure:31440: result: yes
configure:31497: checking for shmat
configure:31497: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -licucore -lm -liconv >&5
configure:31497: $? = 0
configure:31497: result: yes
configure:31563: checking for IceConnectionNumber in -lICE
configure:31596: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lICE -licucore -lm -liconv >&5
configure:31596: $? = 0
configure:31605: result: yes
configure:31620: checking X11/Intrinsic.h usability
configure:31620: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:31620: $? = 0
configure:31620: result: yes
configure:31620: checking X11/Intrinsic.h presence
configure:31620: cc -E -I/usr/local/include conftest.c
configure:31620: $? = 0
configure:31620: result: yes
configure:31620: checking for X11/Intrinsic.h
configure:31620: result: yes
configure:31628: checking for XtToolkitInitialize in -lXt
configure:31661: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lXt -lX11 -licucore -lm -liconv >&5
configure:31661: $? = 0
configure:31670: result: yes
configure:31693: result: using X11 ... yes
configure:31709: checking for KeySym
configure:31709: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:31709: $? = 0
configure:31709: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
conftest.c:215:21: error: expected expression
if (sizeof ((KeySym)))
^
1 error generated.
configure:31709: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| #define HAVE_ICONV 1
| #define HAVE_ICONVLIST 1
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_WCHAR_H 1
| #define HAVE_WCTYPE_H 1
| #define HAVE_MBRTOWC 1
| #define HAVE_WCRTOMB 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSTOD 1
| #define HAVE_MBSTOWCS 1
| #define HAVE_WCSTOMBS 1
| #define HAVE_WCTRANS 1
| #define HAVE_ISWBLANK 1
| #define HAVE_WCTYPE 1
| #define HAVE_ISWCTYPE 1
| #define HAVE_WCTRANS_T 1
| #define HAVE_MBSTATE_T 1
| #define HAVE_LIBICUCORE 1
| #define USE_ICU_APPLE 1
| #define USE_ICU 1
| #define HAVE_X11 1
| /* end confdefs.h. */
| #include <X11/X.h>
|
| int
| main ()
| {
| if (sizeof ((KeySym)))
| return 0;
| ;
| return 0;
| }
configure:31709: result: yes
configure:31728: checking X11/Xmu/Atoms.h usability
configure:31728: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:31728: $? = 0
configure:31728: result: yes
configure:31728: checking X11/Xmu/Atoms.h presence
configure:31728: cc -E -I/usr/local/include conftest.c
configure:31728: $? = 0
configure:31728: result: yes
configure:31728: checking for X11/Xmu/Atoms.h
configure:31728: result: yes
configure:31736: checking for XmuInternAtom in -lXmu
configure:31769: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lXmu -lX11 -lXt -licucore -lm -liconv >&5
configure:31769: $? = 0
configure:31778: result: yes
configure:31803: checking whether pkg-config knows about cairo and pango
configure:31815: result: no
configure:31888: checking whether pkg-config knows about cairo
configure:31900: result: yes
configure:31945: checking whether cairo is >= 1.2 and works
configure:31967: cc -o conftest -g -O2 -fPIC -I/usr/local/include -I/opt/X11/include/cairo -I/opt/X11/include/pixman-1 -I/opt/X11/include -I/opt/X11/include/freetype2 -I/opt/X11/include -I/opt/X11/include/libpng15 -I/opt/X11/include -L/usr/local/lib conftest.c -licucore -lm -liconv -L/opt/X11/lib -lz -lcairo -lz -lpixman-1 -lfontconfig -lexpat -lfreetype -lz -lbz2 -lpng15 -lz -lxcb-shm -lX11-xcb -lxcb-render -lXrender -lX11 -lxcb -lXau -lXdmcp >&5
configure:31967: $? = 0
configure:31978: result: yes
configure:32032: checking for CFStringGetSystemEncoding in CoreFoundation framework
configure:32066: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -framework CoreFoundation -licucore -lm -liconv >&5
configure:32066: $? = 0
configure:32084: result: -framework CoreFoundation
configure:32138: checking for tclConfig.sh
configure:32171: result: no
configure:32180: checking for tclConfig.sh in library (sub)directories
configure:32198: result: /usr/lib/tclConfig.sh
configure:32213: checking for tkConfig.sh
configure:32246: result: no
configure:32255: checking for tkConfig.sh in library (sub)directories
configure:32273: result: /usr/lib/tkConfig.sh
configure:32337: checking tcl.h usability
configure:32337: cc -c -g -O2 -fPIC -I/usr/local/include -I/System/Library/Frameworks/Tcl.framework/Versions/8.5/Headers conftest.c >&5
configure:32337: $? = 0
configure:32337: result: yes
configure:32337: checking tcl.h presence
configure:32337: cc -E -I/usr/local/include -I/System/Library/Frameworks/Tcl.framework/Versions/8.5/Headers conftest.c
configure:32337: $? = 0
configure:32337: result: yes
configure:32337: checking for tcl.h
configure:32337: result: yes
configure:32416: checking tk.h usability
configure:32416: cc -c -g -O2 -fPIC -I/usr/local/include -I/System/Library/Frameworks/Tcl.framework/Versions/8.5/Headers -I/System/Library/Frameworks/Tk.framework/Versions/8.5/Headers conftest.c >&5
configure:32416: $? = 0
configure:32416: result: yes
configure:32416: checking tk.h presence
configure:32416: cc -E -I/usr/local/include -I/System/Library/Frameworks/Tcl.framework/Versions/8.5/Headers -I/System/Library/Frameworks/Tk.framework/Versions/8.5/Headers conftest.c
configure:32416: $? = 0
configure:32416: result: yes
configure:32416: checking for tk.h
configure:32416: result: yes
configure:32713: checking whether compiling/linking Tcl/Tk code works
configure:32751: cc -o conftest -g -O2 -fPIC -I/usr/local/include -I/System/Library/Frameworks/Tcl.framework/Versions/8.5/Headers -I/System/Library/Frameworks/Tk.framework/Versions/8.5/Headers -L/usr/local/lib conftest.c -licucore -lm -liconv -F/System/Library/Frameworks -framework Tcl -F/System/Library/Frameworks -framework Tk >&5
configure:32751: $? = 0
configure:32767: result: yes
configure:32792: checking for BSD networking
configure:32807: result: yes
configure:32828: checking if jpeglib version >= 6b
configure:32850: result: yes
configure:32855: checking for jpeg_destroy_compress in -ljpeg
configure:32888: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -ljpeg -licucore -lm -liconv -licucore -lm -liconv >&5
configure:32888: $? = 0
configure:32897: result: yes
configure:32914: checking for main in -lz
configure:32941: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lz -licucore -lm -liconv >&5
configure:32941: $? = 0
configure:32950: result: yes
configure:32959: checking if libpng version >= 1.2.7
configure:32981: result: yes
configure:32987: checking for png_create_write_struct in -lpng
configure:33020: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -lpng -lz -licucore -lm -liconv -licucore -lm -liconv >&5
configure:33020: $? = 0
configure:33029: result: yes
configure:33048: checking tiffio.h usability
configure:33048: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:33048: $? = 0
configure:33048: result: yes
configure:33048: checking tiffio.h presence
configure:33048: cc -E -I/usr/local/include conftest.c
configure:33048: $? = 0
configure:33048: result: yes
configure:33048: checking for tiffio.h
configure:33048: result: yes
configure:33060: checking for TIFFOpen in -ltiff
configure:33093: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -ltiff -ljpeg -lpng -lz -licucore -lm -liconv >&5
configure:33093: $? = 0
configure:33102: result: yes
configure:33183: checking rpc/types.h usability
configure:33183: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:33183: $? = 0
configure:33183: result: yes
configure:33183: checking rpc/types.h presence
configure:33183: cc -E -I/usr/local/include conftest.c
configure:33183: $? = 0
configure:33183: result: yes
configure:33183: checking for rpc/types.h
configure:33183: result: yes
configure:33190: checking for rpc/xdr.h
configure:33190: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:33190: $? = 0
configure:33190: result: yes
configure:33234: checking for XDR support
configure:33236: result: yes
configure:33355: checking whether zlib support needs to be compiled
configure:33362: result: yes
configure:33364: checking mmap support for zlib
configure:33384: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -licucore -lm -liconv >&5
conftest.c:233:8: warning: incompatible pointer to integer conversion passing 'void *' to parameter of type 'int' [-Wint-conversion]
exit(mmap((caddr_t)0, (off_t)0, PROT_READ, MAP_SHARED, 0, (off_t)0));
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/stdlib.h:159:15: note: passing argument to parameter here
void exit(int) __dead2;
^
1 warning generated.
Undefined symbols for architecture x86_64:
"_main", referenced from:
implicit entry/start for main executable
ld: symbol(s) not found for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
configure:33384: $? = 1
configure: program exited with status 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| #define HAVE_ICONV 1
| #define HAVE_ICONVLIST 1
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_WCHAR_H 1
| #define HAVE_WCTYPE_H 1
| #define HAVE_MBRTOWC 1
| #define HAVE_WCRTOMB 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSTOD 1
| #define HAVE_MBSTOWCS 1
| #define HAVE_WCSTOMBS 1
| #define HAVE_WCTRANS 1
| #define HAVE_ISWBLANK 1
| #define HAVE_WCTYPE 1
| #define HAVE_ISWCTYPE 1
| #define HAVE_WCTRANS_T 1
| #define HAVE_MBSTATE_T 1
| #define HAVE_LIBICUCORE 1
| #define USE_ICU_APPLE 1
| #define USE_ICU 1
| #define HAVE_X11 1
| #define HAVE_KEYSYM 1
| #define HAVE_X11_Xmu 1
| #define HAVE_WORKING_CAIRO 1
| #define HAVE_CAIRO_PDF 1
| #define HAVE_CAIRO_PS 1
| #define HAVE_CAIRO_SVG 1
| #define HAVE_COREFOUNDATION_FW 1
| #define HAVE_AQUA 1
| #define HAVE_TCLTK 1
| #define HAVE_BSD_NETWORKING 1
| #define HAVE_SOCKETS 1
| #define HAVE_INTERNET 1
| #define SUPPORT_LIBXML 1
| #define HAVE_JPEG 1
| #define HAVE_PNG 1
| #define HAVE_TIFFIO_H 1
| #define HAVE_TIFF 1
| /* end confdefs.h. */
|
| #include <stdlib.h>
| #include <sys/types.h>
| #include <sys/mman.h>
| #include <sys/stat.h>
| caddr_t hello() {
| exit(mmap((caddr_t)0, (off_t)0, PROT_READ, MAP_SHARED, 0, (off_t)0));
| }
|
configure:33394: result: yes
configure:33539: checking whether bzip2 support needs to be compiled
configure:33546: result: yes
configure:33561: checking for lzma_version_number in -llzma
configure:33594: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:33594: $? = 0
configure:33603: result: yes
configure:33614: checking lzma.h usability
configure:33614: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:33614: $? = 0
configure:33614: result: yes
configure:33614: checking lzma.h presence
configure:33614: cc -E -I/usr/local/include conftest.c
configure:33614: $? = 0
configure:33614: result: yes
configure:33614: checking for lzma.h
configure:33614: result: yes
configure:33628: checking if lzma version >= 4.999
configure:33657: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:33657: $? = 0
configure:33657: ./conftest
configure:33657: $? = 0
configure:33674: result: yes
configure:33823: checking whether PCRE support needs to be compiled
configure:33829: result: yes
configure:33843: checking whether leap seconds are treated according to POSIX
configure:33870: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:33870: $? = 0
configure:33870: ./conftest
configure:33870: $? = 1
configure: program exited with status 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| #define HAVE_ICONV 1
| #define HAVE_ICONVLIST 1
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_WCHAR_H 1
| #define HAVE_WCTYPE_H 1
| #define HAVE_MBRTOWC 1
| #define HAVE_WCRTOMB 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSTOD 1
| #define HAVE_MBSTOWCS 1
| #define HAVE_WCSTOMBS 1
| #define HAVE_WCTRANS 1
| #define HAVE_ISWBLANK 1
| #define HAVE_WCTYPE 1
| #define HAVE_ISWCTYPE 1
| #define HAVE_WCTRANS_T 1
| #define HAVE_MBSTATE_T 1
| #define HAVE_LIBICUCORE 1
| #define USE_ICU_APPLE 1
| #define USE_ICU 1
| #define HAVE_X11 1
| #define HAVE_KEYSYM 1
| #define HAVE_X11_Xmu 1
| #define HAVE_WORKING_CAIRO 1
| #define HAVE_CAIRO_PDF 1
| #define HAVE_CAIRO_PS 1
| #define HAVE_CAIRO_SVG 1
| #define HAVE_COREFOUNDATION_FW 1
| #define HAVE_AQUA 1
| #define HAVE_TCLTK 1
| #define HAVE_BSD_NETWORKING 1
| #define HAVE_SOCKETS 1
| #define HAVE_INTERNET 1
| #define SUPPORT_LIBXML 1
| #define HAVE_JPEG 1
| #define HAVE_PNG 1
| #define HAVE_TIFFIO_H 1
| #define HAVE_TIFF 1
| #define HAVE_LZMA_H 1
| #define HAVE_LZMA 1
| /* end confdefs.h. */
|
| #include <stdlib.h>
| #include <time.h>
| #include <stdio.h>
| #include "confdefs.h"
|
| int main () {
| struct tm *tm;
| time_t ct = 0; /* required on 64bit AIX */
|
| ctime(&ct);
| ct = ct - (ct % 60);
| tm = gmtime(&ct);
| if(tm->tm_sec == 0) exit(1); else exit(0);
| }
|
configure:33880: result: yes
configure:33890: checking for inline
configure:33906: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:33906: $? = 0
configure:33914: result: inline
configure:33938: checking for sys/time.h
configure:33938: result: yes
configure:33938: checking for stdlib.h
configure:33938: result: yes
configure:33938: checking for unistd.h
configure:33938: result: yes
configure:33938: checking for sys/param.h
configure:33938: result: yes
configure:33955: checking for struct stat.st_atim.tv_nsec
configure:33955: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
conftest.c:249:13: error: no member named 'st_atim' in 'struct stat'
if (ac_aggr.st_atim.tv_nsec)
~~~~~~~ ^
1 error generated.
configure:33955: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| #define HAVE_ICONV 1
| #define HAVE_ICONVLIST 1
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_WCHAR_H 1
| #define HAVE_WCTYPE_H 1
| #define HAVE_MBRTOWC 1
| #define HAVE_WCRTOMB 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSTOD 1
| #define HAVE_MBSTOWCS 1
| #define HAVE_WCSTOMBS 1
| #define HAVE_WCTRANS 1
| #define HAVE_ISWBLANK 1
| #define HAVE_WCTYPE 1
| #define HAVE_ISWCTYPE 1
| #define HAVE_WCTRANS_T 1
| #define HAVE_MBSTATE_T 1
| #define HAVE_LIBICUCORE 1
| #define USE_ICU_APPLE 1
| #define USE_ICU 1
| #define HAVE_X11 1
| #define HAVE_KEYSYM 1
| #define HAVE_X11_Xmu 1
| #define HAVE_WORKING_CAIRO 1
| #define HAVE_CAIRO_PDF 1
| #define HAVE_CAIRO_PS 1
| #define HAVE_CAIRO_SVG 1
| #define HAVE_COREFOUNDATION_FW 1
| #define HAVE_AQUA 1
| #define HAVE_TCLTK 1
| #define HAVE_BSD_NETWORKING 1
| #define HAVE_SOCKETS 1
| #define HAVE_INTERNET 1
| #define SUPPORT_LIBXML 1
| #define HAVE_JPEG 1
| #define HAVE_PNG 1
| #define HAVE_TIFFIO_H 1
| #define HAVE_TIFF 1
| #define HAVE_LZMA_H 1
| #define HAVE_LZMA 1
| #define HAVE_POSIX_LEAPSECONDS 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| /* end confdefs.h. */
| #include <sys/types.h>
| #include <sys/stat.h>
|
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
| static struct stat ac_aggr;
| if (ac_aggr.st_atim.tv_nsec)
| return 0;
| ;
| return 0;
| }
configure:33955: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
conftest.c:249:20: error: no member named 'st_atim' in 'struct stat'
if (sizeof ac_aggr.st_atim.tv_nsec)
~~~~~~~ ^
1 error generated.
configure:33955: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| #define HAVE_ICONV 1
| #define HAVE_ICONVLIST 1
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_WCHAR_H 1
| #define HAVE_WCTYPE_H 1
| #define HAVE_MBRTOWC 1
| #define HAVE_WCRTOMB 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSTOD 1
| #define HAVE_MBSTOWCS 1
| #define HAVE_WCSTOMBS 1
| #define HAVE_WCTRANS 1
| #define HAVE_ISWBLANK 1
| #define HAVE_WCTYPE 1
| #define HAVE_ISWCTYPE 1
| #define HAVE_WCTRANS_T 1
| #define HAVE_MBSTATE_T 1
| #define HAVE_LIBICUCORE 1
| #define USE_ICU_APPLE 1
| #define USE_ICU 1
| #define HAVE_X11 1
| #define HAVE_KEYSYM 1
| #define HAVE_X11_Xmu 1
| #define HAVE_WORKING_CAIRO 1
| #define HAVE_CAIRO_PDF 1
| #define HAVE_CAIRO_PS 1
| #define HAVE_CAIRO_SVG 1
| #define HAVE_COREFOUNDATION_FW 1
| #define HAVE_AQUA 1
| #define HAVE_TCLTK 1
| #define HAVE_BSD_NETWORKING 1
| #define HAVE_SOCKETS 1
| #define HAVE_INTERNET 1
| #define SUPPORT_LIBXML 1
| #define HAVE_JPEG 1
| #define HAVE_PNG 1
| #define HAVE_TIFFIO_H 1
| #define HAVE_TIFF 1
| #define HAVE_LZMA_H 1
| #define HAVE_LZMA 1
| #define HAVE_POSIX_LEAPSECONDS 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| /* end confdefs.h. */
| #include <sys/types.h>
| #include <sys/stat.h>
|
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
| static struct stat ac_aggr;
| if (sizeof ac_aggr.st_atim.tv_nsec)
| return 0;
| ;
| return 0;
| }
configure:33955: result: no
configure:34014: checking for struct stat.st_atimespec.tv_nsec
configure:34014: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:34014: $? = 0
configure:34014: result: yes
configure:34060: checking for setitimer
configure:34060: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:34060: $? = 0
configure:34060: result: yes
configure:34091: checking for special C compiler options needed for large files
configure:34144: result: no
configure:34150: checking for _FILE_OFFSET_BITS value needed for large files
configure:34183: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:34183: $? = 0
configure:34223: result: no
configure:34324: checking for _LARGEFILE_SOURCE value needed for large files
configure:34351: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:34351: $? = 0
configure:34387: result: no
configure:34423: checking whether KERN_USRSTACK sysctl is supported
configure:34450: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:34450: $? = 0
configure:34450: ./conftest
configure:34450: $? = 0
configure:34460: result: yes
configure:34523: checking for lpr
configure:34539: found /usr/bin/lpr
configure:34550: result: lpr
configure:34571: checking for paperconf
configure:34602: result: false
configure:34637: checking for java
configure:34655: found /usr/bin/java
configure:34667: result: /usr/bin/java
configure:34684: checking for javac
configure:34702: found /usr/bin/javac
configure:34714: result: /usr/bin/javac
configure:34729: checking for javah
configure:34747: found /usr/bin/javah
configure:34759: result: /usr/bin/javah
configure:34774: checking for jar
configure:34792: found /usr/bin/jar
configure:34804: result: /usr/bin/jar
configure:34817: checking whether Java compiler works
configure:34834: result: yes
configure:34840: checking whether Java interpreter works
configure:34852: running /usr/bin/java -classpath tools getsp -test
configure:34854: output: 'Test1234OK'
configure:34864: result: yes
configure:34868: checking Java environment
configure:34881: running /usr/bin/java -classpath tools getsp java.home
configure:34883: output: '/System/Library/Java/JavaVirtualMachines/1.6.0.jdk/Contents/Home'
configure:34891: result: /System/Library/Java/JavaVirtualMachines/1.6.0.jdk/Contents/Home
configure:34899: checking for cached Java settings
configure:34909: result: no
configure:35064: checking whether JNI programs can be compiled
configure:35084: cc -o conftest -g -O2 -fPIC -I/System/Library/Frameworks/JavaVM.framework/Headers -L/usr/local/lib conftest.c -framework JavaVM >&5
conftest.c:245:5: warning: 'JNI_CreateJavaVM' is deprecated [-Wdeprecated-declarations]
JNI_CreateJavaVM(0, 0, 0);
^
/System/Library/Frameworks/JavaVM.framework/Headers/jni.h:1937:1: note: 'JNI_CreateJavaVM' declared here
JNI_CreateJavaVM(JavaVM **pvm, void **penv, void *args);
^
1 warning generated.
configure:35084: $? = 0
configure:35121: result: yes
configure:35280: checking for Fortran compiler version
configure:35289: /usr/bin/gfortran --version >&5
GNU Fortran (GCC) 4.2.1 (Apple Inc. build 5666) (dot 3)
Copyright (C) 2007 Free Software Foundation, Inc.
GNU Fortran comes with NO WARRANTY, to the extent permitted by law.
You may redistribute copies of GNU Fortran
under the terms of the GNU General Public License.
For more information about these matters, see the file named COPYING
configure:35300: $? = 0
configure:35289: /usr/bin/gfortran -v >&5
Using built-in specs.
Target: i686-apple-darwin11
Configured with: /Volumes/Media/Builds/gcc-5666.3/build/obj/src/configure --disable-checking --prefix=/usr --mandir=/share/man --enable-languages=c,objc,c++,obj-c++,fortran --program-transform-name=/^[cg][^.-]*$/s/$/-4.2/ --with-slibdir=/usr/lib --build=i686-apple-darwin11 --program-prefix=i686-apple-darwin11- --host=x86_64-apple-darwin11 --target=i686-apple-darwin11 --with-gxx-include-dir=/include/c++/4.2.1
Thread model: posix
gcc version 4.2.1 (Apple Inc. build 5666) (dot 3)
configure:35300: $? = 0
configure:35289: /usr/bin/gfortran -V >&5
gfortran-4.2: argument to `-V' is missing
configure:35300: $? = 1
configure:35289: /usr/bin/gfortran -qversion >&5
i686-apple-darwin11-gfortran-4.2.1: no input files
configure:35300: $? = 1
configure:35309: checking whether we are using the GNU Fortran compiler
configure:35322: /usr/bin/gfortran -c conftest.F >&5
configure:35322: $? = 0
configure:35331: result: yes
configure:35337: checking whether /usr/bin/gfortran accepts -g
configure:35348: /usr/bin/gfortran -c -g conftest.f >&5
configure:35348: $? = 0
configure:35356: result: yes
configure:35492: checking for Fortran compiler version
configure:35501: /usr/bin/gfortran --version >&5
GNU Fortran (GCC) 4.2.1 (Apple Inc. build 5666) (dot 3)
Copyright (C) 2007 Free Software Foundation, Inc.
GNU Fortran comes with NO WARRANTY, to the extent permitted by law.
You may redistribute copies of GNU Fortran
under the terms of the GNU General Public License.
For more information about these matters, see the file named COPYING
configure:35512: $? = 0
configure:35501: /usr/bin/gfortran -v >&5
Using built-in specs.
Target: i686-apple-darwin11
Configured with: /Volumes/Media/Builds/gcc-5666.3/build/obj/src/configure --disable-checking --prefix=/usr --mandir=/share/man --enable-languages=c,objc,c++,obj-c++,fortran --program-transform-name=/^[cg][^.-]*$/s/$/-4.2/ --with-slibdir=/usr/lib --build=i686-apple-darwin11 --program-prefix=i686-apple-darwin11- --host=x86_64-apple-darwin11 --target=i686-apple-darwin11 --with-gxx-include-dir=/include/c++/4.2.1
Thread model: posix
gcc version 4.2.1 (Apple Inc. build 5666) (dot 3)
configure:35512: $? = 0
configure:35501: /usr/bin/gfortran -V >&5
gfortran-4.2: argument to `-V' is missing
configure:35512: $? = 1
configure:35501: /usr/bin/gfortran -qversion >&5
i686-apple-darwin11-gfortran-4.2.1: no input files
configure:35512: $? = 1
configure:35521: checking whether we are using the GNU Fortran compiler
configure:35543: result: yes
configure:35549: checking whether /usr/bin/gfortran accepts -g
configure:35568: result: yes
configure:35706: checking if libtool supports shared libraries
configure:35708: result: yes
configure:35711: checking whether to build shared libraries
configure:35731: result: yes
configure:35734: checking whether to build static libraries
configure:35738: result: no
configure:35764: /usr/bin/gfortran -c conftest.f >&5
configure:35767: $? = 0
configure:35877: checking for /usr/bin/gfortran option to produce PIC
configure:36149: result: -fno-common
configure:36158: checking if /usr/bin/gfortran PIC flag -fno-common works
configure:36176: /usr/bin/gfortran -c -fno-common conftest.f >&5
configure:36180: $? = 0
configure:36193: result: yes
configure:36214: checking if /usr/bin/gfortran static flag -static works
configure:36242: result: no
configure:36254: checking if /usr/bin/gfortran supports -c -o file.o
configure:36275: /usr/bin/gfortran -c -o out/conftest2.o conftest.f >&5
configure:36279: $? = 0
configure:36301: result: yes
configure:36306: checking if /usr/bin/gfortran supports -c -o file.o
configure:36353: result: yes
configure:36383: checking whether the /usr/bin/gfortran linker (/usr/bin/ld) supports shared libraries
configure:37356: result: yes
configure:37493: checking dynamic linker characteristics
configure:38086: result: darwin12.3.0 dyld
configure:38137: checking how to hardcode library paths into programs
configure:38162: result: immediate
configure:38203: checking for Fortran flag to compile .f90 files
configure:38223: /usr/bin/gfortran -c conftest.f90 >&5
configure:38223: $? = 0
configure:38232: result: none
configure:38257: checking for Fortran flag to compile .f95 files
configure:38277: /usr/bin/gfortran -c conftest.f95 >&5
configure:38277: $? = 0
configure:38286: result: none
configure:38315: checking for /usr/bin/gfortran option to support OpenMP
configure:38330: /usr/bin/gfortran -o conftest -L/usr/local/lib conftest.f95 -llzma -licucore -lm -liconv >&5
conftest.f95:5.9:
tid = 42
1
Error: Symbol 'tid' at (1) has no IMPLICIT type
configure:38330: $? = 1
configure: failed program was:
|
| program main
| implicit none
| !$ integer tid
| tid = 42
| call omp_set_num_threads(2)
| end
|
configure:38348: /usr/bin/gfortran -o conftest -fopenmp -L/usr/local/lib conftest.f95 -llzma -licucore -lm -liconv >&5
configure:38348: $? = 0
configure:38362: result: -fopenmp
configure:38611: checking for recommended packages
configure:38627: result: yes
configure:38648: checking whether NLS is requested
configure:38657: result: yes
configure:38665: checking whether make sets $(MAKE)
configure:38687: result: yes
configure:38696: checking for a thread-safe mkdir -p
configure:38735: result: /usr/local/bin/gmkdir -p
configure:38779: checking for msgfmt
configure:38814: result: no
configure:38820: checking for gmsgfmt
configure:38851: result: :
configure:38902: checking for xgettext
configure:38937: result: no
configure:38980: checking for msgmerge
configure:39014: result: no
configure:39026: checking whether we are using the GNU C Library 2 or newer
conftest.c:243:10: fatal error: 'features.h' file not found
#include <features.h>
^
1 error generated.
configure:39053: result: no
configure:39102: checking for ranlib
configure:39129: result: ranlib
configure:39156: checking for simple visibility declarations
configure:39186: cc -c -g -O2 -fPIC -fvisibility=hidden -I/usr/local/include conftest.c >&5
configure:39186: $? = 0
configure:39195: result: yes
configure:39211: checking for stdint.h
configure:39236: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:39236: $? = 0
configure:39243: result: yes
configure:39262: checking for getpagesize
configure:39262: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:39262: $? = 0
configure:39262: result: yes
configure:39271: checking for working mmap
configure:39418: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:39418: $? = 0
configure:39418: ./conftest
configure:39418: $? = 0
configure:39428: result: yes
configure:39439: checking whether integer division by zero raises SIGFPE
configure:39496: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:39496: $? = 0
configure:39496: ./conftest
configure:39496: $? = 0
configure:39507: result: yes
configure:39520: checking for inttypes.h
configure:39545: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:39545: $? = 0
configure:39552: result: yes
configure:39563: checking for unsigned long long int
configure:39592: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:39592: $? = 0
configure:39600: result: yes
configure:39639: checking for inttypes.h
configure:39639: result: yes
configure:39650: checking whether the inttypes.h PRIxNN macros are broken
configure:39679: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:39679: $? = 0
configure:39687: result: no
configure:39763: checking whether imported symbols can be declared weak
configure:39786: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
Undefined symbols for architecture x86_64:
"_xyzzy", referenced from:
_main in conftest-IOOkRH.o
ld: symbol(s) not found for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
configure:39786: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| #define HAVE_ICONV 1
| #define HAVE_ICONVLIST 1
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_WCHAR_H 1
| #define HAVE_WCTYPE_H 1
| #define HAVE_MBRTOWC 1
| #define HAVE_WCRTOMB 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSTOD 1
| #define HAVE_MBSTOWCS 1
| #define HAVE_WCSTOMBS 1
| #define HAVE_WCTRANS 1
| #define HAVE_ISWBLANK 1
| #define HAVE_WCTYPE 1
| #define HAVE_ISWCTYPE 1
| #define HAVE_WCTRANS_T 1
| #define HAVE_MBSTATE_T 1
| #define HAVE_LIBICUCORE 1
| #define USE_ICU_APPLE 1
| #define USE_ICU 1
| #define HAVE_X11 1
| #define HAVE_KEYSYM 1
| #define HAVE_X11_Xmu 1
| #define HAVE_WORKING_CAIRO 1
| #define HAVE_CAIRO_PDF 1
| #define HAVE_CAIRO_PS 1
| #define HAVE_CAIRO_SVG 1
| #define HAVE_COREFOUNDATION_FW 1
| #define HAVE_AQUA 1
| #define HAVE_TCLTK 1
| #define HAVE_BSD_NETWORKING 1
| #define HAVE_SOCKETS 1
| #define HAVE_INTERNET 1
| #define SUPPORT_LIBXML 1
| #define HAVE_JPEG 1
| #define HAVE_PNG 1
| #define HAVE_TIFFIO_H 1
| #define HAVE_TIFF 1
| #define HAVE_LZMA_H 1
| #define HAVE_LZMA 1
| #define HAVE_POSIX_LEAPSECONDS 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_STRUCT_STAT_ST_ATIMESPEC_TV_NSEC 1
| #define HAVE_SETITIMER 1
| #define R_PROFILING 1
| #define HAVE_FSEEKO 1
| #define NVALGRIND 1
| #define VALGRIND_LEVEL 0
| #define HAVE_KERN_USRSTACK 1
| #define R_PRINTCMD "lpr"
| #define HAVE_VISIBILITY 1
| #define HAVE_STDINT_H_WITH_UINTMAX 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define INTDIV0_RAISES_SIGFPE 1
| #define HAVE_INTTYPES_H_WITH_UINTMAX 1
| #define HAVE_UNSIGNED_LONG_LONG_INT 1
| #define HAVE_UNSIGNED_LONG_LONG 1
| #define HAVE_UINTMAX_T 1
| #define HAVE_INTTYPES_H 1
| /* end confdefs.h. */
| extern void xyzzy ();
| #pragma weak xyzzy
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
| xyzzy();
| ;
| return 0;
| }
configure:39791: result: no
configure:40609: checking for multithread API to use
configure:40611: result: none
configure:40647: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:40647: $? = 0
configure:40658: checking argz.h usability
configure:40658: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
conftest.c:286:10: fatal error: 'argz.h' file not found
#include <argz.h>
^
1 error generated.
configure:40658: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| #define HAVE_ICONV 1
| #define HAVE_ICONVLIST 1
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_WCHAR_H 1
| #define HAVE_WCTYPE_H 1
| #define HAVE_MBRTOWC 1
| #define HAVE_WCRTOMB 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSTOD 1
| #define HAVE_MBSTOWCS 1
| #define HAVE_WCSTOMBS 1
| #define HAVE_WCTRANS 1
| #define HAVE_ISWBLANK 1
| #define HAVE_WCTYPE 1
| #define HAVE_ISWCTYPE 1
| #define HAVE_WCTRANS_T 1
| #define HAVE_MBSTATE_T 1
| #define HAVE_LIBICUCORE 1
| #define USE_ICU_APPLE 1
| #define USE_ICU 1
| #define HAVE_X11 1
| #define HAVE_KEYSYM 1
| #define HAVE_X11_Xmu 1
| #define HAVE_WORKING_CAIRO 1
| #define HAVE_CAIRO_PDF 1
| #define HAVE_CAIRO_PS 1
| #define HAVE_CAIRO_SVG 1
| #define HAVE_COREFOUNDATION_FW 1
| #define HAVE_AQUA 1
| #define HAVE_TCLTK 1
| #define HAVE_BSD_NETWORKING 1
| #define HAVE_SOCKETS 1
| #define HAVE_INTERNET 1
| #define SUPPORT_LIBXML 1
| #define HAVE_JPEG 1
| #define HAVE_PNG 1
| #define HAVE_TIFFIO_H 1
| #define HAVE_TIFF 1
| #define HAVE_LZMA_H 1
| #define HAVE_LZMA 1
| #define HAVE_POSIX_LEAPSECONDS 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_STRUCT_STAT_ST_ATIMESPEC_TV_NSEC 1
| #define HAVE_SETITIMER 1
| #define R_PROFILING 1
| #define HAVE_FSEEKO 1
| #define NVALGRIND 1
| #define VALGRIND_LEVEL 0
| #define HAVE_KERN_USRSTACK 1
| #define R_PRINTCMD "lpr"
| #define HAVE_VISIBILITY 1
| #define HAVE_STDINT_H_WITH_UINTMAX 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define INTDIV0_RAISES_SIGFPE 1
| #define HAVE_INTTYPES_H_WITH_UINTMAX 1
| #define HAVE_UNSIGNED_LONG_LONG_INT 1
| #define HAVE_UNSIGNED_LONG_LONG 1
| #define HAVE_UINTMAX_T 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_BUILTIN_EXPECT 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <argz.h>
configure:40658: result: no
configure:40658: checking argz.h presence
configure:40658: cc -E -I/usr/local/include conftest.c
conftest.c:253:10: fatal error: 'argz.h' file not found
#include <argz.h>
^
1 error generated.
configure:40658: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| #define HAVE_ICONV 1
| #define HAVE_ICONVLIST 1
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_WCHAR_H 1
| #define HAVE_WCTYPE_H 1
| #define HAVE_MBRTOWC 1
| #define HAVE_WCRTOMB 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSTOD 1
| #define HAVE_MBSTOWCS 1
| #define HAVE_WCSTOMBS 1
| #define HAVE_WCTRANS 1
| #define HAVE_ISWBLANK 1
| #define HAVE_WCTYPE 1
| #define HAVE_ISWCTYPE 1
| #define HAVE_WCTRANS_T 1
| #define HAVE_MBSTATE_T 1
| #define HAVE_LIBICUCORE 1
| #define USE_ICU_APPLE 1
| #define USE_ICU 1
| #define HAVE_X11 1
| #define HAVE_KEYSYM 1
| #define HAVE_X11_Xmu 1
| #define HAVE_WORKING_CAIRO 1
| #define HAVE_CAIRO_PDF 1
| #define HAVE_CAIRO_PS 1
| #define HAVE_CAIRO_SVG 1
| #define HAVE_COREFOUNDATION_FW 1
| #define HAVE_AQUA 1
| #define HAVE_TCLTK 1
| #define HAVE_BSD_NETWORKING 1
| #define HAVE_SOCKETS 1
| #define HAVE_INTERNET 1
| #define SUPPORT_LIBXML 1
| #define HAVE_JPEG 1
| #define HAVE_PNG 1
| #define HAVE_TIFFIO_H 1
| #define HAVE_TIFF 1
| #define HAVE_LZMA_H 1
| #define HAVE_LZMA 1
| #define HAVE_POSIX_LEAPSECONDS 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_STRUCT_STAT_ST_ATIMESPEC_TV_NSEC 1
| #define HAVE_SETITIMER 1
| #define R_PROFILING 1
| #define HAVE_FSEEKO 1
| #define NVALGRIND 1
| #define VALGRIND_LEVEL 0
| #define HAVE_KERN_USRSTACK 1
| #define R_PRINTCMD "lpr"
| #define HAVE_VISIBILITY 1
| #define HAVE_STDINT_H_WITH_UINTMAX 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define INTDIV0_RAISES_SIGFPE 1
| #define HAVE_INTTYPES_H_WITH_UINTMAX 1
| #define HAVE_UNSIGNED_LONG_LONG_INT 1
| #define HAVE_UNSIGNED_LONG_LONG 1
| #define HAVE_UINTMAX_T 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_BUILTIN_EXPECT 1
| /* end confdefs.h. */
| #include <argz.h>
configure:40658: result: no
configure:40658: checking for argz.h
configure:40658: result: no
configure:40658: checking for inttypes.h
configure:40658: result: yes
configure:40658: checking for limits.h
configure:40658: result: yes
configure:40658: checking for unistd.h
configure:40658: result: yes
configure:40658: checking for sys/param.h
configure:40658: result: yes
configure:40673: checking for getcwd
configure:40673: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:40673: $? = 0
configure:40673: result: yes
configure:40673: checking for getegid
configure:40673: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:40673: $? = 0
configure:40673: result: yes
configure:40673: checking for geteuid
configure:40673: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:40673: $? = 0
configure:40673: result: yes
configure:40673: checking for getgid
configure:40673: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:40673: $? = 0
configure:40673: result: yes
configure:40673: checking for getuid
configure:40673: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:40673: $? = 0
configure:40673: result: yes
configure:40673: checking for mempcpy
configure:40673: result: no
configure:40673: checking for munmap
configure:40673: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:40673: $? = 0
configure:40673: result: yes
configure:40673: checking for stpcpy
configure:40673: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
conftest.c:286:6: warning: incompatible redeclaration of library function 'stpcpy'
char stpcpy ();
^
conftest.c:286:6: note: 'stpcpy' is a builtin with type 'char *(char *, const char *)'
1 warning generated.
configure:40673: $? = 0
configure:40673: result: yes
configure:40673: checking for strcasecmp
configure:40673: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
conftest.c:287:6: warning: incompatible redeclaration of library function 'strcasecmp'
char strcasecmp ();
^
conftest.c:287:6: note: 'strcasecmp' is a builtin with type 'int (const char *, const char *)'
1 warning generated.
configure:40673: $? = 0
configure:40673: result: yes
configure:40673: checking for strdup
configure:40673: result: yes
configure:40673: checking for strtoul
configure:40673: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:40673: $? = 0
configure:40673: result: yes
configure:40673: checking for tsearch
configure:40673: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:40673: $? = 0
configure:40673: result: yes
configure:40673: checking for argz_count
configure:40673: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
Undefined symbols for architecture x86_64:
"_argz_count", referenced from:
_main in conftest-15RR7U.o
ld: symbol(s) not found for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
configure:40673: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| #define HAVE_ICONV 1
| #define HAVE_ICONVLIST 1
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_WCHAR_H 1
| #define HAVE_WCTYPE_H 1
| #define HAVE_MBRTOWC 1
| #define HAVE_WCRTOMB 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSTOD 1
| #define HAVE_MBSTOWCS 1
| #define HAVE_WCSTOMBS 1
| #define HAVE_WCTRANS 1
| #define HAVE_ISWBLANK 1
| #define HAVE_WCTYPE 1
| #define HAVE_ISWCTYPE 1
| #define HAVE_WCTRANS_T 1
| #define HAVE_MBSTATE_T 1
| #define HAVE_LIBICUCORE 1
| #define USE_ICU_APPLE 1
| #define USE_ICU 1
| #define HAVE_X11 1
| #define HAVE_KEYSYM 1
| #define HAVE_X11_Xmu 1
| #define HAVE_WORKING_CAIRO 1
| #define HAVE_CAIRO_PDF 1
| #define HAVE_CAIRO_PS 1
| #define HAVE_CAIRO_SVG 1
| #define HAVE_COREFOUNDATION_FW 1
| #define HAVE_AQUA 1
| #define HAVE_TCLTK 1
| #define HAVE_BSD_NETWORKING 1
| #define HAVE_SOCKETS 1
| #define HAVE_INTERNET 1
| #define SUPPORT_LIBXML 1
| #define HAVE_JPEG 1
| #define HAVE_PNG 1
| #define HAVE_TIFFIO_H 1
| #define HAVE_TIFF 1
| #define HAVE_LZMA_H 1
| #define HAVE_LZMA 1
| #define HAVE_POSIX_LEAPSECONDS 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_STRUCT_STAT_ST_ATIMESPEC_TV_NSEC 1
| #define HAVE_SETITIMER 1
| #define R_PROFILING 1
| #define HAVE_FSEEKO 1
| #define NVALGRIND 1
| #define VALGRIND_LEVEL 0
| #define HAVE_KERN_USRSTACK 1
| #define R_PRINTCMD "lpr"
| #define HAVE_VISIBILITY 1
| #define HAVE_STDINT_H_WITH_UINTMAX 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define INTDIV0_RAISES_SIGFPE 1
| #define HAVE_INTTYPES_H_WITH_UINTMAX 1
| #define HAVE_UNSIGNED_LONG_LONG_INT 1
| #define HAVE_UNSIGNED_LONG_LONG 1
| #define HAVE_UINTMAX_T 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_BUILTIN_EXPECT 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEGID 1
| #define HAVE_GETEUID 1
| #define HAVE_GETGID 1
| #define HAVE_GETUID 1
| #define HAVE_MUNMAP 1
| #define HAVE_STPCPY 1
| #define HAVE_STRCASECMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRTOUL 1
| #define HAVE_TSEARCH 1
| /* end confdefs.h. */
| /* Define argz_count to an innocuous variant, in case <limits.h> declares argz_count.
| For example, HP-UX 11i <limits.h> declares gettimeofday. */
| #define argz_count innocuous_argz_count
|
| /* System header to define __stub macros and hopefully few prototypes,
| which can conflict with char argz_count (); below.
| Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
| <limits.h> exists even on freestanding compilers. */
|
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
|
| #undef argz_count
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char argz_count ();
| /* The GNU C library defines this for functions which it implements
| to always fail with ENOSYS. Some functions are actually named
| something starting with __ and the normal name is an alias. */
| #if defined __stub_argz_count || defined __stub___argz_count
| choke me
| #endif
|
| int
| main ()
| {
| return argz_count ();
| ;
| return 0;
| }
configure:40673: result: no
configure:40673: checking for argz_stringify
configure:40673: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
Undefined symbols for architecture x86_64:
"_argz_stringify", referenced from:
_main in conftest-PMjBse.o
ld: symbol(s) not found for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
configure:40673: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| #define HAVE_ICONV 1
| #define HAVE_ICONVLIST 1
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_WCHAR_H 1
| #define HAVE_WCTYPE_H 1
| #define HAVE_MBRTOWC 1
| #define HAVE_WCRTOMB 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSTOD 1
| #define HAVE_MBSTOWCS 1
| #define HAVE_WCSTOMBS 1
| #define HAVE_WCTRANS 1
| #define HAVE_ISWBLANK 1
| #define HAVE_WCTYPE 1
| #define HAVE_ISWCTYPE 1
| #define HAVE_WCTRANS_T 1
| #define HAVE_MBSTATE_T 1
| #define HAVE_LIBICUCORE 1
| #define USE_ICU_APPLE 1
| #define USE_ICU 1
| #define HAVE_X11 1
| #define HAVE_KEYSYM 1
| #define HAVE_X11_Xmu 1
| #define HAVE_WORKING_CAIRO 1
| #define HAVE_CAIRO_PDF 1
| #define HAVE_CAIRO_PS 1
| #define HAVE_CAIRO_SVG 1
| #define HAVE_COREFOUNDATION_FW 1
| #define HAVE_AQUA 1
| #define HAVE_TCLTK 1
| #define HAVE_BSD_NETWORKING 1
| #define HAVE_SOCKETS 1
| #define HAVE_INTERNET 1
| #define SUPPORT_LIBXML 1
| #define HAVE_JPEG 1
| #define HAVE_PNG 1
| #define HAVE_TIFFIO_H 1
| #define HAVE_TIFF 1
| #define HAVE_LZMA_H 1
| #define HAVE_LZMA 1
| #define HAVE_POSIX_LEAPSECONDS 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_STRUCT_STAT_ST_ATIMESPEC_TV_NSEC 1
| #define HAVE_SETITIMER 1
| #define R_PROFILING 1
| #define HAVE_FSEEKO 1
| #define NVALGRIND 1
| #define VALGRIND_LEVEL 0
| #define HAVE_KERN_USRSTACK 1
| #define R_PRINTCMD "lpr"
| #define HAVE_VISIBILITY 1
| #define HAVE_STDINT_H_WITH_UINTMAX 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define INTDIV0_RAISES_SIGFPE 1
| #define HAVE_INTTYPES_H_WITH_UINTMAX 1
| #define HAVE_UNSIGNED_LONG_LONG_INT 1
| #define HAVE_UNSIGNED_LONG_LONG 1
| #define HAVE_UINTMAX_T 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_BUILTIN_EXPECT 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEGID 1
| #define HAVE_GETEUID 1
| #define HAVE_GETGID 1
| #define HAVE_GETUID 1
| #define HAVE_MUNMAP 1
| #define HAVE_STPCPY 1
| #define HAVE_STRCASECMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRTOUL 1
| #define HAVE_TSEARCH 1
| /* end confdefs.h. */
| /* Define argz_stringify to an innocuous variant, in case <limits.h> declares argz_stringify.
| For example, HP-UX 11i <limits.h> declares gettimeofday. */
| #define argz_stringify innocuous_argz_stringify
|
| /* System header to define __stub macros and hopefully few prototypes,
| which can conflict with char argz_stringify (); below.
| Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
| <limits.h> exists even on freestanding compilers. */
|
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
|
| #undef argz_stringify
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char argz_stringify ();
| /* The GNU C library defines this for functions which it implements
| to always fail with ENOSYS. Some functions are actually named
| something starting with __ and the normal name is an alias. */
| #if defined __stub_argz_stringify || defined __stub___argz_stringify
| choke me
| #endif
|
| int
| main ()
| {
| return argz_stringify ();
| ;
| return 0;
| }
configure:40673: result: no
configure:40673: checking for argz_next
configure:40673: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
Undefined symbols for architecture x86_64:
"_argz_next", referenced from:
_main in conftest-1qWIri.o
ld: symbol(s) not found for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
configure:40673: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| #define HAVE_ICONV 1
| #define HAVE_ICONVLIST 1
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_WCHAR_H 1
| #define HAVE_WCTYPE_H 1
| #define HAVE_MBRTOWC 1
| #define HAVE_WCRTOMB 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSTOD 1
| #define HAVE_MBSTOWCS 1
| #define HAVE_WCSTOMBS 1
| #define HAVE_WCTRANS 1
| #define HAVE_ISWBLANK 1
| #define HAVE_WCTYPE 1
| #define HAVE_ISWCTYPE 1
| #define HAVE_WCTRANS_T 1
| #define HAVE_MBSTATE_T 1
| #define HAVE_LIBICUCORE 1
| #define USE_ICU_APPLE 1
| #define USE_ICU 1
| #define HAVE_X11 1
| #define HAVE_KEYSYM 1
| #define HAVE_X11_Xmu 1
| #define HAVE_WORKING_CAIRO 1
| #define HAVE_CAIRO_PDF 1
| #define HAVE_CAIRO_PS 1
| #define HAVE_CAIRO_SVG 1
| #define HAVE_COREFOUNDATION_FW 1
| #define HAVE_AQUA 1
| #define HAVE_TCLTK 1
| #define HAVE_BSD_NETWORKING 1
| #define HAVE_SOCKETS 1
| #define HAVE_INTERNET 1
| #define SUPPORT_LIBXML 1
| #define HAVE_JPEG 1
| #define HAVE_PNG 1
| #define HAVE_TIFFIO_H 1
| #define HAVE_TIFF 1
| #define HAVE_LZMA_H 1
| #define HAVE_LZMA 1
| #define HAVE_POSIX_LEAPSECONDS 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_STRUCT_STAT_ST_ATIMESPEC_TV_NSEC 1
| #define HAVE_SETITIMER 1
| #define R_PROFILING 1
| #define HAVE_FSEEKO 1
| #define NVALGRIND 1
| #define VALGRIND_LEVEL 0
| #define HAVE_KERN_USRSTACK 1
| #define R_PRINTCMD "lpr"
| #define HAVE_VISIBILITY 1
| #define HAVE_STDINT_H_WITH_UINTMAX 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define INTDIV0_RAISES_SIGFPE 1
| #define HAVE_INTTYPES_H_WITH_UINTMAX 1
| #define HAVE_UNSIGNED_LONG_LONG_INT 1
| #define HAVE_UNSIGNED_LONG_LONG 1
| #define HAVE_UINTMAX_T 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_BUILTIN_EXPECT 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEGID 1
| #define HAVE_GETEUID 1
| #define HAVE_GETGID 1
| #define HAVE_GETUID 1
| #define HAVE_MUNMAP 1
| #define HAVE_STPCPY 1
| #define HAVE_STRCASECMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRTOUL 1
| #define HAVE_TSEARCH 1
| /* end confdefs.h. */
| /* Define argz_next to an innocuous variant, in case <limits.h> declares argz_next.
| For example, HP-UX 11i <limits.h> declares gettimeofday. */
| #define argz_next innocuous_argz_next
|
| /* System header to define __stub macros and hopefully few prototypes,
| which can conflict with char argz_next (); below.
| Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
| <limits.h> exists even on freestanding compilers. */
|
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
|
| #undef argz_next
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char argz_next ();
| /* The GNU C library defines this for functions which it implements
| to always fail with ENOSYS. Some functions are actually named
| something starting with __ and the normal name is an alias. */
| #if defined __stub_argz_next || defined __stub___argz_next
| choke me
| #endif
|
| int
| main ()
| {
| return argz_next ();
| ;
| return 0;
| }
configure:40673: result: no
configure:40673: checking for __fsetlocking
configure:40673: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
Undefined symbols for architecture x86_64:
"___fsetlocking", referenced from:
_main in conftest-eTJGzz.o
ld: symbol(s) not found for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
configure:40673: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| #define HAVE_ICONV 1
| #define HAVE_ICONVLIST 1
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_WCHAR_H 1
| #define HAVE_WCTYPE_H 1
| #define HAVE_MBRTOWC 1
| #define HAVE_WCRTOMB 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSTOD 1
| #define HAVE_MBSTOWCS 1
| #define HAVE_WCSTOMBS 1
| #define HAVE_WCTRANS 1
| #define HAVE_ISWBLANK 1
| #define HAVE_WCTYPE 1
| #define HAVE_ISWCTYPE 1
| #define HAVE_WCTRANS_T 1
| #define HAVE_MBSTATE_T 1
| #define HAVE_LIBICUCORE 1
| #define USE_ICU_APPLE 1
| #define USE_ICU 1
| #define HAVE_X11 1
| #define HAVE_KEYSYM 1
| #define HAVE_X11_Xmu 1
| #define HAVE_WORKING_CAIRO 1
| #define HAVE_CAIRO_PDF 1
| #define HAVE_CAIRO_PS 1
| #define HAVE_CAIRO_SVG 1
| #define HAVE_COREFOUNDATION_FW 1
| #define HAVE_AQUA 1
| #define HAVE_TCLTK 1
| #define HAVE_BSD_NETWORKING 1
| #define HAVE_SOCKETS 1
| #define HAVE_INTERNET 1
| #define SUPPORT_LIBXML 1
| #define HAVE_JPEG 1
| #define HAVE_PNG 1
| #define HAVE_TIFFIO_H 1
| #define HAVE_TIFF 1
| #define HAVE_LZMA_H 1
| #define HAVE_LZMA 1
| #define HAVE_POSIX_LEAPSECONDS 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_STRUCT_STAT_ST_ATIMESPEC_TV_NSEC 1
| #define HAVE_SETITIMER 1
| #define R_PROFILING 1
| #define HAVE_FSEEKO 1
| #define NVALGRIND 1
| #define VALGRIND_LEVEL 0
| #define HAVE_KERN_USRSTACK 1
| #define R_PRINTCMD "lpr"
| #define HAVE_VISIBILITY 1
| #define HAVE_STDINT_H_WITH_UINTMAX 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define INTDIV0_RAISES_SIGFPE 1
| #define HAVE_INTTYPES_H_WITH_UINTMAX 1
| #define HAVE_UNSIGNED_LONG_LONG_INT 1
| #define HAVE_UNSIGNED_LONG_LONG 1
| #define HAVE_UINTMAX_T 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_BUILTIN_EXPECT 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEGID 1
| #define HAVE_GETEUID 1
| #define HAVE_GETGID 1
| #define HAVE_GETUID 1
| #define HAVE_MUNMAP 1
| #define HAVE_STPCPY 1
| #define HAVE_STRCASECMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRTOUL 1
| #define HAVE_TSEARCH 1
| /* end confdefs.h. */
| /* Define __fsetlocking to an innocuous variant, in case <limits.h> declares __fsetlocking.
| For example, HP-UX 11i <limits.h> declares gettimeofday. */
| #define __fsetlocking innocuous___fsetlocking
|
| /* System header to define __stub macros and hopefully few prototypes,
| which can conflict with char __fsetlocking (); below.
| Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
| <limits.h> exists even on freestanding compilers. */
|
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
|
| #undef __fsetlocking
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char __fsetlocking ();
| /* The GNU C library defines this for functions which it implements
| to always fail with ENOSYS. Some functions are actually named
| something starting with __ and the normal name is an alias. */
| #if defined __stub___fsetlocking || defined __stub_____fsetlocking
| choke me
| #endif
|
| int
| main ()
| {
| return __fsetlocking ();
| ;
| return 0;
| }
configure:40673: result: no
configure:40684: checking whether feof_unlocked is declared
configure:40712: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:40712: $? = 0
configure:40719: result: yes
configure:40733: checking whether fgets_unlocked is declared
configure:40761: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
conftest.c:283:22: error: use of undeclared identifier 'fgets_unlocked'
char *p = (char *) fgets_unlocked;
^
1 error generated.
configure:40761: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| #define HAVE_ICONV 1
| #define HAVE_ICONVLIST 1
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_WCHAR_H 1
| #define HAVE_WCTYPE_H 1
| #define HAVE_MBRTOWC 1
| #define HAVE_WCRTOMB 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSTOD 1
| #define HAVE_MBSTOWCS 1
| #define HAVE_WCSTOMBS 1
| #define HAVE_WCTRANS 1
| #define HAVE_ISWBLANK 1
| #define HAVE_WCTYPE 1
| #define HAVE_ISWCTYPE 1
| #define HAVE_WCTRANS_T 1
| #define HAVE_MBSTATE_T 1
| #define HAVE_LIBICUCORE 1
| #define USE_ICU_APPLE 1
| #define USE_ICU 1
| #define HAVE_X11 1
| #define HAVE_KEYSYM 1
| #define HAVE_X11_Xmu 1
| #define HAVE_WORKING_CAIRO 1
| #define HAVE_CAIRO_PDF 1
| #define HAVE_CAIRO_PS 1
| #define HAVE_CAIRO_SVG 1
| #define HAVE_COREFOUNDATION_FW 1
| #define HAVE_AQUA 1
| #define HAVE_TCLTK 1
| #define HAVE_BSD_NETWORKING 1
| #define HAVE_SOCKETS 1
| #define HAVE_INTERNET 1
| #define SUPPORT_LIBXML 1
| #define HAVE_JPEG 1
| #define HAVE_PNG 1
| #define HAVE_TIFFIO_H 1
| #define HAVE_TIFF 1
| #define HAVE_LZMA_H 1
| #define HAVE_LZMA 1
| #define HAVE_POSIX_LEAPSECONDS 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_STRUCT_STAT_ST_ATIMESPEC_TV_NSEC 1
| #define HAVE_SETITIMER 1
| #define R_PROFILING 1
| #define HAVE_FSEEKO 1
| #define NVALGRIND 1
| #define VALGRIND_LEVEL 0
| #define HAVE_KERN_USRSTACK 1
| #define R_PRINTCMD "lpr"
| #define HAVE_VISIBILITY 1
| #define HAVE_STDINT_H_WITH_UINTMAX 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define INTDIV0_RAISES_SIGFPE 1
| #define HAVE_INTTYPES_H_WITH_UINTMAX 1
| #define HAVE_UNSIGNED_LONG_LONG_INT 1
| #define HAVE_UNSIGNED_LONG_LONG 1
| #define HAVE_UINTMAX_T 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_BUILTIN_EXPECT 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEGID 1
| #define HAVE_GETEUID 1
| #define HAVE_GETGID 1
| #define HAVE_GETUID 1
| #define HAVE_MUNMAP 1
| #define HAVE_STPCPY 1
| #define HAVE_STRCASECMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRTOUL 1
| #define HAVE_TSEARCH 1
| #define HAVE_DECL_FEOF_UNLOCKED 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
|
| #ifndef fgets_unlocked
| char *p = (char *) fgets_unlocked;
| #endif
|
| ;
| return 0;
| }
configure:40768: result: no
configure:40811: checking for iconv
configure:40881: result: yes
configure:40902: checking for iconv declaration
configure:40950: result:
extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft);
configure:40961: checking for NL_LOCALE_NAME macro
configure:40986: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
conftest.c:285:24: warning: implicit declaration of function '_NL_LOCALE_NAME' is invalid in C99 [-Wimplicit-function-declaration]
char* cs = nl_langinfo(_NL_LOCALE_NAME(LC_MESSAGES));
^
1 warning generated.
Undefined symbols for architecture x86_64:
"__NL_LOCALE_NAME", referenced from:
_main in conftest-fI9UyD.o
ld: symbol(s) not found for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
configure:40986: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| #define HAVE_ICONV 1
| #define HAVE_ICONVLIST 1
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_WCHAR_H 1
| #define HAVE_WCTYPE_H 1
| #define HAVE_MBRTOWC 1
| #define HAVE_WCRTOMB 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSTOD 1
| #define HAVE_MBSTOWCS 1
| #define HAVE_WCSTOMBS 1
| #define HAVE_WCTRANS 1
| #define HAVE_ISWBLANK 1
| #define HAVE_WCTYPE 1
| #define HAVE_ISWCTYPE 1
| #define HAVE_WCTRANS_T 1
| #define HAVE_MBSTATE_T 1
| #define HAVE_LIBICUCORE 1
| #define USE_ICU_APPLE 1
| #define USE_ICU 1
| #define HAVE_X11 1
| #define HAVE_KEYSYM 1
| #define HAVE_X11_Xmu 1
| #define HAVE_WORKING_CAIRO 1
| #define HAVE_CAIRO_PDF 1
| #define HAVE_CAIRO_PS 1
| #define HAVE_CAIRO_SVG 1
| #define HAVE_COREFOUNDATION_FW 1
| #define HAVE_AQUA 1
| #define HAVE_TCLTK 1
| #define HAVE_BSD_NETWORKING 1
| #define HAVE_SOCKETS 1
| #define HAVE_INTERNET 1
| #define SUPPORT_LIBXML 1
| #define HAVE_JPEG 1
| #define HAVE_PNG 1
| #define HAVE_TIFFIO_H 1
| #define HAVE_TIFF 1
| #define HAVE_LZMA_H 1
| #define HAVE_LZMA 1
| #define HAVE_POSIX_LEAPSECONDS 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_STRUCT_STAT_ST_ATIMESPEC_TV_NSEC 1
| #define HAVE_SETITIMER 1
| #define R_PROFILING 1
| #define HAVE_FSEEKO 1
| #define NVALGRIND 1
| #define VALGRIND_LEVEL 0
| #define HAVE_KERN_USRSTACK 1
| #define R_PRINTCMD "lpr"
| #define HAVE_VISIBILITY 1
| #define HAVE_STDINT_H_WITH_UINTMAX 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define INTDIV0_RAISES_SIGFPE 1
| #define HAVE_INTTYPES_H_WITH_UINTMAX 1
| #define HAVE_UNSIGNED_LONG_LONG_INT 1
| #define HAVE_UNSIGNED_LONG_LONG 1
| #define HAVE_UINTMAX_T 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_BUILTIN_EXPECT 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEGID 1
| #define HAVE_GETEUID 1
| #define HAVE_GETGID 1
| #define HAVE_GETUID 1
| #define HAVE_MUNMAP 1
| #define HAVE_STPCPY 1
| #define HAVE_STRCASECMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRTOUL 1
| #define HAVE_TSEARCH 1
| #define HAVE_DECL_FEOF_UNLOCKED 1
| #define HAVE_DECL_FGETS_UNLOCKED 0
| #define HAVE_ICONV 1
| #define ICONV_CONST
| /* end confdefs.h. */
| #include <langinfo.h>
| #include <locale.h>
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
| char* cs = nl_langinfo(_NL_LOCALE_NAME(LC_MESSAGES));
| ;
| return 0;
| }
configure:40995: result: no
configure:41007: checking for bison
configure:41023: found /usr/bin/bison
configure:41034: result: bison
configure:41048: checking version of bison
configure:41057: result: 2.3, ok
configure:41065: checking for long long int
configure:41096: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:41096: $? = 0
configure:41104: result: yes
configure:41113: checking for long double
configure:41153: result: yes
configure:41162: checking for wchar_t
configure:41187: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:41187: $? = 0
configure:41194: result: yes
configure:41203: checking for wint_t
configure:41228: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:41228: $? = 0
configure:41235: result: yes
configure:41246: checking for intmax_t
configure:41280: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:41280: $? = 0
configure:41287: result: yes
configure:41297: checking whether printf() supports POSIX/XSI format strings
configure:41338: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:41338: $? = 0
configure:41338: ./conftest
configure:41338: $? = 0
configure:41349: result: yes
configure:41360: checking whether we are using the GNU C Library 2.1 or newer
conftest.c:279:10: fatal error: 'features.h' file not found
#include <features.h>
^
1 error generated.
configure:41387: result: no
configure:41396: checking for stdint.h
configure:41396: result: yes
configure:41406: checking for SIZE_MAX
configure:41488: result: yes
configure:41503: checking for stdint.h
configure:41503: result: yes
configure:41515: checking for CFPreferencesCopyAppValue
configure:41541: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv -Wl,-framework -Wl,CoreFoundation >&5
configure:41541: $? = 0
configure:41550: result: yes
configure:41557: checking for CFLocaleCopyCurrent
configure:41583: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv -Wl,-framework -Wl,CoreFoundation >&5
configure:41583: $? = 0
configure:41592: result: yes
configure:41610: checking for ptrdiff_t
configure:41610: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:41610: $? = 0
configure:41610: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
conftest.c:318:24: error: expected expression
if (sizeof ((ptrdiff_t)))
^
1 error generated.
configure:41610: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| #define HAVE_ICONV 1
| #define HAVE_ICONVLIST 1
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_WCHAR_H 1
| #define HAVE_WCTYPE_H 1
| #define HAVE_MBRTOWC 1
| #define HAVE_WCRTOMB 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSTOD 1
| #define HAVE_MBSTOWCS 1
| #define HAVE_WCSTOMBS 1
| #define HAVE_WCTRANS 1
| #define HAVE_ISWBLANK 1
| #define HAVE_WCTYPE 1
| #define HAVE_ISWCTYPE 1
| #define HAVE_WCTRANS_T 1
| #define HAVE_MBSTATE_T 1
| #define HAVE_LIBICUCORE 1
| #define USE_ICU_APPLE 1
| #define USE_ICU 1
| #define HAVE_X11 1
| #define HAVE_KEYSYM 1
| #define HAVE_X11_Xmu 1
| #define HAVE_WORKING_CAIRO 1
| #define HAVE_CAIRO_PDF 1
| #define HAVE_CAIRO_PS 1
| #define HAVE_CAIRO_SVG 1
| #define HAVE_COREFOUNDATION_FW 1
| #define HAVE_AQUA 1
| #define HAVE_TCLTK 1
| #define HAVE_BSD_NETWORKING 1
| #define HAVE_SOCKETS 1
| #define HAVE_INTERNET 1
| #define SUPPORT_LIBXML 1
| #define HAVE_JPEG 1
| #define HAVE_PNG 1
| #define HAVE_TIFFIO_H 1
| #define HAVE_TIFF 1
| #define HAVE_LZMA_H 1
| #define HAVE_LZMA 1
| #define HAVE_POSIX_LEAPSECONDS 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_STRUCT_STAT_ST_ATIMESPEC_TV_NSEC 1
| #define HAVE_SETITIMER 1
| #define R_PROFILING 1
| #define HAVE_FSEEKO 1
| #define NVALGRIND 1
| #define VALGRIND_LEVEL 0
| #define HAVE_KERN_USRSTACK 1
| #define R_PRINTCMD "lpr"
| #define HAVE_VISIBILITY 1
| #define HAVE_STDINT_H_WITH_UINTMAX 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define INTDIV0_RAISES_SIGFPE 1
| #define HAVE_INTTYPES_H_WITH_UINTMAX 1
| #define HAVE_UNSIGNED_LONG_LONG_INT 1
| #define HAVE_UNSIGNED_LONG_LONG 1
| #define HAVE_UINTMAX_T 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_BUILTIN_EXPECT 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEGID 1
| #define HAVE_GETEUID 1
| #define HAVE_GETGID 1
| #define HAVE_GETUID 1
| #define HAVE_MUNMAP 1
| #define HAVE_STPCPY 1
| #define HAVE_STRCASECMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRTOUL 1
| #define HAVE_TSEARCH 1
| #define HAVE_DECL_FEOF_UNLOCKED 1
| #define HAVE_DECL_FGETS_UNLOCKED 0
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_LONG_LONG_INT 1
| #define HAVE_LONG_DOUBLE 1
| #define HAVE_WCHAR_T 1
| #define HAVE_WINT_T 1
| #define HAVE_INTMAX_T 1
| #define HAVE_POSIX_PRINTF 1
| #define HAVE_STDINT_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_CFPREFERENCESCOPYAPPVALUE 1
| #define HAVE_CFLOCALECOPYCURRENT 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
| if (sizeof ((ptrdiff_t)))
| return 0;
| ;
| return 0;
| }
configure:41610: result: yes
configure:41623: checking stddef.h usability
configure:41623: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:41623: $? = 0
configure:41623: result: yes
configure:41623: checking stddef.h presence
configure:41623: cc -E -I/usr/local/include conftest.c
configure:41623: $? = 0
configure:41623: result: yes
configure:41623: checking for stddef.h
configure:41623: result: yes
configure:41623: checking for stdlib.h
configure:41623: result: yes
configure:41623: checking for string.h
configure:41623: result: yes
configure:41636: checking for asprintf
configure:41636: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
conftest.c:319:18: warning: format string missing [-Wformat]
return asprintf ();
~~~~~~~~ ^
1 warning generated.
configure:41636: $? = 0
configure:41636: result: yes
configure:41636: checking for fwprintf
configure:41636: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:41636: $? = 0
configure:41636: result: yes
configure:41636: checking for putenv
configure:41636: result: yes
configure:41636: checking for setenv
configure:41636: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:41636: $? = 0
configure:41636: result: yes
configure:41636: checking for setlocale
configure:41636: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:41636: $? = 0
configure:41636: result: yes
configure:41636: checking for snprintf
configure:41636: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
conftest.c:313:6: warning: incompatible redeclaration of library function 'snprintf'
char snprintf ();
^
conftest.c:313:6: note: 'snprintf' is a builtin with type 'int (char *, unsigned long, const char *, ...)'
1 warning generated.
configure:41636: $? = 0
configure:41636: result: yes
configure:41636: checking for wcslen
configure:41636: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:41636: $? = 0
configure:41636: result: yes
configure:41647: checking whether _snprintf is declared
configure:41675: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
conftest.c:306:22: error: use of undeclared identifier '_snprintf'
char *p = (char *) _snprintf;
^
1 error generated.
configure:41675: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| #define HAVE_ICONV 1
| #define HAVE_ICONVLIST 1
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_WCHAR_H 1
| #define HAVE_WCTYPE_H 1
| #define HAVE_MBRTOWC 1
| #define HAVE_WCRTOMB 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSTOD 1
| #define HAVE_MBSTOWCS 1
| #define HAVE_WCSTOMBS 1
| #define HAVE_WCTRANS 1
| #define HAVE_ISWBLANK 1
| #define HAVE_WCTYPE 1
| #define HAVE_ISWCTYPE 1
| #define HAVE_WCTRANS_T 1
| #define HAVE_MBSTATE_T 1
| #define HAVE_LIBICUCORE 1
| #define USE_ICU_APPLE 1
| #define USE_ICU 1
| #define HAVE_X11 1
| #define HAVE_KEYSYM 1
| #define HAVE_X11_Xmu 1
| #define HAVE_WORKING_CAIRO 1
| #define HAVE_CAIRO_PDF 1
| #define HAVE_CAIRO_PS 1
| #define HAVE_CAIRO_SVG 1
| #define HAVE_COREFOUNDATION_FW 1
| #define HAVE_AQUA 1
| #define HAVE_TCLTK 1
| #define HAVE_BSD_NETWORKING 1
| #define HAVE_SOCKETS 1
| #define HAVE_INTERNET 1
| #define SUPPORT_LIBXML 1
| #define HAVE_JPEG 1
| #define HAVE_PNG 1
| #define HAVE_TIFFIO_H 1
| #define HAVE_TIFF 1
| #define HAVE_LZMA_H 1
| #define HAVE_LZMA 1
| #define HAVE_POSIX_LEAPSECONDS 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_STRUCT_STAT_ST_ATIMESPEC_TV_NSEC 1
| #define HAVE_SETITIMER 1
| #define R_PROFILING 1
| #define HAVE_FSEEKO 1
| #define NVALGRIND 1
| #define VALGRIND_LEVEL 0
| #define HAVE_KERN_USRSTACK 1
| #define R_PRINTCMD "lpr"
| #define HAVE_VISIBILITY 1
| #define HAVE_STDINT_H_WITH_UINTMAX 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define INTDIV0_RAISES_SIGFPE 1
| #define HAVE_INTTYPES_H_WITH_UINTMAX 1
| #define HAVE_UNSIGNED_LONG_LONG_INT 1
| #define HAVE_UNSIGNED_LONG_LONG 1
| #define HAVE_UINTMAX_T 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_BUILTIN_EXPECT 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEGID 1
| #define HAVE_GETEUID 1
| #define HAVE_GETGID 1
| #define HAVE_GETUID 1
| #define HAVE_MUNMAP 1
| #define HAVE_STPCPY 1
| #define HAVE_STRCASECMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRTOUL 1
| #define HAVE_TSEARCH 1
| #define HAVE_DECL_FEOF_UNLOCKED 1
| #define HAVE_DECL_FGETS_UNLOCKED 0
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_LONG_LONG_INT 1
| #define HAVE_LONG_DOUBLE 1
| #define HAVE_WCHAR_T 1
| #define HAVE_WINT_T 1
| #define HAVE_INTMAX_T 1
| #define HAVE_POSIX_PRINTF 1
| #define HAVE_STDINT_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_CFPREFERENCESCOPYAPPVALUE 1
| #define HAVE_CFLOCALECOPYCURRENT 1
| #define HAVE_STDDEF_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_ASPRINTF 1
| #define HAVE_FWPRINTF 1
| #define HAVE_PUTENV 1
| #define HAVE_SETENV 1
| #define HAVE_SETLOCALE 1
| #define HAVE_SNPRINTF 1
| #define HAVE_WCSLEN 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
|
| #ifndef _snprintf
| char *p = (char *) _snprintf;
| #endif
|
| ;
| return 0;
| }
configure:41682: result: no
configure:41696: checking whether _snwprintf is declared
configure:41724: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
conftest.c:307:22: error: use of undeclared identifier '_snwprintf'
char *p = (char *) _snwprintf;
^
1 error generated.
configure:41724: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| #define HAVE_ICONV 1
| #define HAVE_ICONVLIST 1
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_WCHAR_H 1
| #define HAVE_WCTYPE_H 1
| #define HAVE_MBRTOWC 1
| #define HAVE_WCRTOMB 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSTOD 1
| #define HAVE_MBSTOWCS 1
| #define HAVE_WCSTOMBS 1
| #define HAVE_WCTRANS 1
| #define HAVE_ISWBLANK 1
| #define HAVE_WCTYPE 1
| #define HAVE_ISWCTYPE 1
| #define HAVE_WCTRANS_T 1
| #define HAVE_MBSTATE_T 1
| #define HAVE_LIBICUCORE 1
| #define USE_ICU_APPLE 1
| #define USE_ICU 1
| #define HAVE_X11 1
| #define HAVE_KEYSYM 1
| #define HAVE_X11_Xmu 1
| #define HAVE_WORKING_CAIRO 1
| #define HAVE_CAIRO_PDF 1
| #define HAVE_CAIRO_PS 1
| #define HAVE_CAIRO_SVG 1
| #define HAVE_COREFOUNDATION_FW 1
| #define HAVE_AQUA 1
| #define HAVE_TCLTK 1
| #define HAVE_BSD_NETWORKING 1
| #define HAVE_SOCKETS 1
| #define HAVE_INTERNET 1
| #define SUPPORT_LIBXML 1
| #define HAVE_JPEG 1
| #define HAVE_PNG 1
| #define HAVE_TIFFIO_H 1
| #define HAVE_TIFF 1
| #define HAVE_LZMA_H 1
| #define HAVE_LZMA 1
| #define HAVE_POSIX_LEAPSECONDS 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_STRUCT_STAT_ST_ATIMESPEC_TV_NSEC 1
| #define HAVE_SETITIMER 1
| #define R_PROFILING 1
| #define HAVE_FSEEKO 1
| #define NVALGRIND 1
| #define VALGRIND_LEVEL 0
| #define HAVE_KERN_USRSTACK 1
| #define R_PRINTCMD "lpr"
| #define HAVE_VISIBILITY 1
| #define HAVE_STDINT_H_WITH_UINTMAX 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define INTDIV0_RAISES_SIGFPE 1
| #define HAVE_INTTYPES_H_WITH_UINTMAX 1
| #define HAVE_UNSIGNED_LONG_LONG_INT 1
| #define HAVE_UNSIGNED_LONG_LONG 1
| #define HAVE_UINTMAX_T 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_BUILTIN_EXPECT 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEGID 1
| #define HAVE_GETEUID 1
| #define HAVE_GETGID 1
| #define HAVE_GETUID 1
| #define HAVE_MUNMAP 1
| #define HAVE_STPCPY 1
| #define HAVE_STRCASECMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRTOUL 1
| #define HAVE_TSEARCH 1
| #define HAVE_DECL_FEOF_UNLOCKED 1
| #define HAVE_DECL_FGETS_UNLOCKED 0
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_LONG_LONG_INT 1
| #define HAVE_LONG_DOUBLE 1
| #define HAVE_WCHAR_T 1
| #define HAVE_WINT_T 1
| #define HAVE_INTMAX_T 1
| #define HAVE_POSIX_PRINTF 1
| #define HAVE_STDINT_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_CFPREFERENCESCOPYAPPVALUE 1
| #define HAVE_CFLOCALECOPYCURRENT 1
| #define HAVE_STDDEF_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_ASPRINTF 1
| #define HAVE_FWPRINTF 1
| #define HAVE_PUTENV 1
| #define HAVE_SETENV 1
| #define HAVE_SETLOCALE 1
| #define HAVE_SNPRINTF 1
| #define HAVE_WCSLEN 1
| #define HAVE_DECL__SNPRINTF 0
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
|
| #ifndef _snwprintf
| char *p = (char *) _snwprintf;
| #endif
|
| ;
| return 0;
| }
configure:41731: result: no
configure:41746: checking whether getc_unlocked is declared
configure:41774: cc -c -g -O2 -fPIC -I/usr/local/include conftest.c >&5
configure:41774: $? = 0
configure:41781: result: yes
configure:41820: checking for nl_langinfo and CODESET
configure:41853: result: yes
configure:41862: checking for LC_MESSAGES
configure:41886: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
configure:41886: $? = 0
configure:41894: result: yes
configure:41918: checking for shared library run path origin
configure:41931: result: done
configure:41963: checking for CFPreferencesCopyAppValue
configure:41998: result: yes
configure:42005: checking for CFLocaleCopyCurrent
configure:42040: result: yes
configure:42075: checking whether included gettext is requested
configure:42085: result: no
configure:42108: checking for GNU gettext in libc
configure:42136: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv >&5
conftest.c:299:10: fatal error: 'libintl.h' file not found
#include <libintl.h>
^
1 error generated.
configure:42136: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| #define HAVE_ICONV 1
| #define HAVE_ICONVLIST 1
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_WCHAR_H 1
| #define HAVE_WCTYPE_H 1
| #define HAVE_MBRTOWC 1
| #define HAVE_WCRTOMB 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSTOD 1
| #define HAVE_MBSTOWCS 1
| #define HAVE_WCSTOMBS 1
| #define HAVE_WCTRANS 1
| #define HAVE_ISWBLANK 1
| #define HAVE_WCTYPE 1
| #define HAVE_ISWCTYPE 1
| #define HAVE_WCTRANS_T 1
| #define HAVE_MBSTATE_T 1
| #define HAVE_LIBICUCORE 1
| #define USE_ICU_APPLE 1
| #define USE_ICU 1
| #define HAVE_X11 1
| #define HAVE_KEYSYM 1
| #define HAVE_X11_Xmu 1
| #define HAVE_WORKING_CAIRO 1
| #define HAVE_CAIRO_PDF 1
| #define HAVE_CAIRO_PS 1
| #define HAVE_CAIRO_SVG 1
| #define HAVE_COREFOUNDATION_FW 1
| #define HAVE_AQUA 1
| #define HAVE_TCLTK 1
| #define HAVE_BSD_NETWORKING 1
| #define HAVE_SOCKETS 1
| #define HAVE_INTERNET 1
| #define SUPPORT_LIBXML 1
| #define HAVE_JPEG 1
| #define HAVE_PNG 1
| #define HAVE_TIFFIO_H 1
| #define HAVE_TIFF 1
| #define HAVE_LZMA_H 1
| #define HAVE_LZMA 1
| #define HAVE_POSIX_LEAPSECONDS 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_STRUCT_STAT_ST_ATIMESPEC_TV_NSEC 1
| #define HAVE_SETITIMER 1
| #define R_PROFILING 1
| #define HAVE_FSEEKO 1
| #define NVALGRIND 1
| #define VALGRIND_LEVEL 0
| #define HAVE_KERN_USRSTACK 1
| #define R_PRINTCMD "lpr"
| #define HAVE_VISIBILITY 1
| #define HAVE_STDINT_H_WITH_UINTMAX 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define INTDIV0_RAISES_SIGFPE 1
| #define HAVE_INTTYPES_H_WITH_UINTMAX 1
| #define HAVE_UNSIGNED_LONG_LONG_INT 1
| #define HAVE_UNSIGNED_LONG_LONG 1
| #define HAVE_UINTMAX_T 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_BUILTIN_EXPECT 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEGID 1
| #define HAVE_GETEUID 1
| #define HAVE_GETGID 1
| #define HAVE_GETUID 1
| #define HAVE_MUNMAP 1
| #define HAVE_STPCPY 1
| #define HAVE_STRCASECMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRTOUL 1
| #define HAVE_TSEARCH 1
| #define HAVE_DECL_FEOF_UNLOCKED 1
| #define HAVE_DECL_FGETS_UNLOCKED 0
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_LONG_LONG_INT 1
| #define HAVE_LONG_DOUBLE 1
| #define HAVE_WCHAR_T 1
| #define HAVE_WINT_T 1
| #define HAVE_INTMAX_T 1
| #define HAVE_POSIX_PRINTF 1
| #define HAVE_STDINT_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_CFPREFERENCESCOPYAPPVALUE 1
| #define HAVE_CFLOCALECOPYCURRENT 1
| #define HAVE_STDDEF_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_ASPRINTF 1
| #define HAVE_FWPRINTF 1
| #define HAVE_PUTENV 1
| #define HAVE_SETENV 1
| #define HAVE_SETLOCALE 1
| #define HAVE_SNPRINTF 1
| #define HAVE_WCSLEN 1
| #define HAVE_DECL__SNPRINTF 0
| #define HAVE_DECL__SNWPRINTF 0
| #define HAVE_DECL_GETC_UNLOCKED 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_LC_MESSAGES 1
| #define HAVE_CFPREFERENCESCOPYAPPVALUE 1
| #define HAVE_CFLOCALECOPYCURRENT 1
| /* end confdefs.h. */
| #include <libintl.h>
|
| extern int _nl_msg_cat_cntr;
| extern int *_nl_domain_bindings;
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
| bindtextdomain ("", "");
| return * gettext ("") + * ngettext ("", "", 0) + _nl_msg_cat_cntr + *_nl_domain_bindings
| ;
| return 0;
| }
configure:42145: result: no
configure:42528: checking for GNU gettext in libintl
configure:42564: cc -o conftest -g -O2 -fPIC -I/usr/local/include -L/usr/local/lib conftest.c -llzma -licucore -lm -liconv -lintl >&5
conftest.c:299:10: fatal error: 'libintl.h' file not found
#include <libintl.h>
^
1 error generated.
configure:42564: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| #define F77_FUNC(name,NAME) name ## _
| #define F77_FUNC_(name,NAME) name ## _
| #define HAVE_F77_UNDERSCORE 1
| #define HAVE_FORTRAN_DOUBLE_COMPLEX 1
| #define OBJC_NEXT_RUNTIME 1
| #define HAVE_NO_SYMBOL_UNDERSCORE 1
| #define SHLIB_EXT ".so"
| #define HAVE_OFF_T 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ALLOCA 1
| #define HAVE_EXPM1 1
| #define HAVE_HYPOT 1
| #define HAVE_LOG1P 1
| #define HAVE_LOG2 1
| #define HAVE_LOG10 1
| #define HAVE_NEARBYINT 1
| #define HAVE_NEARBYINTL 1
| #define HAVE_POWL 1
| #define HAVE_RINT 1
| #define HAVE_RINTL 1
| #define HAVE_VA_COPY 1
| #define HAVE_ISBLANK 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_MATHERR 1
| #define HAVE_FCNTL 1
| #define HAVE_GETGRGID 1
| #define HAVE_GETPWUID 1
| #define HAVE_KILL 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGALTSTACK 1
| #define HAVE_SIGEMPTYSET 1
| #define HAVE_FDOPEN 1
| #define HAVE_POPEN 1
| #define HAVE_SETENV 1
| #define HAVE_UNSETENV 1
| #define HAVE_GETRLIMIT 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_GETPRIORITY 1
| #define HAVE_CHMOD 1
| #define HAVE_MKFIFO 1
| #define HAVE_STAT 1
| #define HAVE_UMASK 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_UTIMES 1
| #define HAVE_TIMES 1
| #define HAVE_ACCESS 1
| #define HAVE_CHDIR 1
| #define HAVE_EXECV 1
| #define HAVE_FTRUNCATE 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEUID 1
| #define HAVE_GETUID 1
| #define HAVE_LINK 1
| #define HAVE_READLINK 1
| #define HAVE_SYMLINK 1
| #define HAVE_SYSCONF 1
| #define HAVE_UTIME 1
| #define HAVE_PUTENV 1
| #define HAVE_DECL_PUTENV 1
| #define HAVE_VASPRINTF 1
| #define HAVE_DECL_VASPRINTF 1
| #define HAVE_REALPATH 1
| #define HAVE_DECL_REALPATH 1
| #define HAVE_GLOB 1
| #define HAVE_OFF_T 1
| #define HAVE_ISNAN 1
| #define HAVE_DECL_ISFINITE 1
| #define HAVE_DECL_ISNAN 1
| #define IEEE_754 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_MKDTEMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRNCASECMP 1
| #define HAVE_DECL_MKDTEMP 1
| #define HAVE_DECL_STRDUP 1
| #define HAVE_DECL_STRNCASECMP 1
| #define HAVE_WORKING_CALLOC 1
| #define HAVE_WORKING_ISFINITE 1
| #define HAVE_WORKING_LOG1P 1
| #define HAVE_WORKING_FTELL 1
| #define HAVE_WORKING_SIGACTION 1
| #define HAVE_CABS 1
| #define HAVE_CARG 1
| #define HAVE_CEXP 1
| #define HAVE_CLOG 1
| #define HAVE_CSQRT 1
| #define HAVE_CPOW 1
| #define HAVE_CCOS 1
| #define HAVE_CSIN 1
| #define HAVE_CTAN 1
| #define HAVE_CACOS 1
| #define HAVE_CASIN 1
| #define HAVE_CATAN 1
| #define HAVE_CCOSH 1
| #define HAVE_CSINH 1
| #define HAVE_CTANH 1
| #define HAVE_VECLIB_FW 1
| #define HAVE_ICONV_H 1
| #define HAVE_ICONV 1
| #define HAVE_ICONVLIST 1
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_WCHAR_H 1
| #define HAVE_WCTYPE_H 1
| #define HAVE_MBRTOWC 1
| #define HAVE_WCRTOMB 1
| #define HAVE_WCSCOLL 1
| #define HAVE_WCSFTIME 1
| #define HAVE_WCSTOD 1
| #define HAVE_MBSTOWCS 1
| #define HAVE_WCSTOMBS 1
| #define HAVE_WCTRANS 1
| #define HAVE_ISWBLANK 1
| #define HAVE_WCTYPE 1
| #define HAVE_ISWCTYPE 1
| #define HAVE_WCTRANS_T 1
| #define HAVE_MBSTATE_T 1
| #define HAVE_LIBICUCORE 1
| #define USE_ICU_APPLE 1
| #define USE_ICU 1
| #define HAVE_X11 1
| #define HAVE_KEYSYM 1
| #define HAVE_X11_Xmu 1
| #define HAVE_WORKING_CAIRO 1
| #define HAVE_CAIRO_PDF 1
| #define HAVE_CAIRO_PS 1
| #define HAVE_CAIRO_SVG 1
| #define HAVE_COREFOUNDATION_FW 1
| #define HAVE_AQUA 1
| #define HAVE_TCLTK 1
| #define HAVE_BSD_NETWORKING 1
| #define HAVE_SOCKETS 1
| #define HAVE_INTERNET 1
| #define SUPPORT_LIBXML 1
| #define HAVE_JPEG 1
| #define HAVE_PNG 1
| #define HAVE_TIFFIO_H 1
| #define HAVE_TIFF 1
| #define HAVE_LZMA_H 1
| #define HAVE_LZMA 1
| #define HAVE_POSIX_LEAPSECONDS 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_STRUCT_STAT_ST_ATIMESPEC_TV_NSEC 1
| #define HAVE_SETITIMER 1
| #define R_PROFILING 1
| #define HAVE_FSEEKO 1
| #define NVALGRIND 1
| #define VALGRIND_LEVEL 0
| #define HAVE_KERN_USRSTACK 1
| #define R_PRINTCMD "lpr"
| #define HAVE_VISIBILITY 1
| #define HAVE_STDINT_H_WITH_UINTMAX 1
| #define HAVE_GETPAGESIZE 1
| #define HAVE_MMAP 1
| #define INTDIV0_RAISES_SIGFPE 1
| #define HAVE_INTTYPES_H_WITH_UINTMAX 1
| #define HAVE_UNSIGNED_LONG_LONG_INT 1
| #define HAVE_UNSIGNED_LONG_LONG 1
| #define HAVE_UINTMAX_T 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_BUILTIN_EXPECT 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_GETCWD 1
| #define HAVE_GETEGID 1
| #define HAVE_GETEUID 1
| #define HAVE_GETGID 1
| #define HAVE_GETUID 1
| #define HAVE_MUNMAP 1
| #define HAVE_STPCPY 1
| #define HAVE_STRCASECMP 1
| #define HAVE_STRDUP 1
| #define HAVE_STRTOUL 1
| #define HAVE_TSEARCH 1
| #define HAVE_DECL_FEOF_UNLOCKED 1
| #define HAVE_DECL_FGETS_UNLOCKED 0
| #define HAVE_ICONV 1
| #define ICONV_CONST
| #define HAVE_LONG_LONG_INT 1
| #define HAVE_LONG_DOUBLE 1
| #define HAVE_WCHAR_T 1
| #define HAVE_WINT_T 1
| #define HAVE_INTMAX_T 1
| #define HAVE_POSIX_PRINTF 1
| #define HAVE_STDINT_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_CFPREFERENCESCOPYAPPVALUE 1
| #define HAVE_CFLOCALECOPYCURRENT 1
| #define HAVE_STDDEF_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_ASPRINTF 1
| #define HAVE_FWPRINTF 1
| #define HAVE_PUTENV 1
| #define HAVE_SETENV 1
| #define HAVE_SETLOCALE 1
| #define HAVE_SNPRINTF 1
| #define HAVE_WCSLEN 1
| #define HAVE_DECL__SNPRINTF 0
| #define HAVE_DECL__SNWPRINTF 0
| #define HAVE_DECL_GETC_UNLOCKED 1
| #define HAVE_LANGINFO_CODESET 1
| #define HAVE_LC_MESSAGES 1
| #define HAVE_CFPREFERENCESCOPYAPPVALUE 1
| #define HAVE_CFLOCALECOPYCURRENT 1
| /* end confdefs.h. */
| #include <libintl.h>
|
| extern int _nl_msg_cat_cntr;
| extern
| #ifdef __cplusplus
| "C"
| #endif
| const char *_nl_expand_alias (const char *);
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
| bindtextdomain ("", "");
| return * gettext ("") + * ngettext ("", "", 0) + _nl_msg_cat_cntr + *_nl_expand_alias ("")
| ;
| return 0;
| }
configure:42613: result: no
configure:42667: checking whether to use NLS
configure:42669: result: yes
configure:42672: checking where the gettext function comes from
configure:42683: result: included intl directory
configure:42813: result: using as R_SHELL for scripts ... /bin/sh
configure:43105: creating ./config.status
## ---------------------- ##
## Running config.status. ##
## ---------------------- ##
This file was extended by R config.status 2.15.3, which was
generated by GNU Autoconf 2.69. Invocation command line was
CONFIG_FILES =
CONFIG_HEADERS =
CONFIG_LINKS =
CONFIG_COMMANDS =
$ ./config.status
on hnt-up-dhcp-109-007.wharton.upenn.edu
config.status:1859: creating Makeconf
config.status:1859: creating Makefile
config.status:1859: creating doc/Makefile
config.status:1859: creating doc/html/Makefile
config.status:1859: creating doc/manual/Makefile
config.status:1859: creating etc/Makefile
config.status:1859: creating etc/Makeconf
config.status:1859: creating etc/Renviron
config.status:1859: creating etc/ldpaths
config.status:1859: creating m4/Makefile
config.status:1859: creating po/Makefile.in
config.status:1859: creating share/Makefile
config.status:1859: creating src/Makefile
config.status:1859: creating src/appl/Makefile
config.status:1859: creating src/extra/Makefile
config.status:1859: creating src/extra/blas/Makefile
config.status:1859: creating src/extra/bzip2/Makefile
config.status:1859: creating src/extra/intl/Makefile
config.status:1859: creating src/extra/pcre/Makefile
config.status:1859: creating src/extra/tre/Makefile
config.status:1859: creating src/extra/xdr/Makefile
config.status:1859: creating src/extra/xz/Makefile
config.status:1859: creating src/extra/zlib/Makefile
config.status:1859: creating src/include/Makefile
config.status:1859: creating src/include/Rmath.h0
config.status:1859: creating src/include/R_ext/Makefile
config.status:1859: creating src/library/Recommended/Makefile
config.status:1859: creating src/library/Makefile
config.status:1859: creating src/library/base/DESCRIPTION
config.status:1859: creating src/library/base/Makefile
config.status:1859: creating src/library/compiler/DESCRIPTION
config.status:1859: creating src/library/compiler/Makefile
config.status:1859: creating src/library/datasets/DESCRIPTION
config.status:1859: creating src/library/datasets/Makefile
config.status:1859: creating src/library/graphics/DESCRIPTION
config.status:1859: creating src/library/graphics/Makefile
config.status:1859: creating src/library/grDevices/DESCRIPTION
config.status:1859: creating src/library/grDevices/Makefile
config.status:1859: creating src/library/grDevices/src/Makefile
config.status:1859: creating src/library/grDevices/src/cairo/Makefile
config.status:1859: creating src/library/grid/DESCRIPTION
config.status:1859: creating src/library/grid/Makefile
config.status:1859: creating src/library/grid/src/Makefile
config.status:1859: creating src/library/methods/DESCRIPTION
config.status:1859: creating src/library/methods/Makefile
config.status:1859: creating src/library/methods/src/Makefile
config.status:1859: creating src/library/parallel/DESCRIPTION
config.status:1859: creating src/library/parallel/Makefile
config.status:1859: creating src/library/parallel/src/Makefile
config.status:1859: creating src/library/profile/Makefile
config.status:1859: creating src/library/stats/DESCRIPTION
config.status:1859: creating src/library/stats/Makefile
config.status:1859: creating src/library/stats/src/Makefile
config.status:1859: creating src/library/stats4/DESCRIPTION
config.status:1859: creating src/library/stats4/Makefile
config.status:1859: creating src/library/splines/DESCRIPTION
config.status:1859: creating src/library/splines/Makefile
config.status:1859: creating src/library/splines/src/Makefile
config.status:1859: creating src/library/tcltk/DESCRIPTION
config.status:1859: creating src/library/tcltk/Makefile
config.status:1859: creating src/library/tcltk/src/Makefile
config.status:1859: creating src/library/tools/DESCRIPTION
config.status:1859: creating src/library/tools/Makefile
config.status:1859: creating src/library/tools/src/Makefile
config.status:1859: creating src/library/utils/DESCRIPTION
config.status:1859: creating src/library/utils/Makefile
config.status:1859: creating src/main/Makefile
config.status:1859: creating src/modules/Makefile
config.status:1859: creating src/modules/X11/Makefile
config.status:1859: creating src/modules/internet/Makefile
config.status:1859: creating src/modules/lapack/Makefile
config.status:1859: creating src/modules/vfonts/Makefile
config.status:1859: creating src/nmath/Makefile
config.status:1859: creating src/nmath/standalone/Makefile
config.status:1859: creating src/scripts/Makefile
config.status:1859: creating src/scripts/R.sh
config.status:1859: creating src/scripts/Rcmd
config.status:1859: creating src/scripts/f77_f2c
config.status:1859: creating src/scripts/mkinstalldirs
config.status:1859: creating src/scripts/pager
config.status:1859: creating src/unix/Makefile
config.status:1859: creating tests/Makefile
config.status:1859: creating tests/Embedding/Makefile
config.status:1859: creating tests/Examples/Makefile
config.status:1859: creating tests/Native/Makefile
config.status:1859: creating tools/Makefile
config.status:1859: creating src/include/config.h
config.status:2059: executing libtool commands
config.status:2059: executing po-directories commands
config.status:2059: executing stamp-h commands
configure:46413: result:
R is now configured for x86_64-apple-darwin12.3.0
Source directory: .
Installation directory: /usr/local/Cellar/r/2.15.3
C compiler: cc -g -O2
Fortran 77 compiler: /usr/bin/gfortran
C++ compiler: c++ -g -O2
Fortran 90/95 compiler: /usr/bin/gfortran
Obj-C compiler: cc -g -O2 -fobjc-exceptions
Interfaces supported: X11, aqua, tcltk
External libraries: readline, ICU, lzma
Additional capabilities: PNG, JPEG, TIFF, NLS, cairo
Options enabled: framework, shared BLAS, R profiling, Java
Recommended packages: yes
configure:46471: WARNING: you cannot build PDF versions of the R manuals
configure:46475: WARNING: you cannot build PDF versions of vignettes and help pages
## ---------------- ##
## Cache variables. ##
## ---------------- ##
ac_cv_build=x86_64-apple-darwin12.3.0
ac_cv_c_bigendian=no
ac_cv_c_compiler_gnu=yes
ac_cv_c_const=yes
ac_cv_c_inline=inline
ac_cv_c_uint64_t=yes
ac_cv_cxx_compiler_gnu=yes
ac_cv_env_BLAS_LIBS_set=
ac_cv_env_BLAS_LIBS_value=
ac_cv_env_CCC_set=
ac_cv_env_CCC_value=
ac_cv_env_CC_set=set
ac_cv_env_CC_value=cc
ac_cv_env_CFLAGS_set=
ac_cv_env_CFLAGS_value=
ac_cv_env_CPICFLAGS_set=
ac_cv_env_CPICFLAGS_value=
ac_cv_env_CPPFLAGS_set=
ac_cv_env_CPPFLAGS_value=
ac_cv_env_CPP_set=
ac_cv_env_CPP_value=
ac_cv_env_CXXCPP_set=
ac_cv_env_CXXCPP_value=
ac_cv_env_CXXFLAGS_set=
ac_cv_env_CXXFLAGS_value=
ac_cv_env_CXXPICFLAGS_set=
ac_cv_env_CXXPICFLAGS_value=
ac_cv_env_CXX_set=set
ac_cv_env_CXX_value=c++
ac_cv_env_DEFS_set=
ac_cv_env_DEFS_value=
ac_cv_env_DYLIB_LDFLAGS_set=
ac_cv_env_DYLIB_LDFLAGS_value=
ac_cv_env_DYLIB_LD_set=
ac_cv_env_DYLIB_LD_value=
ac_cv_env_F77_set=set
ac_cv_env_F77_value=/usr/bin/gfortran
ac_cv_env_FCFLAGS_set=set
ac_cv_env_FCFLAGS_value=
ac_cv_env_FCPICFLAGS_set=
ac_cv_env_FCPICFLAGS_value=
ac_cv_env_FC_set=set
ac_cv_env_FC_value=/usr/bin/gfortran
ac_cv_env_FFLAGS_set=set
ac_cv_env_FFLAGS_value=
ac_cv_env_FPICFLAGS_set=
ac_cv_env_FPICFLAGS_value=
ac_cv_env_JAVA_HOME_set=
ac_cv_env_JAVA_HOME_value=
ac_cv_env_LAPACK_LIBS_set=
ac_cv_env_LAPACK_LIBS_value=
ac_cv_env_LDFLAGS_set=
ac_cv_env_LDFLAGS_value=
ac_cv_env_LIBS_set=
ac_cv_env_LIBS_value=
ac_cv_env_LIBnn_set=
ac_cv_env_LIBnn_value=
ac_cv_env_MAIN_CFLAGS_set=
ac_cv_env_MAIN_CFLAGS_value=
ac_cv_env_MAIN_FFLAGS_set=
ac_cv_env_MAIN_FFLAGS_value=
ac_cv_env_MAIN_LDFLAGS_set=
ac_cv_env_MAIN_LDFLAGS_value=
ac_cv_env_MAIN_LD_set=
ac_cv_env_MAIN_LD_value=
ac_cv_env_MAKE_set=
ac_cv_env_MAKE_value=
ac_cv_env_OBJCFLAGS_set=
ac_cv_env_OBJCFLAGS_value=
ac_cv_env_OBJC_set=set
ac_cv_env_OBJC_value=cc
ac_cv_env_R_BATCHSAVE_set=
ac_cv_env_R_BATCHSAVE_value=
ac_cv_env_R_BROWSER_set=
ac_cv_env_R_BROWSER_value=
ac_cv_env_R_PAPERSIZE_set=
ac_cv_env_R_PAPERSIZE_value=
ac_cv_env_R_PDFVIEWER_set=
ac_cv_env_R_PDFVIEWER_value=
ac_cv_env_R_PRINTCMD_set=
ac_cv_env_R_PRINTCMD_value=
ac_cv_env_R_SHELL_set=
ac_cv_env_R_SHELL_value=
ac_cv_env_SAFE_FFLAGS_set=
ac_cv_env_SAFE_FFLAGS_value=
ac_cv_env_SHLIB_CFLAGS_set=
ac_cv_env_SHLIB_CFLAGS_value=
ac_cv_env_SHLIB_CXXLDFLAGS_set=
ac_cv_env_SHLIB_CXXLDFLAGS_value=
ac_cv_env_SHLIB_CXXLD_set=
ac_cv_env_SHLIB_CXXLD_value=
ac_cv_env_SHLIB_FCLDFLAGS_set=
ac_cv_env_SHLIB_FCLDFLAGS_value=
ac_cv_env_SHLIB_FCLD_set=
ac_cv_env_SHLIB_FCLD_value=
ac_cv_env_SHLIB_FFLAGS_set=
ac_cv_env_SHLIB_FFLAGS_value=
ac_cv_env_SHLIB_LDFLAGS_set=
ac_cv_env_SHLIB_LDFLAGS_value=
ac_cv_env_SHLIB_LD_set=
ac_cv_env_SHLIB_LD_value=
ac_cv_env_TAR_set=
ac_cv_env_TAR_value=
ac_cv_env_TCLTK_CPPFLAGS_set=
ac_cv_env_TCLTK_CPPFLAGS_value=
ac_cv_env_TCLTK_LIBS_set=
ac_cv_env_TCLTK_LIBS_value=
ac_cv_env_XMKMF_set=
ac_cv_env_XMKMF_value=
ac_cv_env_YACC_set=
ac_cv_env_YACC_value=
ac_cv_env_YFLAGS_set=
ac_cv_env_YFLAGS_value=
ac_cv_env_build_alias_set=
ac_cv_env_build_alias_value=
ac_cv_env_host_alias_set=
ac_cv_env_host_alias_value=
ac_cv_env_r_arch_set=
ac_cv_env_r_arch_value=
ac_cv_env_target_alias_set=
ac_cv_env_target_alias_value=
ac_cv_f77_compiler_gnu=yes
ac_cv_f77_dummy_main=none
ac_cv_f77_libs=' -L/usr/local/lib -L/usr/lib/gcc/i686-apple-darwin11/4.2.1/x86_64 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1/../../.. -lgfortranbegin -lgfortran'
ac_cv_f77_mangling='lower case, underscore, no extra underscore'
ac_cv_fc_compiler_gnu=yes
ac_cv_fc_srcext_f90=none
ac_cv_fc_srcext_f95=none
ac_cv_fortran_dummy_main=none
ac_cv_func___fsetlocking=no
ac_cv_func___setfpucw=no
ac_cv_func_alloca_works=yes
ac_cv_func_argz_count=no
ac_cv_func_argz_next=no
ac_cv_func_argz_stringify=no
ac_cv_func_asprintf=yes
ac_cv_func_connect=yes
ac_cv_func_fseeko=yes
ac_cv_func_ftello=yes
ac_cv_func_fwprintf=yes
ac_cv_func_getcwd=yes
ac_cv_func_getegid=yes
ac_cv_func_geteuid=yes
ac_cv_func_getgid=yes
ac_cv_func_gethostbyname=yes
ac_cv_func_getpagesize=yes
ac_cv_func_getuid=yes
ac_cv_func_history_truncate_file=yes
ac_cv_func_iconv='in libiconv'
ac_cv_func_iconvlist=yes
ac_cv_func_isblank=yes
ac_cv_func_isnan=yes
ac_cv_func_matherr=yes
ac_cv_func_mempcpy=no
ac_cv_func_mkdtemp=yes
ac_cv_func_mmap_fixed_mapped=yes
ac_cv_func_munmap=yes
ac_cv_func_putenv=yes
ac_cv_func_realpath=yes
ac_cv_func_remove=yes
ac_cv_func_setenv=yes
ac_cv_func_setitimer=yes
ac_cv_func_setlocale=yes
ac_cv_func_shmat=yes
ac_cv_func_snprintf=yes
ac_cv_func_stpcpy=yes
ac_cv_func_strcasecmp=yes
ac_cv_func_strdup=yes
ac_cv_func_strncasecmp=yes
ac_cv_func_strtoul=yes
ac_cv_func_tsearch=yes
ac_cv_func_vasprintf=yes
ac_cv_func_wcslen=yes
ac_cv_gnu_library_2=no
ac_cv_gnu_library_2_1=no
ac_cv_have_decl__snprintf=no
ac_cv_have_decl__snwprintf=no
ac_cv_have_decl_access=yes
ac_cv_have_decl_alloca=yes
ac_cv_have_decl_cabs=yes
ac_cv_have_decl_cacos=yes
ac_cv_have_decl_carg=yes
ac_cv_have_decl_casin=yes
ac_cv_have_decl_catan=yes
ac_cv_have_decl_ccos=yes
ac_cv_have_decl_ccosh=yes
ac_cv_have_decl_cexp=yes
ac_cv_have_decl_chdir=yes
ac_cv_have_decl_chmod=yes
ac_cv_have_decl_clock_gettime=no
ac_cv_have_decl_clog=yes
ac_cv_have_decl_cpow=yes
ac_cv_have_decl_csin=yes
ac_cv_have_decl_csinh=yes
ac_cv_have_decl_csqrt=yes
ac_cv_have_decl_ctan=yes
ac_cv_have_decl_ctanh=yes
ac_cv_have_decl_execv=yes
ac_cv_have_decl_expm1=yes
ac_cv_have_decl_fcntl=yes
ac_cv_have_decl_fdopen=yes
ac_cv_have_decl_feof_unlocked=yes
ac_cv_have_decl_fgets_unlocked=no
ac_cv_have_decl_ftruncate=yes
ac_cv_have_decl_getc_unlocked=yes
ac_cv_have_decl_getcwd=yes
ac_cv_have_decl_geteuid=yes
ac_cv_have_decl_getgrgid=yes
ac_cv_have_decl_getpriority=yes
ac_cv_have_decl_getpwuid=yes
ac_cv_have_decl_getrlimit=yes
ac_cv_have_decl_getrusage=yes
ac_cv_have_decl_gettimeofday=yes
ac_cv_have_decl_getuid=yes
ac_cv_have_decl_glob=yes
ac_cv_have_decl_hypot=yes
ac_cv_have_decl_isfinite=yes
ac_cv_have_decl_isnan=yes
ac_cv_have_decl_iswblank=yes
ac_cv_have_decl_iswctype=yes
ac_cv_have_decl_kill=yes
ac_cv_have_decl_link=yes
ac_cv_have_decl_log10=yes
ac_cv_have_decl_log1p=yes
ac_cv_have_decl_log2=yes
ac_cv_have_decl_mbrtowc=yes
ac_cv_have_decl_mbstowcs=yes
ac_cv_have_decl_mkdtemp=yes
ac_cv_have_decl_mkfifo=yes
ac_cv_have_decl_nearbyint=yes
ac_cv_have_decl_nearbyintl=yes
ac_cv_have_decl_popen=yes
ac_cv_have_decl_powl=yes
ac_cv_have_decl_putenv=yes
ac_cv_have_decl_readlink=yes
ac_cv_have_decl_realpath=yes
ac_cv_have_decl_rint=yes
ac_cv_have_decl_rintl=yes
ac_cv_have_decl_rl_completion_matches=yes
ac_cv_have_decl_setenv=yes
ac_cv_have_decl_sigaction=yes
ac_cv_have_decl_sigaltstack=yes
ac_cv_have_decl_sigemptyset=yes
ac_cv_have_decl_siglongjmp=yes
ac_cv_have_decl_sigsetjmp=yes
ac_cv_have_decl_stat=yes
ac_cv_have_decl_strdup=yes
ac_cv_have_decl_strncasecmp=yes
ac_cv_have_decl_symlink=yes
ac_cv_have_decl_sysconf=yes
ac_cv_have_decl_times=yes
ac_cv_have_decl_timespec_get=no
ac_cv_have_decl_umask=yes
ac_cv_have_decl_unsetenv=yes
ac_cv_have_decl_utime=yes
ac_cv_have_decl_utimes=yes
ac_cv_have_decl_va_copy=yes
ac_cv_have_decl_vasprintf=yes
ac_cv_have_decl_wcrtomb=yes
ac_cv_have_decl_wcscoll=yes
ac_cv_have_decl_wcsftime=yes
ac_cv_have_decl_wcstod=yes
ac_cv_have_decl_wcstombs=yes
ac_cv_have_decl_wctrans=yes
ac_cv_have_decl_wctype=yes
ac_cv_have_x='have_x=yes ac_x_includes='\'''\'' ac_x_libraries='\'''\'''
ac_cv_header_X11_Intrinsic_h=yes
ac_cv_header_X11_Xmu_Atoms_h=yes
ac_cv_header_argz_h=no
ac_cv_header_arpa_inet_h=yes
ac_cv_header_complex_h=yes
ac_cv_header_dirent_dirent_h=yes
ac_cv_header_dl_h=no
ac_cv_header_dlfcn_h=yes
ac_cv_header_elf_h=no
ac_cv_header_errno_h=yes
ac_cv_header_fcntl_h=yes
ac_cv_header_floatingpoint_h=no
ac_cv_header_fpu_control_h=no
ac_cv_header_glob_h=yes
ac_cv_header_grp_h=yes
ac_cv_header_iconv_h=yes
ac_cv_header_inttypes_h=yes
ac_cv_header_limits_h=yes
ac_cv_header_locale_h=yes
ac_cv_header_lzma_h=yes
ac_cv_header_memory_h=yes
ac_cv_header_minix_config_h=no
ac_cv_header_netdb_h=yes
ac_cv_header_netinet_in_h=yes
ac_cv_header_pwd_h=yes
ac_cv_header_readline_history_h=yes
ac_cv_header_readline_readline_h=yes
ac_cv_header_rpc_types_h=yes
ac_cv_header_rpc_xdr_h=yes
ac_cv_header_stdarg_h=yes
ac_cv_header_stdbool_h=yes
ac_cv_header_stdc=yes
ac_cv_header_stddef_h=yes
ac_cv_header_stdint_h=yes
ac_cv_header_stdlib_h=yes
ac_cv_header_string_h=yes
ac_cv_header_strings_h=yes
ac_cv_header_sys_param_h=yes
ac_cv_header_sys_resource_h=yes
ac_cv_header_sys_select_h=yes
ac_cv_header_sys_socket_h=yes
ac_cv_header_sys_stat_h=yes
ac_cv_header_sys_time_h=yes
ac_cv_header_sys_times_h=yes
ac_cv_header_sys_types_h=yes
ac_cv_header_sys_utsname_h=yes
ac_cv_header_sys_wait_h=yes
ac_cv_header_tcl_h=yes
ac_cv_header_tiffio_h=yes
ac_cv_header_tk_h=yes
ac_cv_header_unistd_h=yes
ac_cv_header_utime_h=yes
ac_cv_header_wchar_h=yes
ac_cv_header_wctype_h=yes
ac_cv_host=x86_64-apple-darwin12.3.0
ac_cv_lib_ICE_IceConnectionNumber=yes
ac_cv_lib_Xmu_XmuInternAtom=yes
ac_cv_lib_Xt_XtToolkitInitialize=yes
ac_cv_lib_icucore_ucol_open=yes
ac_cv_lib_jpeg_jpeg_destroy_compress=yes
ac_cv_lib_lzma_lzma_version_number=yes
ac_cv_lib_m_sin=yes
ac_cv_lib_png_png_create_write_struct=yes
ac_cv_lib_readline_rl_callback_read_char=yes
ac_cv_lib_tiff_TIFFOpen=yes
ac_cv_lib_z_main=yes
ac_cv_member_struct_stat_st_atim_tv_nsec=no
ac_cv_member_struct_stat_st_atimespec_tv_nsec=yes
ac_cv_objc_compiler_gnu=yes
ac_cv_objext=o
ac_cv_path_EGREP='/usr/bin/grep -E'
ac_cv_path_FGREP='/usr/bin/grep -F'
ac_cv_path_GETWD=/bin/pwd
ac_cv_path_GMSGFMT=:
ac_cv_path_GREP=/usr/bin/grep
ac_cv_path_INSTALL_INFO=/usr/bin/install-info
ac_cv_path_JAR=/usr/bin/jar
ac_cv_path_JAVA=/usr/bin/java
ac_cv_path_JAVAC=/usr/bin/javac
ac_cv_path_JAVAH=/usr/bin/javah
ac_cv_path_MAKEINFO=/usr/bin/makeinfo
ac_cv_path_MSGFMT=:
ac_cv_path_MSGMERGE=:
ac_cv_path_NOTANGLE=false
ac_cv_path_PAGER=/usr/bin/less
ac_cv_path_PAPERCONF=false
ac_cv_path_PKGCONF=/usr/local/bin/pkg-config
ac_cv_path_R_BROWSER=/usr/bin/open
ac_cv_path_R_BZIPCMD=/usr/bin/bzip2
ac_cv_path_R_GZIPCMD=/usr/bin/gzip
ac_cv_path_R_PDFVIEWER=/usr/bin/open
ac_cv_path_R_UNZIPCMD=/usr/bin/unzip
ac_cv_path_R_ZIPCMD=/usr/bin/zip
ac_cv_path_SED=/usr/local/Library/ENV/4.3/sed
ac_cv_path_TAR=/usr/bin/gnutar
ac_cv_path_TEXI2DVI=/usr/bin/texi2dvi
ac_cv_path_WHICH=/usr/bin/which
ac_cv_path_XGETTEXT=:
ac_cv_path_install='/usr/bin/install -c'
ac_cv_path_mkdir=/usr/local/bin/gmkdir
ac_cv_prog_AR=ar
ac_cv_prog_AWK=gawk
ac_cv_prog_CPP='cc -E'
ac_cv_prog_CXXCPP='c++ -E'
ac_cv_prog_INTLBISON=bison
ac_cv_prog_R_PRINTCMD=lpr
ac_cv_prog_YACC='bison -y'
ac_cv_prog_ac_ct_CC=cc
ac_cv_prog_ac_ct_DSYMUTIL=dsymutil
ac_cv_prog_ac_ct_LIPO=lipo
ac_cv_prog_ac_ct_NMEDIT=nmedit
ac_cv_prog_ac_ct_OTOOL=otool
ac_cv_prog_ac_ct_RANLIB=ranlib
ac_cv_prog_ac_ct_STRIP=strip
ac_cv_prog_c_openmp=unsupported
ac_cv_prog_cc_c89=
ac_cv_prog_cc_c99=
ac_cv_prog_cc_g=yes
ac_cv_prog_cc_stdc=
ac_cv_prog_cxx_g=yes
ac_cv_prog_cxx_openmp=unsupported
ac_cv_prog_f77_g=yes
ac_cv_prog_f77_openmp=-fopenmp
ac_cv_prog_f77_v=-v
ac_cv_prog_fc_g=yes
ac_cv_prog_fc_openmp=-fopenmp
ac_cv_prog_gcc_traditional=no
ac_cv_prog_make_make_set=yes
ac_cv_prog_objc_g=yes
ac_cv_safe_to_define___extensions__=yes
ac_cv_search_connect='none required'
ac_cv_search_dlopen='none required'
ac_cv_search_gethostbyname='none required'
ac_cv_search_opendir='none required'
ac_cv_search_xdr_string='none required'
ac_cv_sizeof_double=8
ac_cv_sizeof_int=4
ac_cv_sizeof_long=8
ac_cv_sizeof_long_double=16
ac_cv_sizeof_long_long=8
ac_cv_sizeof_size_t=8
ac_cv_sys_file_offset_bits=no
ac_cv_sys_largefile_CC=no
ac_cv_sys_largefile_source=no
ac_cv_type_KeySym=yes
ac_cv_type_blkcnt_t=yes
ac_cv_type_double_complex=yes
ac_cv_type_intptr_t=yes
ac_cv_type_long_long_int=yes
ac_cv_type_mbstate_t=yes
ac_cv_type_off_t=yes
ac_cv_type_pid_t=yes
ac_cv_type_ptrdiff_t=yes
ac_cv_type_signal=void
ac_cv_type_size_t=yes
ac_cv_type_stack_t=yes
ac_cv_type_uintptr_t=yes
ac_cv_type_unsigned_long_long=yes
ac_cv_type_unsigned_long_long_int=yes
ac_cv_type_wctrans_t=yes
ac_cv_working_alloca_h=yes
acl_cv_hardcode_direct=no
acl_cv_hardcode_libdir_flag_spec=
acl_cv_hardcode_libdir_separator=
acl_cv_hardcode_minus_L=no
acl_cv_libext=a
acl_cv_libname_spec='lib$name'
acl_cv_library_names_spec='$libname$shrext'
acl_cv_rpath=done
acl_cv_shlibext=dylib
acl_cv_wl=-Wl,
am_cv_func_iconv=yes
am_cv_langinfo_codeset=yes
am_cv_lib_iconv=no
am_cv_proto_iconv='extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft);'
am_cv_proto_iconv_arg1=
gl_cv_cc_visibility=yes
gl_cv_header_inttypes_h=yes
gl_cv_header_stdint_h=yes
gl_cv_size_max=yes
gt_cv_c_intmax_t=yes
gt_cv_c_long_double=yes
gt_cv_c_wchar_t=yes
gt_cv_c_wint_t=yes
gt_cv_func_CFLocaleCopyCurrent=yes
gt_cv_func_CFPreferencesCopyAppValue=yes
gt_cv_func_gnugettext2_libc=no
gt_cv_func_gnugettext2_libintl=no
gt_cv_func_printf_posix=yes
gt_cv_int_divbyzero_sigfpe=yes
gt_cv_inttypes_pri_broken=no
gt_cv_nl_locale_name=no
gt_cv_val_LC_MESSAGES=yes
lt_cv_apple_cc_single_mod=yes
lt_cv_deplibs_check_method=pass_all
lt_cv_file_magic_cmd='$MAGIC_CMD'
lt_cv_file_magic_test_file=
lt_cv_ld_exported_symbols_list=yes
lt_cv_ld_reload_flag=-r
lt_cv_nm_interface='BSD nm'
lt_cv_objdir=.libs
lt_cv_path_LD=/usr/bin/ld
lt_cv_path_LDCXX=/usr/bin/ld
lt_cv_path_NM=/usr/bin/nm
lt_cv_prog_compiler_c_o=yes
lt_cv_prog_compiler_c_o_CXX=yes
lt_cv_prog_compiler_c_o_F77=yes
lt_cv_prog_compiler_c_o_FC=yes
lt_cv_prog_compiler_pic_works=yes
lt_cv_prog_compiler_pic_works_CXX=yes
lt_cv_prog_compiler_pic_works_F77=yes
lt_cv_prog_compiler_pic_works_FC=yes
lt_cv_prog_compiler_rtti_exceptions=yes
lt_cv_prog_compiler_static_works=no
lt_cv_prog_compiler_static_works_CXX=no
lt_cv_prog_compiler_static_works_F77=no
lt_cv_prog_compiler_static_works_FC=no
lt_cv_prog_gnu_ld=no
lt_cv_prog_gnu_ldcxx=no
lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[ ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*_\([_A-Za-z][_A-Za-z0-9]*\)$/\1 _\2 \2/p'\'''
lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \([^ ]*\) $/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[BCDEGRST]* \([^ ]*\) \([^ ]*\)$/ {"\2", (void *) \&\2},/p'\'''
lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='sed -n -e '\''s/^: \([^ ]*\) $/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[BCDEGRST]* \([^ ]*\) \(lib[^ ]*\)$/ {"\2", (void *) \&\2},/p'\'' -e '\''s/^[BCDEGRST]* \([^ ]*\) \([^ ]*\)$/ {"lib\2", (void *) \&\2},/p'\'''
lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^T .* \(.*\)$/extern int \1();/p'\'' -e '\''s/^[BCDEGRST]* .* \(.*\)$/extern char \1;/p'\'''
lt_cv_sys_max_cmd_len=196608
nls_cv_force_use_gnu_gettext=no
nls_cv_header_intl=
nls_cv_header_libgt=
nls_cv_use_gnu_gettext=yes
r_cv_FOUNDATION_CPPFLAGS=
r_cv_FOUNDATION_LIBS='-framework Foundation'
r_cv_JAVA_CPPFLAGS=-I/System/Library/Frameworks/JavaVM.framework/Headers
r_cv_JAVA_LD_LIBRARY_PATH=
r_cv_JAVA_LIBS='-framework JavaVM'
r_cv_OBJCXX=c++
r_cv_bsd_networking=yes
r_cv_c_inline=inline
r_cv_c_libs=' -L/usr/local/lib -L/usr/local/opt/readline/lib -L/opt/X11/lib -lSystem /usr/bin/../lib/clang/4.2/lib/darwin/libclang_rt.osx.a'
r_cv_c_no_math_inlines=no
r_cv_cache_foundation_flags=yes
r_cv_cache_java_flags=yes
r_cv_cairo_works=yes
r_cv_check_fw_CoreFoundation='-framework CoreFoundation'
r_cv_check_fw_save_LIBS='-licucore -lm -liconv'
r_cv_check_fw_vecLib='-framework vecLib'
r_cv_func_calloc_works=yes
r_cv_func_isfinite_works=yes
r_cv_func_log1p_works=yes
r_cv_func_sigaction_works=yes
r_cv_has_cairo=yes
r_cv_has_dynlookup=yes
r_cv_has_pangocairo=no
r_cv_have_lzma=yes
r_cv_header_glibc2=no
r_cv_header_jpeglib_h=yes
r_cv_header_png_h=yes
r_cv_header_setjmp_posix=yes
r_cv_iconv_latin1=yes
r_cv_icu=no
r_cv_ieee_754=yes
r_cv_java_home=/System/Library/Java/JavaVirtualMachines/1.6.0.jdk/Contents/Home
r_cv_java_works=yes
r_cv_javac_works=yes
r_cv_jni=yes
r_cv_kern_usrstack=yes
r_cv_misc_recommended_packages=yes
r_cv_mktime_errno=no
r_cv_objc_foundation=yes
r_cv_objc_runtime=-lobjc
r_cv_objc_runtime_style=next
r_cv_path_TCL_CONFIG=/usr/lib/tclConfig.sh
r_cv_path_TK_CONFIG=/usr/lib/tkConfig.sh
r_cv_prog_c_v=-v
r_cv_prog_cc_c_o_lo=yes
r_cv_prog_cc_m='cc -MM'
r_cv_prog_cc_vis=yes
r_cv_prog_cxx_m=yes
r_cv_prog_f77_append_second_underscore=no
r_cv_prog_f77_append_underscore=yes
r_cv_prog_f77_can_run=yes
r_cv_prog_f77_cc_compat=yes
r_cv_prog_f77_cc_compat_complex=yes
r_cv_prog_f77_vis=yes
r_cv_prog_makeinfo_v4=yes
r_cv_prog_objc_flag__fobjc_exceptions=yes
r_cv_prog_objc_m='cc -MM'
r_cv_putenv_unset2=no
r_cv_putenv_unset=no
r_cv_size_max=yes
r_cv_sys_posix_leapseconds=yes
r_cv_tcltk_works=yes
r_cv_type_keysym=yes
r_cv_type_socklen=socklen_t
r_cv_visibility_attribute=no
r_cv_working_ftell=yes
r_cv_zlib_mmap=yes
## ----------------- ##
## Output variables. ##
## ----------------- ##
ACLOCAL='aclocal'
ALLOCA=''
AR='ar'
ARFLAGS='rc'
AUTOCONF='autoconf'
AUTOHEADER='autoheader'
AUTOMAKE='automake'
AWK='gawk'
BITMAP_LIBS='-ltiff -ljpeg -lpng -lz'
BLAS_LIBS0=''
BLAS_LIBS='-L$(R_HOME)/lib$(R_ARCH) -lRblas'
BLAS_SHLIB_FALSE='#'
BLAS_SHLIB_TRUE=''
BUILDDIR_IS_SRCDIR='yes'
BUILD_AQUA_FALSE='#'
BUILD_AQUA_TRUE=''
BUILD_BZLIB_FALSE='#'
BUILD_BZLIB_TRUE=''
BUILD_CC=''
BUILD_CYGWIN_FALSE=''
BUILD_CYGWIN_TRUE='#'
BUILD_DEVCAIRO_FALSE='#'
BUILD_DEVCAIRO_TRUE=''
BUILD_HTML_FALSE=''
BUILD_HTML_TRUE='#'
BUILD_INCLUDED_LIBINTL='yes'
BUILD_LIBINTL_FALSE='#'
BUILD_LIBINTL_TRUE=''
BUILD_LTO_FALSE=''
BUILD_LTO_TRUE='#'
BUILD_PCRE_FALSE='#'
BUILD_PCRE_TRUE=''
BUILD_R=''
BUILD_X11_FALSE='#'
BUILD_X11_TRUE=''
BUILD_XDR_FALSE=''
BUILD_XDR_TRUE='#'
BUILD_XZ_FALSE=''
BUILD_XZ_TRUE='#'
BUILD_ZLIB_FALSE='#'
BUILD_ZLIB_TRUE=''
BYTE_COMPILE_PACKAGES_FALSE='#'
BYTE_COMPILE_PACKAGES_TRUE=''
CAIROX11_CPPFLAGS='-I/opt/X11/include/cairo -I/opt/X11/include/pixman-1 -I/opt/X11/include -I/opt/X11/include/freetype2 -I/opt/X11/include -I/opt/X11/include/libpng15 -I/opt/X11/include '
CAIROX11_LIBS='-L/opt/X11/lib -lz -lcairo -lz -lpixman-1 -lfontconfig -lexpat -lfreetype -lz -lbz2 -lpng15 -lz -lxcb-shm -lX11-xcb -lxcb-render -lXrender -lX11 -lxcb -lXau -lXdmcp '
CAIRO_CPPFLAGS='-I/opt/X11/include/cairo -I/opt/X11/include/pixman-1 -I/opt/X11/include -I/opt/X11/include/freetype2 -I/opt/X11/include -I/opt/X11/include/libpng15 -I/opt/X11/include '
CAIRO_LIBS='-L/opt/X11/lib -lz -lcairo -lz -lpixman-1 -lfontconfig -lexpat -lfreetype -lz -lbz2 -lpng15 -lz -lxcb-shm -lX11-xcb -lxcb-render -lXrender -lX11 -lxcb -lXau -lXdmcp '
CATOBJEXT='.gmo'
CC='cc'
CFLAGS='-g -O2'
CFLAG_VISIBILITY='-fvisibility=hidden'
COMPILE_FORTRAN_DOUBLE_COMPLEX_FALSE=''
COMPILE_FORTRAN_DOUBLE_COMPLEX_TRUE='#'
CPICFLAGS='-fPIC'
CPP='cc -E'
CPPFLAGS='-I/usr/local/include'
CROSS_COMPILING_FALSE=''
CROSS_COMPILING_TRUE='#'
CXX='c++'
CXXCPP='c++ -E'
CXXFLAGS='-g -O2'
CXXPICFLAGS='-fPIC'
C_VISIBILITY=''
DATADIRNAME='share'
DEFS='-DHAVE_CONFIG_H'
DSYMUTIL='dsymutil'
DUMPBIN=''
DYLIB_EXT='.dylib'
DYLIB_LD='cc'
DYLIB_LDFLAGS='-dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress'
DYLIB_UNDEFINED_ALLOWED_FALSE=''
DYLIB_UNDEFINED_ALLOWED_TRUE='#'
ECHO_C='\c'
ECHO_N=''
ECHO_T=''
EGREP='/usr/bin/grep -E'
EXEEXT=''
F77='/usr/bin/gfortran'
F77_VISIBILITY=''
FC='/usr/bin/gfortran'
FCFLAGS=''
FCFLAGS_f90=''
FCFLAGS_f95=''
FCLIBS=''
FCPICFLAGS='-fno-common'
FFLAGS=''
FGREP='/usr/bin/grep -F'
FLIBS=' -L/usr/lib/gcc/i686-apple-darwin11/4.2.1/x86_64 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1 -L/usr/lib -lgfortran'
FLIBS_IN_SO=' -L/usr/lib/gcc/i686-apple-darwin11/4.2.1/x86_64 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1 -L/usr/lib -lgfortran'
FOUNDATION_CPPFLAGS=''
FOUNDATION_LIBS='-framework Foundation'
FPICFLAGS='-fPIC'
FW_VERSION='2.15'
GENCAT='gencat'
GETWD='/bin/pwd'
GLIBC21='no'
GLIBC2='no'
GMSGFMT=':'
GMSGFMT_015=':'
GREP='/usr/bin/grep'
HAVE_ASPRINTF='1'
HAVE_FORTRAN_DOUBLE_COMPLEX=''
HAVE_POSIX_PRINTF='1'
HAVE_SNPRINTF='1'
HAVE_VISIBILITY='1'
HAVE_WPRINTF='0'
INSTALL_DATA='${INSTALL} -m 644'
INSTALL_INFO='/usr/bin/install-info'
INSTALL_PROGRAM='${INSTALL}'
INSTALL_SCRIPT='${INSTALL}'
INSTOBJEXT='.mo'
INTLBISON='bison'
INTLLIBS=' -Wl,-framework -Wl,CoreFoundation'
INTLOBJS='$(GETTOBJS)'
INTL_LIBTOOL_SUFFIX_PREFIX=''
INTL_MACOSX_LIBS='-Wl,-framework -Wl,CoreFoundation'
JAR='/usr/bin/jar'
JAVA='/usr/bin/java'
JAVAC='/usr/bin/javac'
JAVAH='/usr/bin/javah'
JAVA_CPPFLAGS0='-I/System/Library/Frameworks/JavaVM.framework/Headers'
JAVA_HOME='/System/Library/Java/JavaVirtualMachines/1.6.0.jdk/Contents/Home'
JAVA_LD_LIBRARY_PATH=''
JAVA_LIBS0='-framework JavaVM'
KPSEWHICH=''
LAPACK_LDFLAGS=''
LAPACK_LIBS='-L$(R_HOME)/lib$(R_ARCH) -lRlapack'
LD='/usr/bin/ld'
LDFLAGS='-L/usr/local/lib'
LIBICONV=''
LIBINTL=' -Wl,-framework -Wl,CoreFoundation'
LIBM=''
LIBMULTITHREAD=''
LIBOBJS=''
LIBPTH=''
LIBR='-L$(R_HOME)/lib$(R_ARCH) -lR -dylib_file libRblas.dylib:$(R_HOME)/lib$(R_ARCH)/libRblas.dylib'
LIBR_LDFLAGS='-install_name libR.dylib -compatibility_version 2.15.0 -current_version 2.15.3 -headerpad_max_install_names'
LIBS=' -llzma -licucore -lm -liconv'
LIBTHREAD=''
LIBTOOL='$(SHELL) $(top_builddir)/libtool'
LIBTOOL_DEPS='tools/ltmain.sh'
LIBnn='lib'
LIPO='lipo'
LN_S='ln -s'
LTLIBICONV=''
LTLIBINTL='../extra/intl/libintl.a -Wl,-framework -Wl,CoreFoundation'
LTLIBMULTITHREAD=''
LTLIBOBJS=''
LTLIBPTH=''
LTLIBTHREAD=''
LTO=''
LTOALL=''
MAINTAINER_MODE_FALSE=''
MAINTAINER_MODE_TRUE='#'
MAIN_CFLAGS=''
MAIN_FFLAGS=''
MAIN_LD='cc'
MAIN_LDFLAGS=''
MAJ_MIN_VERSION='2.15'
MAKE='make'
MAKEINDEX=''
MAKEINFO='/usr/bin/makeinfo'
MKDIR_P='/usr/local/bin/gmkdir -p'
MSGFMT=':'
MSGFMT_015=':'
MSGMERGE=':'
NM='/usr/bin/nm'
NMEDIT='nmedit'
NOTANGLE='false'
OBJC='cc'
OBJCFLAGS='-g -O2 -fobjc-exceptions'
OBJCXX='c++'
OBJCXXFLAGS=''
OBJC_LIBS='-lobjc '
OBJDUMP='false'
OBJEXT='o'
OPENMP_CFLAGS=''
OPENMP_CXXFLAGS=''
OPENMP_FCFLAGS='-fopenmp'
OPENMP_FFLAGS='-fopenmp'
OSF_SH_BUG='"${@}"'
OTOOL64=':'
OTOOL='otool'
PACKAGE='R'
PACKAGE_BUGREPORT='http://bugs.r-project.org'
PACKAGE_NAME='R'
PACKAGE_STRING='R 2.15.3'
PACKAGE_TARNAME='R'
PACKAGE_URL='http://www.r-project.org'
PACKAGE_VERSION='2.15.3'
PAGER='/usr/bin/less'
PAPERCONF='false'
PATH_SEPARATOR=':'
PDFLATEX=''
PDFTEX=''
PKGCONF='/usr/local/bin/pkg-config'
POSUB='po'
PRI_MACROS_BROKEN='0'
RANLIB='ranlib'
RBLAS_LDFLAGS='-install_name libRblas.dylib -headerpad_max_install_names'
READLINE_LIBS='-lreadline '
RLAPACK_LDFLAGS='-install_name libRlapack.dylib -compatibility_version 2.15.0 -current_version 2.15.3 -headerpad_max_install_names'
RMATH_HAVE_EXPM1='# define HAVE_EXPM1 1'
RMATH_HAVE_HYPOT='# define HAVE_HYPOT 1'
RMATH_HAVE_LOG1P='# define HAVE_LOG1P 1'
RMATH_HAVE_WORKING_LOG1P='# define HAVE_WORKING_LOG1P 1'
R_ARCH=''
R_BATCHSAVE=''
R_BROWSER='/usr/bin/open'
R_BZIPCMD='/usr/bin/bzip2'
R_CONFIG_ARGS=' '\''--prefix=/usr/local/Cellar/r/2.15.3'\'' '\''--with-aqua'\'' '\''--enable-R-framework'\'' '\''--with-lapack'\'' '\''CC=cc'\'' '\''F77=/usr/bin/gfortran'\'' '\''FFLAGS='\'' '\''CXX=c++'\'' '\''OBJC=cc'\'' '\''FC=/usr/bin/gfortran'\'' '\''FCFLAGS='\'''
R_DEFS=''
R_GZIPCMD='/usr/bin/gzip'
R_JAVA_LD_LIBRARY_PATH=''
R_LD_LIBRARY_PATH=''
R_OPENMP_CFLAGS=''
R_OPENMP_FFLAGS=''
R_OS='darwin12.3.0'
R_OSTYPE='unix'
R_PAPERSIZE='a4'
R_PDFVIEWER='/usr/bin/open'
R_PLATFORM='x86_64-apple-darwin12.3.0'
R_PRINTCMD='lpr'
R_PROFILING=''
R_RD4PDF='times,inconsolata,hyper'
R_SHELL='/bin/sh'
R_SYSTEM_ABI='osx,gcc,gxx,gfortran,?'
R_UNZIPCMD='/usr/bin/unzip'
R_XTRA_CFLAGS=''
R_XTRA_CPPFLAGS2='-I$(R_INCLUDE_DIR)'
R_XTRA_CPPFLAGS=''
R_XTRA_CXXFLAGS=''
R_XTRA_FFLAGS=''
R_XTRA_LIBS=''
R_ZIPCMD='/usr/bin/zip'
SAFE_FFLAGS=' -ffloat-store'
SED='/usr/local/Library/ENV/4.3/sed'
SET_MAKE=''
SHELL='/bin/sh'
SHLIB_CFLAGS=''
SHLIB_CXXFLAGS=''
SHLIB_CXXLD='c++'
SHLIB_CXXLDFLAGS='-dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress'
SHLIB_EXT='.so'
SHLIB_FCLD='/usr/bin/gfortran'
SHLIB_FCLDFLAGS='-dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress'
SHLIB_FFLAGS=''
SHLIB_LD='cc'
SHLIB_LDFLAGS='-dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress'
SHLIB_LIBADD=''
SHLIB_OPENMP_CFLAGS=''
SHLIB_OPENMP_CXXFLAGS=''
SHLIB_OPENMP_FCFLAGS=''
SHLIB_OPENMP_FFLAGS=''
STRIP='strip'
TAR='/usr/bin/gnutar'
TCLTK_CPPFLAGS='-I/System/Library/Frameworks/Tcl.framework/Versions/8.5/Headers -I/System/Library/Frameworks/Tk.framework/Versions/8.5/Headers '
TCLTK_LIBS='-F/System/Library/Frameworks -framework Tcl -F/System/Library/Frameworks -framework Tk '
TCL_CONFIG='/usr/lib/tclConfig.sh'
TEX=''
TEXI2DVI='/usr/bin/texi2dvi'
TEXI2DVICMD='/usr/bin/texi2dvi'
TIRPC_CPPFLAGS=''
TK_CONFIG='/usr/lib/tkConfig.sh'
USE_EXPORTFILES_FALSE=''
USE_EXPORTFILES_TRUE='#'
USE_EXTERNAL_BLAS_FALSE=''
USE_EXTERNAL_BLAS_TRUE='#'
USE_EXTERNAL_LAPACK_FALSE=''
USE_EXTERNAL_LAPACK_TRUE='#'
USE_ICU=''
USE_ICU_APPLE=''
USE_INCLUDED_LIBINTL='yes'
USE_MMAP_ZLIB_FALSE='#'
USE_MMAP_ZLIB_TRUE=''
USE_NLS='yes'
USE_NLS_FALSE='#'
USE_NLS_TRUE=''
USE_RECOMMENDED_PACKAGES_FALSE='#'
USE_RECOMMENDED_PACKAGES_TRUE=''
USE_VECLIB_G95FIX_FALSE=''
USE_VECLIB_G95FIX_TRUE='#'
VERSION='2.15.3'
WANT_R_FRAMEWORK_FALSE='#'
WANT_R_FRAMEWORK_TRUE=''
WANT_R_SHLIB_FALSE='#'
WANT_R_SHLIB_TRUE=''
WANT_R_STATIC_FALSE=''
WANT_R_STATIC_TRUE='#'
WHICH='/usr/bin/which'
WOE32DLL='no'
XGETTEXT=':'
XGETTEXT_015=':'
XMKMF=''
XTRA_INTL_CPPFLAGS='-I/System/Library/Frameworks/CoreFoundation.framework/Headers'
X_CFLAGS=''
X_EXTRA_LIBS=''
X_LIBS=' -lX11 -lXt -lXmu'
X_PRE_LIBS=' -lSM -lICE'
YACC='bison -y'
YFLAGS=''
ac_ct_CC='cc'
ac_ct_CXX=''
ac_ct_DUMPBIN=''
ac_ct_F77=''
ac_ct_FC=''
ac_ct_OBJC=''
bindir='${exec_prefix}/bin'
build='x86_64-apple-darwin12.3.0'
build_alias=''
build_cpu='x86_64'
build_os='darwin12.3.0'
build_vendor='apple'
config_opts=' '\''--prefix=/usr/local/Cellar/r/2.15.3'\'' '\''--with-aqua'\'' '\''--enable-R-framework'\'' '\''--with-lapack'\'' '\''CC=cc'\'' '\''F77=/usr/bin/gfortran'\'' '\''FFLAGS='\'' '\''CXX=c++'\'' '\''OBJC=cc'\'' '\''FC=/usr/bin/gfortran'\'' '\''FCFLAGS='\'''
datadir='${datarootdir}'
datarootdir='${prefix}/share'
docdir='${datarootdir}/doc/${PACKAGE_TARNAME}'
dvidir='${docdir}'
exec_prefix='${prefix}'
host='x86_64-apple-darwin12.3.0'
host_alias=''
host_cpu='x86_64'
host_os='darwin12.3.0'
host_vendor='apple'
htmldir='${docdir}'
includedir='${prefix}/include'
infodir='${datarootdir}/info'
libdir='${exec_prefix}/${LIBnn}'
libexecdir='${exec_prefix}/libexec'
localedir='${datarootdir}/locale'
localstatedir='${prefix}/var'
lt_ECHO='/bin/echo'
mandir='${datarootdir}/man'
mkdir_p='/usr/local/bin/gmkdir -p'
oldincludedir='/usr/include'
pdfdir='${docdir}'
prefix='/usr/local/Cellar/r/2.15.3'
program_transform_name='s,x,x,'
psdir='${docdir}'
r_arch=''
rdocdir='${rhome}/doc'
rincludedir='${rhome}/include'
rsharedir='${rhome}/share'
sbindir='${exec_prefix}/sbin'
sharedstatedir='${prefix}/com'
shlibpath_var='DYLD_LIBRARY_PATH'
striplib='strip -x'
stripstaticlib='strip -S'
sysconfdir='${prefix}/etc'
target_alias=''
use_aqua='yes'
use_tcltk='yes'
## ------------------- ##
## File substitutions. ##
## ------------------- ##
r_cc_lo_rules_frag='Makefrag.cc_lo'
r_cc_rules_frag='Makefrag.cc'
r_cxx_rules_frag='Makefrag.cxx'
r_objc_rules_frag='Makefrag.m'
## ----------- ##
## confdefs.h. ##
## ----------- ##
/* confdefs.h */
#define PACKAGE_NAME "R"
#define PACKAGE_TARNAME "R"
#define PACKAGE_VERSION "2.15.3"
#define PACKAGE_STRING "R 2.15.3"
#define PACKAGE_BUGREPORT "http://bugs.r-project.org"
#define PACKAGE_URL "http://www.r-project.org"
#define PACKAGE "R"
#define VERSION "2.15.3"
#define R_PLATFORM "x86_64-apple-darwin12.3.0"
#define R_CPU "x86_64"
#define R_VENDOR "apple"
#define R_OS "darwin12.3.0"
#define Unix 1
#define R_ARCH ""
#define STDC_HEADERS 1
#define HAVE_SYS_TYPES_H 1
#define HAVE_SYS_STAT_H 1
#define HAVE_STDLIB_H 1
#define HAVE_STRING_H 1
#define HAVE_MEMORY_H 1
#define HAVE_STRINGS_H 1
#define HAVE_INTTYPES_H 1
#define HAVE_STDINT_H 1
#define HAVE_UNISTD_H 1
#define __EXTENSIONS__ 1
#define _ALL_SOURCE 1
#define _GNU_SOURCE 1
#define _POSIX_PTHREAD_SEMANTICS 1
#define _TANDEM_SOURCE 1
#define HAVE_DLFCN_H 1
#define LT_OBJDIR ".libs/"
#define HAVE_LIBM 1
#define HAVE_READLINE_HISTORY_H 1
#define HAVE_READLINE_READLINE_H 1
#define HAVE_LIBREADLINE 1
#define HAVE_HISTORY_TRUNCATE_FILE 1
#define HAVE_RL_COMPLETION_MATCHES 1
#define STDC_HEADERS 1
#define HAVE_DIRENT_H 1
#define HAVE_SYS_WAIT_H 1
#define HAVE_ARPA_INET_H 1
#define HAVE_DLFCN_H 1
#define HAVE_FCNTL_H 1
#define HAVE_GLOB_H 1
#define HAVE_GRP_H 1
#define HAVE_NETDB_H 1
#define HAVE_NETINET_IN_H 1
#define HAVE_PWD_H 1
#define HAVE_STRINGS_H 1
#define HAVE_SYS_PARAM_H 1
#define HAVE_SYS_RESOURCE_H 1
#define HAVE_SYS_SELECT_H 1
#define HAVE_SYS_SOCKET_H 1
#define HAVE_SYS_STAT_H 1
#define HAVE_SYS_TIME_H 1
#define HAVE_SYS_TIMES_H 1
#define HAVE_SYS_UTSNAME_H 1
#define HAVE_UNISTD_H 1
#define HAVE_UTIME_H 1
#define HAVE_ERRNO_H 1
#define HAVE_INTTYPES_H 1
#define HAVE_LIMITS_H 1
#define HAVE_LOCALE_H 1
#define HAVE_STDARG_H 1
#define HAVE_STDBOOL_H 1
#define HAVE_STDINT_H 1
#define HAVE_STRING_H 1
#define HAVE_DECL_SIGSETJMP 1
#define HAVE_DECL_SIGLONGJMP 1
#define HAVE_POSIX_SETJMP 1
#define RETSIGTYPE void
#define HAVE_DECL_SIZE_MAX 1
#define R_SOCKLEN_T socklen_t
#define HAVE_STACK_T 1
#define HAVE_INTPTR_T 1
#define HAVE_UINTPTR_T 1
#define R_INLINE inline
#define SIZEOF_INT 4
#define INT_32_BITS 1
#define SIZEOF_LONG 8
#define SIZEOF_LONG_LONG 8
#define SIZEOF_DOUBLE 8
#define SIZEOF_LONG_DOUBLE 16
#define SIZEOF_SIZE_T 8
#define F77_FUNC(name,NAME) name ## _
#define F77_FUNC_(name,NAME) name ## _
#define HAVE_F77_UNDERSCORE 1
#define HAVE_FORTRAN_DOUBLE_COMPLEX 1
#define OBJC_NEXT_RUNTIME 1
#define HAVE_NO_SYMBOL_UNDERSCORE 1
#define SHLIB_EXT ".so"
#define HAVE_OFF_T 1
#define HAVE_ALLOCA_H 1
#define HAVE_ALLOCA 1
#define HAVE_DECL_ALLOCA 1
#define HAVE_EXPM1 1
#define HAVE_HYPOT 1
#define HAVE_LOG1P 1
#define HAVE_LOG2 1
#define HAVE_LOG10 1
#define HAVE_NEARBYINT 1
#define HAVE_NEARBYINTL 1
#define HAVE_POWL 1
#define HAVE_RINT 1
#define HAVE_RINTL 1
#define HAVE_VA_COPY 1
#define HAVE_ISBLANK 1
#define HAVE_FSEEKO 1
#define HAVE_FTELLO 1
#define HAVE_MATHERR 1
#define HAVE_FCNTL 1
#define HAVE_GETGRGID 1
#define HAVE_GETPWUID 1
#define HAVE_KILL 1
#define HAVE_SIGACTION 1
#define HAVE_SIGALTSTACK 1
#define HAVE_SIGEMPTYSET 1
#define HAVE_FDOPEN 1
#define HAVE_POPEN 1
#define HAVE_SETENV 1
#define HAVE_UNSETENV 1
#define HAVE_GETRLIMIT 1
#define HAVE_GETRUSAGE 1
#define HAVE_GETPRIORITY 1
#define HAVE_CHMOD 1
#define HAVE_MKFIFO 1
#define HAVE_STAT 1
#define HAVE_UMASK 1
#define HAVE_GETTIMEOFDAY 1
#define HAVE_UTIMES 1
#define HAVE_TIMES 1
#define HAVE_ACCESS 1
#define HAVE_CHDIR 1
#define HAVE_EXECV 1
#define HAVE_FTRUNCATE 1
#define HAVE_GETCWD 1
#define HAVE_GETEUID 1
#define HAVE_GETUID 1
#define HAVE_LINK 1
#define HAVE_READLINK 1
#define HAVE_SYMLINK 1
#define HAVE_SYSCONF 1
#define HAVE_UTIME 1
#define HAVE_PUTENV 1
#define HAVE_DECL_PUTENV 1
#define HAVE_VASPRINTF 1
#define HAVE_DECL_VASPRINTF 1
#define HAVE_REALPATH 1
#define HAVE_DECL_REALPATH 1
#define HAVE_GLOB 1
#define HAVE_OFF_T 1
#define HAVE_ISNAN 1
#define HAVE_DECL_ISFINITE 1
#define HAVE_DECL_ISNAN 1
#define IEEE_754 1
#define HAVE_LANGINFO_CODESET 1
#define HAVE_MKDTEMP 1
#define HAVE_STRDUP 1
#define HAVE_STRNCASECMP 1
#define HAVE_DECL_MKDTEMP 1
#define HAVE_DECL_STRDUP 1
#define HAVE_DECL_STRNCASECMP 1
#define HAVE_WORKING_CALLOC 1
#define HAVE_WORKING_ISFINITE 1
#define HAVE_WORKING_LOG1P 1
#define HAVE_WORKING_FTELL 1
#define HAVE_WORKING_SIGACTION 1
#define HAVE_CABS 1
#define HAVE_CARG 1
#define HAVE_CEXP 1
#define HAVE_CLOG 1
#define HAVE_CSQRT 1
#define HAVE_CPOW 1
#define HAVE_CCOS 1
#define HAVE_CSIN 1
#define HAVE_CTAN 1
#define HAVE_CACOS 1
#define HAVE_CASIN 1
#define HAVE_CATAN 1
#define HAVE_CCOSH 1
#define HAVE_CSINH 1
#define HAVE_CTANH 1
#define HAVE_VECLIB_FW 1
#define HAVE_ICONV_H 1
#define HAVE_ICONV 1
#define HAVE_ICONVLIST 1
#define HAVE_ICONV 1
#define ICONV_CONST
#define HAVE_WCHAR_H 1
#define HAVE_WCTYPE_H 1
#define HAVE_MBRTOWC 1
#define HAVE_WCRTOMB 1
#define HAVE_WCSCOLL 1
#define HAVE_WCSFTIME 1
#define HAVE_WCSTOD 1
#define HAVE_MBSTOWCS 1
#define HAVE_WCSTOMBS 1
#define HAVE_WCTRANS 1
#define HAVE_ISWBLANK 1
#define HAVE_WCTYPE 1
#define HAVE_ISWCTYPE 1
#define HAVE_WCTRANS_T 1
#define HAVE_MBSTATE_T 1
#define HAVE_LIBICUCORE 1
#define USE_ICU_APPLE 1
#define USE_ICU 1
#define HAVE_X11 1
#define HAVE_KEYSYM 1
#define HAVE_X11_Xmu 1
#define HAVE_WORKING_CAIRO 1
#define HAVE_CAIRO_PDF 1
#define HAVE_CAIRO_PS 1
#define HAVE_CAIRO_SVG 1
#define HAVE_COREFOUNDATION_FW 1
#define HAVE_AQUA 1
#define HAVE_TCLTK 1
#define HAVE_BSD_NETWORKING 1
#define HAVE_SOCKETS 1
#define HAVE_INTERNET 1
#define SUPPORT_LIBXML 1
#define HAVE_JPEG 1
#define HAVE_PNG 1
#define HAVE_TIFFIO_H 1
#define HAVE_TIFF 1
#define HAVE_LZMA_H 1
#define HAVE_LZMA 1
#define HAVE_POSIX_LEAPSECONDS 1
#define HAVE_SYS_TIME_H 1
#define HAVE_STDLIB_H 1
#define HAVE_UNISTD_H 1
#define HAVE_SYS_PARAM_H 1
#define HAVE_STRUCT_STAT_ST_ATIMESPEC_TV_NSEC 1
#define HAVE_SETITIMER 1
#define R_PROFILING 1
#define HAVE_FSEEKO 1
#define NVALGRIND 1
#define VALGRIND_LEVEL 0
#define HAVE_KERN_USRSTACK 1
#define R_PRINTCMD "lpr"
#define HAVE_VISIBILITY 1
#define HAVE_STDINT_H_WITH_UINTMAX 1
#define HAVE_GETPAGESIZE 1
#define HAVE_MMAP 1
#define INTDIV0_RAISES_SIGFPE 1
#define HAVE_INTTYPES_H_WITH_UINTMAX 1
#define HAVE_UNSIGNED_LONG_LONG_INT 1
#define HAVE_UNSIGNED_LONG_LONG 1
#define HAVE_UINTMAX_T 1
#define HAVE_INTTYPES_H 1
#define HAVE_BUILTIN_EXPECT 1
#define HAVE_INTTYPES_H 1
#define HAVE_LIMITS_H 1
#define HAVE_UNISTD_H 1
#define HAVE_SYS_PARAM_H 1
#define HAVE_GETCWD 1
#define HAVE_GETEGID 1
#define HAVE_GETEUID 1
#define HAVE_GETGID 1
#define HAVE_GETUID 1
#define HAVE_MUNMAP 1
#define HAVE_STPCPY 1
#define HAVE_STRCASECMP 1
#define HAVE_STRDUP 1
#define HAVE_STRTOUL 1
#define HAVE_TSEARCH 1
#define HAVE_DECL_FEOF_UNLOCKED 1
#define HAVE_DECL_FGETS_UNLOCKED 0
#define HAVE_ICONV 1
#define ICONV_CONST
#define HAVE_LONG_LONG_INT 1
#define HAVE_LONG_DOUBLE 1
#define HAVE_WCHAR_T 1
#define HAVE_WINT_T 1
#define HAVE_INTMAX_T 1
#define HAVE_POSIX_PRINTF 1
#define HAVE_STDINT_H 1
#define HAVE_STDINT_H 1
#define HAVE_CFPREFERENCESCOPYAPPVALUE 1
#define HAVE_CFLOCALECOPYCURRENT 1
#define HAVE_STDDEF_H 1
#define HAVE_STDLIB_H 1
#define HAVE_STRING_H 1
#define HAVE_ASPRINTF 1
#define HAVE_FWPRINTF 1
#define HAVE_PUTENV 1
#define HAVE_SETENV 1
#define HAVE_SETLOCALE 1
#define HAVE_SNPRINTF 1
#define HAVE_WCSLEN 1
#define HAVE_DECL__SNPRINTF 0
#define HAVE_DECL__SNWPRINTF 0
#define HAVE_DECL_GETC_UNLOCKED 1
#define HAVE_LANGINFO_CODESET 1
#define HAVE_LC_MESSAGES 1
#define HAVE_CFPREFERENCESCOPYAPPVALUE 1
#define HAVE_CFLOCALECOPYCURRENT 1
#define ENABLE_NLS 1
configure: exit 0
## ---------------------- ##
## Running config.status. ##
## ---------------------- ##
This file was extended by R config.status 2.15.3, which was
generated by GNU Autoconf 2.69. Invocation command line was
CONFIG_FILES =
CONFIG_HEADERS =
CONFIG_LINKS =
CONFIG_COMMANDS =
$ ./config.status src/unix/Makefile
on hnt-up-dhcp-109-007.wharton.upenn.edu
config.status:1859: creating src/unix/Makefile
## ---------------------- ##
## Running config.status. ##
## ---------------------- ##
This file was extended by R config.status 2.15.3, which was
generated by GNU Autoconf 2.69. Invocation command line was
CONFIG_FILES =
CONFIG_HEADERS =
CONFIG_LINKS =
CONFIG_COMMANDS =
$ ./config.status src/main/Makefile
on hnt-up-dhcp-109-007.wharton.upenn.edu
config.status:1859: creating src/main/Makefile
This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake.
It was created by R configure 2.15.3, which was
generated by GNU Autoconf 2.69. Invocation command line was
$ ./configure --prefix=/usr/local/Cellar/r/2.15.3 --with-aqua --enable-R-framework --with-lapack
## --------- ##
## Platform. ##
## --------- ##
hostname = hnt-up-dhcp-109-007.wharton.upenn.edu
uname -m = x86_64
uname -r = 12.3.0
uname -s = Darwin
uname -v = Darwin Kernel Version 12.3.0: Sun Jan 6 22:37:10 PST 2013; root:xnu-2050.22.13~1/RELEASE_X86_64
/usr/bin/uname -p = i386
/bin/uname -X = unknown
/bin/arch = unknown
/usr/bin/arch -k = unknown
/usr/convex/getsysinfo = unknown
/usr/bin/hostinfo = Mach kernel version:
Darwin Kernel Version 12.3.0: Sun Jan 6 22:37:10 PST 2013; root:xnu-2050.22.13~1/RELEASE_X86_64
Kernel configured for up to 4 processors.
2 processors are physically available.
4 processors are logically available.
Processor type: i486 (Intel 80486)
Processors active: 0 1 2 3
Primary memory available: 4.00 gigabytes
Default processor set: 186 tasks, 1072 threads, 4 processors
Load average: 1.12, Mach factor: 2.90
/bin/machine = unknown
/usr/bin/oslevel = unknown
/bin/universe = unknown
PATH: /usr/texbin
PATH: /usr/local/lib/python2.7/site-packages
PATH: /usr/local/share/python
PATH: /usr/local/lib/python3.2/site-packages
PATH: /usr/local/share/python3
PATH: /usr/local/bin
PATH: /usr/local/sbin
PATH: /usr/bin
PATH: /bin
PATH: /usr/sbin
PATH: /sbin
PATH: /Users/Andres/.rvm/bin
PATH: /usr/local/Library/Contributions/cmd
PATH: /opt/X11/bin
PATH: /usr/local/bin
PATH: /usr/local/bin
## ----------- ##
## Core tests. ##
## ----------- ##
configure:3636: checking build system type
configure:3650: result: x86_64-apple-darwin12.3.0
configure:3670: checking host system type
configure:3683: result: x86_64-apple-darwin12.3.0
configure:4385: checking for pwd
configure:4403: found /bin/pwd
configure:4416: result: /bin/pwd
configure:4424: checking whether builddir is srcdir
configure:4432: result: yes
configure:4437: checking for working aclocal
configure:4441: result: found
configure:4450: checking for working autoconf
configure:4454: result: found
configure:4463: checking for working automake
configure:4467: result: found
configure:4476: checking for working autoheader
configure:4480: result: found
configure:4493: checking for gawk
configure:4509: found /usr/local/bin/gawk
configure:4520: result: gawk
configure:4531: checking whether ln -s works
configure:4535: result: yes
configure:4546: checking for bison
configure:4562: found /usr/bin/bison
configure:4573: result: bison -y
configure:4589: checking for ar
configure:4605: found /usr/bin/ar
configure:4616: result: ar
configure:4644: checking for a BSD-compatible install
configure:4712: result: /usr/local/bin/ginstall -c
configure:4747: checking for sed
configure:4766: found /usr/bin/sed
configure:4778: result: /usr/bin/sed
configure:4796: checking for which
configure:4814: found /usr/bin/which
configure:4826: result: /usr/bin/which
configure:4846: checking for less
configure:4864: found /usr/bin/less
configure:4876: result: /usr/bin/less
configure:4899: checking for gtar
configure:4932: result: no
configure:4899: checking for gnutar
configure:4917: found /usr/bin/gnutar
configure:4929: result: /usr/bin/gnutar
configure:4951: checking for tex
configure:4969: found /usr/texbin/tex
configure:4981: result: /usr/texbin/tex
configure:4996: checking for pdftex
configure:5014: found /usr/texbin/pdftex
configure:5026: result: /usr/texbin/pdftex
configure:5046: checking for pdflatex
configure:5064: found /usr/texbin/pdflatex
configure:5076: result: /usr/texbin/pdflatex
configure:5096: checking for makeindex
configure:5114: found /usr/texbin/makeindex
configure:5126: result: /usr/texbin/makeindex
configure:5141: checking for makeinfo
configure:5159: found /usr/bin/makeinfo
configure:5171: result: /usr/bin/makeinfo
configure:5183: checking whether makeinfo version is at least 4.7
configure:5203: result: yes
configure:5210: checking for ginstall-info
configure:5243: result: no
configure:5210: checking for install-info
configure:5228: found /usr/bin/install-info
configure:5240: result: /usr/bin/install-info
configure:5272: checking for texi2dvi
configure:5290: found /usr/bin/texi2dvi
configure:5302: result: /usr/bin/texi2dvi
configure:5322: checking for kpsewhich
configure:5340: found /usr/texbin/kpsewhich
configure:5352: result: /usr/texbin/kpsewhich
configure:5383: checking for unzip
configure:5401: found /usr/bin/unzip
configure:5413: result: /usr/bin/unzip
configure:5429: checking for zip
configure:5447: found /usr/bin/zip
configure:5459: result: /usr/bin/zip
configure:5475: checking for gzip
configure:5493: found /usr/bin/gzip
configure:5505: result: /usr/bin/gzip
configure:5521: checking for bzip2
configure:5539: found /usr/bin/bzip2
configure:5551: result: /usr/bin/bzip2
configure:5569: checking for firefox
configure:5602: result: no
configure:5569: checking for mozilla
configure:5602: result: no
configure:5569: checking for galeon
configure:5602: result: no
configure:5569: checking for opera
configure:5602: result: no
configure:5569: checking for xdg-open
configure:5602: result: no
configure:5569: checking for kfmclient
configure:5602: result: no
configure:5569: checking for gnome-moz-remote
configure:5602: result: no
configure:5569: checking for open
configure:5587: found /usr/bin/open
configure:5599: result: /usr/bin/open
configure:5616: result: using default browser ... /usr/bin/open
configure:5626: checking for acroread
configure:5659: result: no
configure:5626: checking for acroread4
configure:5659: result: no
configure:5626: checking for xdg-open
configure:5659: result: no
configure:5626: checking for evince
configure:5659: result: no
configure:5626: checking for xpdf
configure:5659: result: no
configure:5626: checking for gv
configure:5659: result: no
configure:5626: checking for gnome-gv
configure:5659: result: no
configure:5626: checking for ggv
configure:5659: result: no
configure:5626: checking for okular
configure:5659: result: no
configure:5626: checking for kpdf
configure:5659: result: no
configure:5626: checking for open
configure:5644: found /usr/bin/open
configure:5656: result: /usr/bin/open
configure:5677: checking for notangle
configure:5708: result: false
configure:5720: checking for pkg-config
configure:5739: found /usr/local/bin/pkg-config
configure:5751: result: /usr/local/bin/pkg-config
configure:5808: checking for gcc
configure:5835: result: /usr/bin/clang
configure:6064: checking for C compiler version
configure:6073: /usr/bin/clang --version >&5
Apple LLVM version 4.2 (clang-425.0.27) (based on LLVM 3.2svn)
Target: x86_64-apple-darwin12.3.0
Thread model: posix
configure:6084: $? = 0
configure:6073: /usr/bin/clang -v >&5
Apple LLVM version 4.2 (clang-425.0.27) (based on LLVM 3.2svn)
Target: x86_64-apple-darwin12.3.0
Thread model: posix
configure:6084: $? = 0
configure:6073: /usr/bin/clang -V >&5
clang: error: argument to '-V' is missing (expected 1 value)
clang: error: no input files
configure:6084: $? = 1
configure:6073: /usr/bin/clang -qversion >&5
clang: error: no input files
configure:6084: $? = 1
configure:6104: checking whether the C compiler works
configure:6126: /usr/bin/clang -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib conftest.c >&5
configure:6130: $? = 0
configure:6178: result: yes
configure:6181: checking for C compiler default output file name
configure:6183: result: a.out
configure:6189: checking for suffix of executables
configure:6196: /usr/bin/clang -o conftest -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib conftest.c >&5
configure:6200: $? = 0
configure:6222: result:
configure:6244: checking whether we are cross compiling
configure:6252: /usr/bin/clang -o conftest -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib conftest.c >&5
configure:6256: $? = 0
configure:6263: ./conftest
configure:6267: $? = 0
configure:6282: result: no
configure:6287: checking for suffix of object files
configure:6309: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:6313: $? = 0
configure:6334: result: o
configure:6338: checking whether we are using the GNU C compiler
configure:6357: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:6357: $? = 0
configure:6366: result: yes
configure:6375: checking whether /usr/bin/clang accepts -g
configure:6395: /usr/bin/clang -c -g -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:6395: $? = 0
configure:6436: result: yes
configure:6453: checking for /usr/bin/clang option to accept ISO C89
configure:6516: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:6516: $? = 0
configure:6529: result: none needed
configure:6556: checking how to run the C preprocessor
configure:6587: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c
configure:6587: $? = 0
configure:6601: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c
conftest.c:17:10: fatal error: 'ac_nonexistent.h' file not found
#include <ac_nonexistent.h>
^
1 error generated.
configure:6601: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:6626: result: /usr/bin/clang -E
configure:6646: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c
configure:6646: $? = 0
configure:6660: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c
conftest.c:17:10: fatal error: 'ac_nonexistent.h' file not found
#include <ac_nonexistent.h>
^
1 error generated.
configure:6660: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:6689: checking for grep that handles long lines and -e
configure:6747: result: /usr/bin/grep
configure:6752: checking for egrep
configure:6814: result: /usr/bin/grep -E
configure:6820: checking whether /usr/bin/clang needs -traditional
conftest.c:17:10: fatal error: 'termio.h' file not found
#include <termio.h>
^
1 error generated.
configure:6854: result: no
configure:6866: checking how to run the C preprocessor
configure:6936: result: /usr/bin/clang -E
configure:6956: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c
configure:6956: $? = 0
configure:6970: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c
conftest.c:17:10: fatal error: 'ac_nonexistent.h' file not found
#include <ac_nonexistent.h>
^
1 error generated.
configure:6970: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:7042: result: defining F77 to be /usr/local/bin/gfortran
configure:7214: checking for Fortran 77 compiler version
configure:7223: /usr/local/bin/gfortran --version >&5
GNU Fortran (GCC) 4.8.0
Copyright (C) 2013 Free Software Foundation, Inc.
GNU Fortran comes with NO WARRANTY, to the extent permitted by law.
You may redistribute copies of GNU Fortran
under the terms of the GNU General Public License.
For more information about these matters, see the file named COPYING
configure:7234: $? = 0
configure:7223: /usr/local/bin/gfortran -v >&5
Using built-in specs.
COLLECT_GCC=/usr/local/bin/gfortran
COLLECT_LTO_WRAPPER=/usr/local/Cellar/gfortran/4.8.0/gfortran/libexec/gcc/x86_64-apple-darwin12.3.0/4.8.0/lto-wrapper
Target: x86_64-apple-darwin12.3.0
Configured with: ../configure --enable-languages=fortran --prefix=/usr/local/Cellar/gfortran/4.8.0/gfortran --datarootdir=/usr/local/Cellar/gfortran/4.8.0/share --bindir=/usr/local/Cellar/gfortran/4.8.0/bin --with-system-zlib --with-gmp=/usr/local/opt/gmp --with-mpfr=/usr/local/opt/mpfr --with-mpc=/usr/local/opt/libmpc --enable-checking=release --disable-stage1-checking --disable-build-poststage1-with-cxx --disable-libstdcxx-pc --disable-nls
Thread model: posix
gcc version 4.8.0 (GCC)
configure:7234: $? = 0
configure:7223: /usr/local/bin/gfortran -V >&5
gfortran: error: unrecognized command line option '-V'
gfortran: fatal error: no input files
compilation terminated.
configure:7234: $? = 1
configure:7223: /usr/local/bin/gfortran -qversion >&5
gfortran: error: unrecognized command line option '-qversion'
gfortran: fatal error: no input files
compilation terminated.
configure:7234: $? = 1
configure:7243: checking whether we are using the GNU Fortran 77 compiler
configure:7256: /usr/local/bin/gfortran -c -Os -w -pipe -mmacosx-version-min=10.8 core2 -msse4 conftest.F >&5
gfortran: error: core2: No such file or directory
configure:7256: $? = 1
configure: failed program was:
| program main
| #ifndef __GNUC__
| choke me
| #endif
|
| end
configure:7265: result: no
configure:7271: checking whether /usr/local/bin/gfortran accepts -g
configure:7282: /usr/local/bin/gfortran -c -g conftest.f >&5
configure:7282: $? = 0
configure:7290: result: yes
configure:7435: checking for C++ compiler version
configure:7444: /usr/bin/clang++ --version >&5
Apple LLVM version 4.2 (clang-425.0.27) (based on LLVM 3.2svn)
Target: x86_64-apple-darwin12.3.0
Thread model: posix
configure:7455: $? = 0
configure:7444: /usr/bin/clang++ -v >&5
Apple LLVM version 4.2 (clang-425.0.27) (based on LLVM 3.2svn)
Target: x86_64-apple-darwin12.3.0
Thread model: posix
configure:7455: $? = 0
configure:7444: /usr/bin/clang++ -V >&5
clang: error: argument to '-V' is missing (expected 1 value)
clang: error: no input files
configure:7455: $? = 1
configure:7444: /usr/bin/clang++ -qversion >&5
clang: error: no input files
configure:7455: $? = 1
configure:7459: checking whether we are using the GNU C++ compiler
configure:7478: /usr/bin/clang++ -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.cpp >&5
configure:7478: $? = 0
configure:7487: result: yes
configure:7496: checking whether /usr/bin/clang++ accepts -g
configure:7516: /usr/bin/clang++ -c -g -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.cpp >&5
configure:7516: $? = 0
configure:7557: result: yes
configure:7585: checking how to run the C++ preprocessor
configure:7612: /usr/bin/clang++ -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.cpp
configure:7612: $? = 0
configure:7626: /usr/bin/clang++ -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.cpp
conftest.cpp:17:10: fatal error: 'ac_nonexistent.h' file not found
#include <ac_nonexistent.h>
^
1 error generated.
configure:7626: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:7651: result: /usr/bin/clang++ -E
configure:7671: /usr/bin/clang++ -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.cpp
configure:7671: $? = 0
configure:7685: /usr/bin/clang++ -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.cpp
conftest.cpp:17:10: fatal error: 'ac_nonexistent.h' file not found
#include <ac_nonexistent.h>
^
1 error generated.
configure:7685: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:7713: checking whether __attribute__((visibility())) is supported
configure:7724: /usr/bin/clang -Werror -S conftest.c -o conftest.s 1>&5
configure:7727: $? = 0
configure:7736: result: no
configure:7747: checking whether /usr/bin/clang accepts -fvisibility
configure:7763: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -fvisibility=hidden -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:7763: $? = 0
configure:7770: result: yes
configure:7795: checking whether /usr/local/bin/gfortran accepts -fvisibility
configure:7805: /usr/local/bin/gfortran -c -Os -w -pipe -mmacosx-version-min=10.8 core2 -msse4 -fvisibility=hidden conftest.f >&5
gfortran: error: core2: No such file or directory
configure:7805: $? = 1
configure: failed program was:
| program main
|
| end
configure:7812: result: no
configure:7835: checking for ANSI C header files
configure:7855: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:7855: $? = 0
configure:7928: /usr/bin/clang -o conftest -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib conftest.c >&5
configure:7928: $? = 0
configure:7928: ./conftest
configure:7928: $? = 0
configure:7939: result: yes
configure:7952: checking for sys/types.h
configure:7952: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:7952: $? = 0
configure:7952: result: yes
configure:7952: checking for sys/stat.h
configure:7952: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:7952: $? = 0
configure:7952: result: yes
configure:7952: checking for stdlib.h
configure:7952: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:7952: $? = 0
configure:7952: result: yes
configure:7952: checking for string.h
configure:7952: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:7952: $? = 0
configure:7952: result: yes
configure:7952: checking for memory.h
configure:7952: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:7952: $? = 0
configure:7952: result: yes
configure:7952: checking for strings.h
configure:7952: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:7952: $? = 0
configure:7952: result: yes
configure:7952: checking for inttypes.h
configure:7952: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:7952: $? = 0
configure:7952: result: yes
configure:7952: checking for stdint.h
configure:7952: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:7952: $? = 0
configure:7952: result: yes
configure:7952: checking for unistd.h
configure:7952: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:7952: $? = 0
configure:7952: result: yes
configure:7965: checking minix/config.h usability
configure:7965: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
conftest.c:60:10: fatal error: 'minix/config.h' file not found
#include <minix/config.h>
^
1 error generated.
configure:7965: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <minix/config.h>
configure:7965: result: no
configure:7965: checking minix/config.h presence
configure:7965: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c
conftest.c:27:10: fatal error: 'minix/config.h' file not found
#include <minix/config.h>
^
1 error generated.
configure:7965: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| /* end confdefs.h. */
| #include <minix/config.h>
configure:7965: result: no
configure:7965: checking for minix/config.h
configure:7965: result: no
configure:7986: checking whether it is safe to define __EXTENSIONS__
configure:8004: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:8004: $? = 0
configure:8011: result: yes
configure:8133: checking for Objective C compiler version
configure:8142: /usr/bin/clang --version >&5
Apple LLVM version 4.2 (clang-425.0.27) (based on LLVM 3.2svn)
Target: x86_64-apple-darwin12.3.0
Thread model: posix
configure:8153: $? = 0
configure:8142: /usr/bin/clang -v >&5
Apple LLVM version 4.2 (clang-425.0.27) (based on LLVM 3.2svn)
Target: x86_64-apple-darwin12.3.0
Thread model: posix
configure:8153: $? = 0
configure:8142: /usr/bin/clang -V >&5
clang: error: argument to '-V' is missing (expected 1 value)
clang: error: no input files
configure:8153: $? = 1
configure:8142: /usr/bin/clang -qversion >&5
clang: error: no input files
configure:8153: $? = 1
configure:8157: checking whether we are using the GNU Objective C compiler
configure:8176: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.m >&5
configure:8176: $? = 0
configure:8185: result: yes
configure:8194: checking whether /usr/bin/clang accepts -g
configure:8214: /usr/bin/clang -c -g -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.m >&5
configure:8214: $? = 0
configure:8255: result: yes
configure:8314: checking for Objective C++ compiler
configure:8320: result: trying some possibilities
configure:8323: checking whether /usr/bin/clang++ can compile ObjC++
running: /usr/bin/clang++ -c conftest.mm -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8
configure:8351: result: yes
configure:8455: result: /usr/bin/clang++
configure:8524: checking for a sed that does not truncate output
configure:8588: result: /usr/bin/sed
configure:8606: checking for fgrep
configure:8668: result: /usr/bin/grep -F
configure:8696: checking for ld used by /usr/bin/clang
configure:8763: result: /usr/bin/ld
configure:8770: checking if the linker (/usr/bin/ld) is GNU ld
configure:8785: result: no
configure:8797: checking for BSD- or MS-compatible name lister (nm)
configure:8846: result: /usr/bin/nm
configure:8964: checking the name lister (/usr/bin/nm) interface
configure:8971: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:8974: /usr/bin/nm "conftest.o"
configure:8977: output
0000000000000000 S _some_variable
configure:8984: result: BSD nm
configure:8988: checking the maximum length of command line arguments
configure:9108: result: 196608
configure:9125: checking whether the shell understands some XSI constructs
configure:9135: result: yes
configure:9139: checking whether the shell understands "+="
configure:9145: result: yes
configure:9180: checking for /usr/bin/ld option to reload object files
configure:9187: result: -r
configure:9256: checking for objdump
configure:9286: result: no
configure:9315: checking how to recognize dependent libraries
configure:9511: result: pass_all
configure:9676: checking for strip
configure:9692: found /usr/bin/strip
configure:9703: result: strip
configure:9775: checking for ranlib
configure:9791: found /usr/bin/ranlib
configure:9802: result: ranlib
configure:9892: checking command to parse /usr/bin/nm output from /usr/bin/clang object
configure:10010: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:10013: $? = 0
configure:10017: /usr/bin/nm conftest.o \| sed -n -e 's/^.*[ ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' \> conftest.nm
configure:10020: $? = 0
cannot find nm_test_var in conftest.nm
configure:10010: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:10013: $? = 0
configure:10017: /usr/bin/nm conftest.o \| sed -n -e 's/^.*[ ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*_\([_A-Za-z][_A-Za-z0-9]*\)$/\1 _\2 \2/p' \> conftest.nm
configure:10020: $? = 0
configure:10074: /usr/bin/clang -o conftest -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib conftest.c conftstm.o >&5
configure:10077: $? = 0
configure:10115: result: ok
configure:10186: checking for dsymutil
configure:10202: found /usr/bin/dsymutil
configure:10213: result: dsymutil
configure:10278: checking for nmedit
configure:10294: found /usr/bin/nmedit
configure:10305: result: nmedit
configure:10370: checking for lipo
configure:10386: found /usr/bin/lipo
configure:10397: result: lipo
configure:10462: checking for otool
configure:10478: found /usr/bin/otool
configure:10489: result: otool
configure:10554: checking for otool64
configure:10584: result: no
configure:10629: checking for -single_module linker flag
/usr/bin/clang -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib -o libconftest.dylib -dynamiclib -Wl,-single_module conftest.c
configure:10656: result: yes
configure:10658: checking for -exported_symbols_list linker flag
configure:10678: /usr/bin/clang -o conftest -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib -Wl,-exported_symbols_list,conftest.sym conftest.c >&5
configure:10678: $? = 0
configure:10688: result: yes
configure:10727: checking for dlfcn.h
configure:10727: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:10727: $? = 0
configure:10727: result: yes
configure:10852: checking for C++ compiler version
configure:10861: /usr/bin/clang++ --version >&5
Apple LLVM version 4.2 (clang-425.0.27) (based on LLVM 3.2svn)
Target: x86_64-apple-darwin12.3.0
Thread model: posix
configure:10872: $? = 0
configure:10861: /usr/bin/clang++ -v >&5
Apple LLVM version 4.2 (clang-425.0.27) (based on LLVM 3.2svn)
Target: x86_64-apple-darwin12.3.0
Thread model: posix
configure:10872: $? = 0
configure:10861: /usr/bin/clang++ -V >&5
clang: error: argument to '-V' is missing (expected 1 value)
clang: error: no input files
configure:10872: $? = 1
configure:10861: /usr/bin/clang++ -qversion >&5
clang: error: no input files
configure:10872: $? = 1
configure:10876: checking whether we are using the GNU C++ compiler
configure:10904: result: yes
configure:10913: checking whether /usr/bin/clang++ accepts -g
configure:10974: result: yes
configure:11005: checking how to run the C++ preprocessor
configure:11071: result: /usr/bin/clang++ -E
configure:11091: /usr/bin/clang++ -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.cpp
configure:11091: $? = 0
configure:11105: /usr/bin/clang++ -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.cpp
conftest.cpp:33:10: fatal error: 'ac_nonexistent.h' file not found
#include <ac_nonexistent.h>
^
1 error generated.
configure:11105: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:11246: checking for Fortran 77 compiler version
configure:11255: /usr/local/bin/gfortran --version >&5
GNU Fortran (GCC) 4.8.0
Copyright (C) 2013 Free Software Foundation, Inc.
GNU Fortran comes with NO WARRANTY, to the extent permitted by law.
You may redistribute copies of GNU Fortran
under the terms of the GNU General Public License.
For more information about these matters, see the file named COPYING
configure:11266: $? = 0
configure:11255: /usr/local/bin/gfortran -v >&5
Using built-in specs.
COLLECT_GCC=/usr/local/bin/gfortran
COLLECT_LTO_WRAPPER=/usr/local/Cellar/gfortran/4.8.0/gfortran/libexec/gcc/x86_64-apple-darwin12.3.0/4.8.0/lto-wrapper
Target: x86_64-apple-darwin12.3.0
Configured with: ../configure --enable-languages=fortran --prefix=/usr/local/Cellar/gfortran/4.8.0/gfortran --datarootdir=/usr/local/Cellar/gfortran/4.8.0/share --bindir=/usr/local/Cellar/gfortran/4.8.0/bin --with-system-zlib --with-gmp=/usr/local/opt/gmp --with-mpfr=/usr/local/opt/mpfr --with-mpc=/usr/local/opt/libmpc --enable-checking=release --disable-stage1-checking --disable-build-poststage1-with-cxx --disable-libstdcxx-pc --disable-nls
Thread model: posix
gcc version 4.8.0 (GCC)
configure:11266: $? = 0
configure:11255: /usr/local/bin/gfortran -V >&5
gfortran: error: unrecognized command line option '-V'
gfortran: fatal error: no input files
compilation terminated.
configure:11266: $? = 1
configure:11255: /usr/local/bin/gfortran -qversion >&5
gfortran: error: unrecognized command line option '-qversion'
gfortran: fatal error: no input files
compilation terminated.
configure:11266: $? = 1
configure:11275: checking whether we are using the GNU Fortran 77 compiler
configure:11297: result: no
configure:11303: checking whether /usr/local/bin/gfortran accepts -g
configure:11322: result: yes
configure:11500: checking for objdir
configure:11515: result: .libs
configure:11811: checking if /usr/bin/clang supports -fno-rtti -fno-exceptions
configure:11829: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fno-rtti -fno-exceptions conftest.c >&5
configure:11833: $? = 0
configure:11846: result: yes
configure:11866: checking for /usr/bin/clang option to produce PIC
configure:12138: result: -fno-common -DPIC
configure:12150: checking if /usr/bin/clang PIC flag -fno-common -DPIC works
configure:12168: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fno-common -DPIC -DPIC conftest.c >&5
configure:12172: $? = 0
configure:12185: result: yes
configure:12209: checking if /usr/bin/clang static flag -static works
configure:12237: result: no
configure:12252: checking if /usr/bin/clang supports -c -o file.o
configure:12273: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -o out/conftest2.o conftest.c >&5
configure:12277: $? = 0
configure:12299: result: yes
configure:12307: checking if /usr/bin/clang supports -c -o file.o
configure:12354: result: yes
configure:12387: checking whether the /usr/bin/clang linker (/usr/bin/ld) supports shared libraries
configure:13373: result: yes
configure:13612: checking dynamic linker characteristics
configure:14263: result: darwin12.3.0 dyld
configure:14365: checking how to hardcode library paths into programs
configure:14390: result: immediate
configure:14910: checking whether stripping libraries is possible
configure:14924: result: yes
configure:14950: checking if libtool supports shared libraries
configure:14952: result: yes
configure:14955: checking whether to build shared libraries
configure:14976: result: yes
configure:14979: checking whether to build static libraries
configure:14983: result: no
configure:15126: checking for ld used by /usr/bin/clang++
configure:15193: result: /usr/bin/ld
configure:15200: checking if the linker (/usr/bin/ld) is GNU ld
configure:15215: result: no
configure:15270: checking whether the /usr/bin/clang++ linker (/usr/bin/ld) supports shared libraries
configure:16183: result: yes
configure:16211: /usr/bin/clang++ -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.cpp >&5
configure:16214: $? = 0
configure:16396: checking for /usr/bin/clang++ option to produce PIC
configure:16713: result: -fno-common -DPIC
configure:16722: checking if /usr/bin/clang++ PIC flag -fno-common -DPIC works
configure:16740: /usr/bin/clang++ -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -fno-common -DPIC -DPIC conftest.cpp >&5
configure:16744: $? = 0
configure:16757: result: yes
configure:16778: checking if /usr/bin/clang++ static flag -static works
configure:16806: result: no
configure:16818: checking if /usr/bin/clang++ supports -c -o file.o
configure:16839: /usr/bin/clang++ -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -o out/conftest2.o conftest.cpp >&5
configure:16843: $? = 0
configure:16865: result: yes
configure:16870: checking if /usr/bin/clang++ supports -c -o file.o
configure:16917: result: yes
configure:16947: checking whether the /usr/bin/clang++ linker (/usr/bin/ld) supports shared libraries
configure:16973: result: yes
configure:17110: checking dynamic linker characteristics
configure:17709: result: darwin12.3.0 dyld
configure:17760: checking how to hardcode library paths into programs
configure:17785: result: immediate
configure:17926: checking if libtool supports shared libraries
configure:17928: result: yes
configure:17931: checking whether to build shared libraries
configure:17951: result: yes
configure:17954: checking whether to build static libraries
configure:17958: result: no
configure:17972: checking for /usr/local/bin/gfortran option to produce PIC
configure:18244: result:
configure:18309: checking if /usr/local/bin/gfortran static flag works
configure:18337: result: no
configure:18349: checking if /usr/local/bin/gfortran supports -c -o file.o
configure:18370: /usr/local/bin/gfortran -c -Os -w -pipe -mmacosx-version-min=10.8 core2 -msse4 -o out/conftest2.o conftest.f >&5
gfortran: error: core2: No such file or directory
configure:18374: $? = 1
configure:18396: result: no
configure:18401: checking if /usr/local/bin/gfortran supports -c -o file.o
configure:18448: result: no
configure:18478: checking whether the /usr/local/bin/gfortran linker (/usr/bin/ld) supports shared libraries
configure:19451: result: no
configure:19588: checking dynamic linker characteristics
configure:20181: result: darwin12.3.0 dyld
configure:20232: checking how to hardcode library paths into programs
configure:20257: result: immediate
configure:20551: checking for sin in -lm
configure:20576: /usr/bin/clang -o conftest -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib conftest.c -lm >&5
configure:20576: $? = 0
configure:20585: result: yes
configure:20599: checking for library containing dlopen
configure:20630: /usr/bin/clang -o conftest -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib conftest.c -lm >&5
configure:20630: $? = 0
configure:20647: result: none required
configure:20760: checking readline/history.h usability
configure:20760: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:20760: $? = 0
configure:20760: result: yes
configure:20760: checking readline/history.h presence
configure:20760: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c
configure:20760: $? = 0
configure:20760: result: yes
configure:20760: checking for readline/history.h
configure:20760: result: yes
configure:20760: checking readline/readline.h usability
configure:20760: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:20760: $? = 0
configure:20760: result: yes
configure:20760: checking readline/readline.h presence
configure:20760: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c
configure:20760: $? = 0
configure:20760: result: yes
configure:20760: checking for readline/readline.h
configure:20760: result: yes
configure:20774: checking for rl_callback_read_char in -lreadline
configure:20799: /usr/bin/clang -o conftest -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib conftest.c -lreadline >&5
configure:20799: $? = 0
configure:20808: result: yes
configure:20992: checking for history_truncate_file
configure:20992: /usr/bin/clang -o conftest -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib conftest.c -lreadline >&5
configure:20992: $? = 0
configure:20992: result: yes
configure:21007: checking whether rl_completion_matches exists and is declared
configure:21029: /usr/bin/clang -o conftest -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib conftest.c -lreadline >&5
configure:21029: $? = 0
configure:21038: result: yes
configure:21056: checking for ANSI C header files
configure:21160: result: yes
configure:21171: checking for dirent.h that defines DIR
configure:21190: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:21190: $? = 0
configure:21198: result: yes
configure:21211: checking for library containing opendir
configure:21242: /usr/bin/clang -o conftest -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib conftest.c -lm >&5
configure:21242: $? = 0
configure:21259: result: none required
configure:21330: checking for sys/wait.h that is POSIX.1 compatible
configure:21356: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:21356: $? = 0
configure:21363: result: yes
configure:21389: checking arpa/inet.h usability
configure:21389: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking arpa/inet.h presence
configure:21389: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking for arpa/inet.h
configure:21389: result: yes
configure:21389: checking dl.h usability
configure:21389: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
conftest.c:77:10: fatal error: 'dl.h' file not found
#include <dl.h>
^
1 error generated.
configure:21389: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <dl.h>
configure:21389: result: no
configure:21389: checking dl.h presence
configure:21389: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c
conftest.c:44:10: fatal error: 'dl.h' file not found
#include <dl.h>
^
1 error generated.
configure:21389: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| /* end confdefs.h. */
| #include <dl.h>
configure:21389: result: no
configure:21389: checking for dl.h
configure:21389: result: no
configure:21389: checking for dlfcn.h
configure:21389: result: yes
configure:21389: checking elf.h usability
configure:21389: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
conftest.c:78:10: fatal error: 'elf.h' file not found
#include <elf.h>
^
1 error generated.
configure:21389: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <elf.h>
configure:21389: result: no
configure:21389: checking elf.h presence
configure:21389: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c
conftest.c:45:10: fatal error: 'elf.h' file not found
#include <elf.h>
^
1 error generated.
configure:21389: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| /* end confdefs.h. */
| #include <elf.h>
configure:21389: result: no
configure:21389: checking for elf.h
configure:21389: result: no
configure:21389: checking fcntl.h usability
configure:21389: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking fcntl.h presence
configure:21389: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking for fcntl.h
configure:21389: result: yes
configure:21389: checking floatingpoint.h usability
configure:21389: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
conftest.c:79:10: fatal error: 'floatingpoint.h' file not found
#include <floatingpoint.h>
^
1 error generated.
configure:21389: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <floatingpoint.h>
configure:21389: result: no
configure:21389: checking floatingpoint.h presence
configure:21389: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c
conftest.c:46:10: fatal error: 'floatingpoint.h' file not found
#include <floatingpoint.h>
^
1 error generated.
configure:21389: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| /* end confdefs.h. */
| #include <floatingpoint.h>
configure:21389: result: no
configure:21389: checking for floatingpoint.h
configure:21389: result: no
configure:21389: checking fpu_control.h usability
configure:21389: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
conftest.c:79:10: fatal error: 'fpu_control.h' file not found
#include <fpu_control.h>
^
1 error generated.
configure:21389: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <fpu_control.h>
configure:21389: result: no
configure:21389: checking fpu_control.h presence
configure:21389: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c
conftest.c:46:10: fatal error: 'fpu_control.h' file not found
#include <fpu_control.h>
^
1 error generated.
configure:21389: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| /* end confdefs.h. */
| #include <fpu_control.h>
configure:21389: result: no
configure:21389: checking for fpu_control.h
configure:21389: result: no
configure:21389: checking glob.h usability
configure:21389: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking glob.h presence
configure:21389: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking for glob.h
configure:21389: result: yes
configure:21389: checking grp.h usability
configure:21389: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking grp.h presence
configure:21389: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking for grp.h
configure:21389: result: yes
configure:21389: checking netdb.h usability
configure:21389: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking netdb.h presence
configure:21389: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking for netdb.h
configure:21389: result: yes
configure:21389: checking netinet/in.h usability
configure:21389: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking netinet/in.h presence
configure:21389: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking for netinet/in.h
configure:21389: result: yes
configure:21389: checking pwd.h usability
configure:21389: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking pwd.h presence
configure:21389: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking for pwd.h
configure:21389: result: yes
configure:21389: checking for strings.h
configure:21389: result: yes
configure:21389: checking sys/param.h usability
configure:21389: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking sys/param.h presence
configure:21389: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking for sys/param.h
configure:21389: result: yes
configure:21389: checking sys/resource.h usability
configure:21389: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking sys/resource.h presence
configure:21389: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking for sys/resource.h
configure:21389: result: yes
configure:21389: checking sys/select.h usability
configure:21389: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking sys/select.h presence
configure:21389: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking for sys/select.h
configure:21389: result: yes
configure:21389: checking sys/socket.h usability
configure:21389: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking sys/socket.h presence
configure:21389: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking for sys/socket.h
configure:21389: result: yes
configure:21389: checking for sys/stat.h
configure:21389: result: yes
configure:21389: checking sys/time.h usability
configure:21389: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking sys/time.h presence
configure:21389: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking for sys/time.h
configure:21389: result: yes
configure:21389: checking sys/times.h usability
configure:21389: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking sys/times.h presence
configure:21389: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking for sys/times.h
configure:21389: result: yes
configure:21389: checking sys/utsname.h usability
configure:21389: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking sys/utsname.h presence
configure:21389: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking for sys/utsname.h
configure:21389: result: yes
configure:21389: checking for unistd.h
configure:21389: result: yes
configure:21389: checking utime.h usability
configure:21389: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking utime.h presence
configure:21389: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c
configure:21389: $? = 0
configure:21389: result: yes
configure:21389: checking for utime.h
configure:21389: result: yes
configure:21407: checking errno.h usability
configure:21407: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:21407: $? = 0
configure:21407: result: yes
configure:21407: checking errno.h presence
configure:21407: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c
configure:21407: $? = 0
configure:21407: result: yes
configure:21407: checking for errno.h
configure:21407: result: yes
configure:21407: checking for inttypes.h
configure:21407: result: yes
configure:21407: checking limits.h usability
configure:21407: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:21407: $? = 0
configure:21407: result: yes
configure:21407: checking limits.h presence
configure:21407: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c
configure:21407: $? = 0
configure:21407: result: yes
configure:21407: checking for limits.h
configure:21407: result: yes
configure:21407: checking locale.h usability
configure:21407: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:21407: $? = 0
configure:21407: result: yes
configure:21407: checking locale.h presence
configure:21407: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c
configure:21407: $? = 0
configure:21407: result: yes
configure:21407: checking for locale.h
configure:21407: result: yes
configure:21407: checking stdarg.h usability
configure:21407: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:21407: $? = 0
configure:21407: result: yes
configure:21407: checking stdarg.h presence
configure:21407: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c
configure:21407: $? = 0
configure:21407: result: yes
configure:21407: checking for stdarg.h
configure:21407: result: yes
configure:21407: checking stdbool.h usability
configure:21407: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:21407: $? = 0
configure:21407: result: yes
configure:21407: checking stdbool.h presence
configure:21407: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c
configure:21407: $? = 0
configure:21407: result: yes
configure:21407: checking for stdbool.h
configure:21407: result: yes
configure:21407: checking for stdint.h
configure:21407: result: yes
configure:21407: checking for string.h
configure:21407: result: yes
configure:21420: checking whether setjmp.h is POSIX.1 compatible
configure:21438: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:21438: $? = 0
configure:21445: result: yes
configure:21447: checking whether sigsetjmp is declared
configure:21447: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:21447: $? = 0
configure:21447: result: yes
configure:21458: checking whether siglongjmp is declared
configure:21458: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:21458: $? = 0
configure:21458: result: yes
configure:21482: checking for GNU C library with version >= 2
configure:21505: result: no
configure:21516: checking return type of signal handlers
configure:21534: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
conftest.c:79:8: error: indirection requires pointer operand ('void' invalid)
return *(signal (0, 0)) (0) == 1;
^~~~~~~~~~~~~~~~~~~~
1 error generated.
configure:21534: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| /* end confdefs.h. */
| #include <sys/types.h>
| #include <signal.h>
|
| int
| main ()
| {
| return *(signal (0, 0)) (0) == 1;
| ;
| return 0;
| }
configure:21541: result: void
configure:21550: checking for uint64_t
configure:21550: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:21550: $? = 0
configure:21550: result: yes
configure:21564: checking for pid_t
configure:21564: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:21564: $? = 0
configure:21564: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
conftest.c:110:20: error: expected expression
if (sizeof ((pid_t)))
^
1 error generated.
configure:21564: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
| if (sizeof ((pid_t)))
| return 0;
| ;
| return 0;
| }
configure:21564: result: yes
configure:21575: checking for size_t
configure:21575: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:21575: $? = 0
configure:21575: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
conftest.c:110:21: error: expected expression
if (sizeof ((size_t)))
^
1 error generated.
configure:21575: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
| if (sizeof ((size_t)))
| return 0;
| ;
| return 0;
| }
configure:21575: result: yes
configure:21586: checking whether SIZE_MAX is declared
configure:21619: /usr/bin/clang -o conftest -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib conftest.c -lm >&5
configure:21619: $? = 0
configure:21619: ./conftest
configure:21619: $? = 0
configure:21629: result: yes
configure:21637: checking for blkcnt_t
configure:21637: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:21637: $? = 0
configure:21637: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
conftest.c:111:23: error: expected expression
if (sizeof ((blkcnt_t)))
^
1 error generated.
configure:21637: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
| if (sizeof ((blkcnt_t)))
| return 0;
| ;
| return 0;
| }
configure:21637: result: yes
configure:21649: checking for type of socket length
configure:21675: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:21675: $? = 0
configure:21695: result: socklen_t *
configure:21704: checking for stack_t
configure:21704: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:21704: $? = 0
configure:21704: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
conftest.c:81:22: error: expected expression
if (sizeof ((stack_t)))
^
1 error generated.
configure:21704: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| /* end confdefs.h. */
| #include <signal.h>
|
| int
| main ()
| {
| if (sizeof ((stack_t)))
| return 0;
| ;
| return 0;
| }
configure:21704: result: yes
configure:21720: checking for intptr_t
configure:21720: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:21720: $? = 0
configure:21720: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
conftest.c:87:23: error: expected expression
if (sizeof ((intptr_t)))
^
1 error generated.
configure:21720: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| /* end confdefs.h. */
| #ifdef HAVE_INTTYPES_H
| #include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| #include <stdint.h>
| #endif
|
| int
| main ()
| {
| if (sizeof ((intptr_t)))
| return 0;
| ;
| return 0;
| }
configure:21720: result: yes
configure:21735: checking for uintptr_t
configure:21735: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:21735: $? = 0
configure:21735: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
conftest.c:88:24: error: expected expression
if (sizeof ((uintptr_t)))
^
1 error generated.
configure:21735: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| /* end confdefs.h. */
| #ifdef HAVE_INTTYPES_H
| #include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| #include <stdint.h>
| #endif
|
| int
| main ()
| {
| if (sizeof ((uintptr_t)))
| return 0;
| ;
| return 0;
| }
configure:21735: result: yes
configure:21758: checking whether byte ordering is bigendian
configure:21781: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:21781: $? = 0
configure:21799: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
conftest.c:86:2: error: use of undeclared identifier 'not'
not big endian
^
1 error generated.
configure:21799: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| /* end confdefs.h. */
| #include <sys/types.h>
| #include <sys/param.h>
|
| int
| main ()
| {
| #if BYTE_ORDER != BIG_ENDIAN
| not big endian
| #endif
|
| ;
| return 0;
| }
configure:21873: result: no
configure:21887: checking for an ANSI C-conforming const
configure:21953: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:21953: $? = 0
configure:21960: result: yes
configure:21972: checking for /usr/bin/clang option to accept ISO C99
configure:22121: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:22121: $? = 0
configure:22134: result: none needed
configure:22242: checking for /usr/bin/clang option to accept ISO Standard C
configure:22253: result: none needed
configure:22260: checking for inline
configure:22275: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:22275: $? = 0
configure:22282: result: inline
configure:22298: checking size of int
configure:22303: /usr/bin/clang -o conftest -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib conftest.c -lm >&5
configure:22303: $? = 0
configure:22303: ./conftest
configure:22303: $? = 0
configure:22317: result: 4
configure:22339: checking size of long
configure:22344: /usr/bin/clang -o conftest -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib conftest.c -lm >&5
configure:22344: $? = 0
configure:22344: ./conftest
configure:22344: $? = 0
configure:22358: result: 8
configure:22372: checking size of long long
configure:22377: /usr/bin/clang -o conftest -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib conftest.c -lm >&5
configure:22377: $? = 0
configure:22377: ./conftest
configure:22377: $? = 0
configure:22391: result: 8
configure:22405: checking size of double
configure:22410: /usr/bin/clang -o conftest -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib conftest.c -lm >&5
configure:22410: $? = 0
configure:22410: ./conftest
configure:22410: $? = 0
configure:22424: result: 8
configure:22438: checking size of long double
configure:22443: /usr/bin/clang -o conftest -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib conftest.c -lm >&5
configure:22443: $? = 0
configure:22443: ./conftest
configure:22443: $? = 0
configure:22457: result: 16
configure:22471: checking size of size_t
configure:22476: /usr/bin/clang -o conftest -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib conftest.c -lm >&5
configure:22476: $? = 0
configure:22476: ./conftest
configure:22476: $? = 0
configure:22490: result: 8
configure:22502: checking whether we can compute C Make dependencies
configure:22537: result: yes, using /usr/bin/clang -MM
configure:22561: checking whether /usr/bin/clang supports -c -o FILE.lo
configure:22571: /usr/bin/clang -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c conftest.c -o TMP/conftest.lo 1>&5
configure:22574: $? = 0
configure:22577: /usr/bin/clang -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -c conftest.c -o TMP/conftest.lo 1>&5
configure:22580: $? = 0
configure:22588: result: yes
configure:22617: checking for /usr/bin/clang option to support OpenMP
configure:22632: /usr/bin/clang -o conftest -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib conftest.c -lm >&5
conftest.c:89:2: error: unknown type name 'choke'
choke me
^
conftest.c:91:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:22632: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:22650: /usr/bin/clang -o conftest -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -fopenmp -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib conftest.c -lm >&5
conftest.c:89:2: error: unknown type name 'choke'
choke me
^
conftest.c:91:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:22650: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:22650: /usr/bin/clang -o conftest -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -xopenmp -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib conftest.c -lm >&5
clang: error: language not recognized: 'openmp'
configure:22650: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:22650: /usr/bin/clang -o conftest -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -openmp -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib conftest.c -lm >&5
conftest.c:89:2: error: unknown type name 'choke'
choke me
^
conftest.c:91:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:22650: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:22650: /usr/bin/clang -o conftest -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -mp -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib conftest.c -lm >&5
conftest.c:89:2: error: unknown type name 'choke'
choke me
^
conftest.c:91:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:22650: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:22650: /usr/bin/clang -o conftest -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -omp -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib conftest.c -lm >&5
conftest.c:89:2: error: unknown type name 'choke'
choke me
^
conftest.c:91:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:22650: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:22650: /usr/bin/clang -o conftest -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -qsmp=omp -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib conftest.c -lm >&5
conftest.c:89:2: error: unknown type name 'choke'
choke me
^
conftest.c:91:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:22650: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:22650: /usr/bin/clang -o conftest -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -homp -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib conftest.c -lm >&5
conftest.c:89:2: error: unknown type name 'choke'
choke me
^
conftest.c:91:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:22650: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:22650: /usr/bin/clang -o conftest -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -Popenmp -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib conftest.c -lm >&5
conftest.c:89:2: error: unknown type name 'choke'
choke me
^
conftest.c:91:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:22650: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:22650: /usr/bin/clang -o conftest -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 --openmp -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib conftest.c -lm >&5
clang: error: unsupported option '--openmp'
configure:22650: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "2.15.3"
| #define PACKAGE_STRING "R 2.15.3"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "2.15.3"
| #define R_PLATFORM "x86_64-apple-darwin12.3.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.3.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 16
| #define SIZEOF_SIZE_T 8
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:22664: result: unsupported
configure:22695: checking how to get verbose linking output from /usr/local/bin/gfortran
configure:22705: /usr/local/bin/gfortran -c -Os -w -pipe -mmacosx-version-min=10.8 core2 -msse4 conftest.f >&5
gfortran: error: core2: No such file or directory
configure:22705: $? = 1
configure: failed program was:
| program main
|
| end
configure:22800: WARNING: compilation failed
configure:22806: result:
configure:22808: checking for Fortran 77 libraries of /usr/local/bin/gfortran
configure:22831: /usr/local/bin/gfortran -o conftest -Os -w -pipe -mmacosx-version-min=10.8 core2 -msse4 -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib conftest.f
gfortran: error: core2: No such file or directory
configure:23027: result:
configure:23045: checking how to get verbose linking output from /usr/bin/clang
configure:23061: /usr/bin/clang -c -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include conftest.c >&5
configure:23061: $? = 0
configure:23083: /usr/bin/clang -o conftest -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -v -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib conftest.c >&5
Apple LLVM version 4.2 (clang-425.0.27) (based on LLVM 3.2svn)
Target: x86_64-apple-darwin12.3.0
Thread model: posix
"/usr/bin/clang" -cc1 -triple x86_64-apple-macosx10.8.0 -emit-obj -disable-free -disable-llvm-verifier -main-file-name conftest.c -pic-level 2 -mdisable-fp-elim -masm-verbose -munwind-tables -target-cpu corei7-avx -target-linker-version 136 -v -resource-dir /usr/bin/../lib/clang/4.2 -I /usr/local/opt/readline/include -F/usr/local/Frameworks -I /opt/X11/include -F/usr/local/Frameworks -fmodule-cache-path /var/folders/z2/1_f43_212cn4gbyftt8db3p40000gn/T/clang-module-cache -I/usr/local/include -Os -w -fdebug-compilation-dir /private/tmp/r-x1li/R-2.15.3 -ferror-limit 19 -fmessage-length 0 -stack-protector 1 -mstackrealign -fblocks -fobjc-runtime=macosx-10.8.0 -fobjc-dispatch-method=mixed -fobjc-default-synthesize-properties -fdiagnostics-show-option -o /var/folders/z2/1_f43_212cn4gbyftt8db3p40000gn/T/conftest-69d0FG.o -x c conftest.c
clang -cc1 version 4.2 based upon LLVM 3.2svn default target x86_64-apple-darwin12.3.0
ignoring duplicate directory "/usr/local/Frameworks"
ignoring duplicate directory "/usr/local/include"
as it is a non-system directory that duplicates a system directory
#include "..." search starts here:
#include <...> search starts here:
/usr/local/opt/readline/include
/usr/local/Frameworks (framework directory)
/opt/X11/include
/usr/local/include
/usr/bin/../lib/clang/4.2/include
/usr/include
/System/Library/Frameworks (framework directory)
/Library/Frameworks (framework directory)
End of search list.
"/usr/bin/ld" -demangle -dynamic -arch x86_64 -macosx_version_min 10.8.0 -w -o conftest -L/usr/local/opt/readline/lib -L/usr/local/lib -L/opt/X11/lib /var/folders/z2/1_f43_212cn4gbyftt8db3p40000gn/T/conftest-69d0FG.o -lSystem /usr/bin/../lib/clang/4.2/lib/darwin/libclang_rt.osx.a -F/usr/local/Frameworks -F/usr/local/Frameworks
configure:23129: result: -v
configure:23131: checking for C libraries of /usr/bin/clang
configure:23158: /usr/bin/clang -o conftest -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -v -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib conftest.c >&5
Apple LLVM version 4.2 (clang-425.0.27) (based on LLVM 3.2svn)
Target: x86_64-apple-darwin12.3.0
Thread model: posix
"/usr/bin/clang" -cc1 -triple x86_64-apple-macosx10.8.0 -emit-obj -disable-free -disable-llvm-verifier -main-file-name conftest.c -pic-level 2 -mdisable-fp-elim -masm-verbose -munwind-tables -target-cpu corei7-avx -target-linker-version 136 -v -resource-dir /usr/bin/../lib/clang/4.2 -I /usr/local/opt/readline/include -F/usr/local/Frameworks -I /opt/X11/include -F/usr/local/Frameworks -fmodule-cache-path /var/folders/z2/1_f43_212cn4gbyftt8db3p40000gn/T/clang-module-cache -I/usr/local/include -Os -w -fdebug-compilation-dir /private/tmp/r-x1li/R-2.15.3 -ferror-limit 19 -fmessage-length 0 -stack-protector 1 -mstackrealign -fblocks -fobjc-runtime=macosx-10.8.0 -fobjc-dispatch-method=mixed -fobjc-default-synthesize-properties -fdiagnostics-show-option -o /var/folders/z2/1_f43_212cn4gbyftt8db3p40000gn/T/conftest-wVpc6H.o -x c conftest.c
clang -cc1 version 4.2 based upon LLVM 3.2svn default target x86_64-apple-darwin12.3.0
ignoring duplicate directory "/usr/local/Frameworks"
ignoring duplicate directory "/usr/local/include"
as it is a non-system directory that duplicates a system directory
#include "..." search starts here:
#include <...> search starts here:
/usr/local/opt/readline/include
/usr/local/Frameworks (framework directory)
/opt/X11/include
/usr/local/include
/usr/bin/../lib/clang/4.2/include
/usr/include
/System/Library/Frameworks (framework directory)
/Library/Frameworks (framework directory)
End of search list.
"/usr/bin/ld" -demangle -dynamic -arch x86_64 -macosx_version_min 10.8.0 -w -o conftest -L/usr/local/opt/readline/lib -L/usr/local/lib -L/opt/X11/lib /var/folders/z2/1_f43_212cn4gbyftt8db3p40000gn/T/conftest-wVpc6H.o -lSystem /usr/bin/../lib/clang/4.2/lib/darwin/libclang_rt.osx.a -F/usr/local/Frameworks -F/usr/local/Frameworks
configure:23309: result: -L/usr/local/opt/readline/lib -L/usr/local/lib -L/opt/X11/lib -lSystem /usr/bin/../lib/clang/4.2/lib/darwin/libclang_rt.osx.a
configure:23444: checking for dummy main to link with Fortran 77 libraries
configure:23478: /usr/bin/clang -o conftest -Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib conftest.c -lm >&5
configure:23478: $? = 0
configure:23523: result: none
configure:23556: checking for Fortran 77 name-mangling scheme
configure:23569: /usr/local/bin/gfortran -c -Os -w -pipe -mmacosx-version-min=10.8 core2 -msse4 conftest.f >&5
gfortran: error: core2: No such file or directory
configure:23569: $? = 1
configure: failed program was:
| subroutine foobar()
| return
| end
| subroutine foo_bar()
| return
| end
configure:23702: error: in `/private/tmp/r-x1li/R-2.15.3':
configure:23704: error: cannot compile a simple Fortran program
See `config.log' for more details
## ---------------- ##
## Cache variables. ##
## ---------------- ##
ac_cv_build=x86_64-apple-darwin12.3.0
ac_cv_c_bigendian=no
ac_cv_c_compiler_gnu=yes
ac_cv_c_const=yes
ac_cv_c_uint64_t=yes
ac_cv_cxx_compiler_gnu=yes
ac_cv_env_BLAS_LIBS_set=
ac_cv_env_BLAS_LIBS_value=
ac_cv_env_CCC_set=
ac_cv_env_CCC_value=
ac_cv_env_CC_set=set
ac_cv_env_CC_value=/usr/bin/clang
ac_cv_env_CFLAGS_set=set
ac_cv_env_CFLAGS_value='-Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8'
ac_cv_env_CPICFLAGS_set=
ac_cv_env_CPICFLAGS_value=
ac_cv_env_CPPFLAGS_set=set
ac_cv_env_CPPFLAGS_value='-I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include'
ac_cv_env_CPP_set=
ac_cv_env_CPP_value=
ac_cv_env_CXXCPP_set=
ac_cv_env_CXXCPP_value=
ac_cv_env_CXXFLAGS_set=set
ac_cv_env_CXXFLAGS_value='-Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8'
ac_cv_env_CXXPICFLAGS_set=
ac_cv_env_CXXPICFLAGS_value=
ac_cv_env_CXX_set=set
ac_cv_env_CXX_value=/usr/bin/clang++
ac_cv_env_DEFS_set=
ac_cv_env_DEFS_value=
ac_cv_env_DYLIB_LDFLAGS_set=
ac_cv_env_DYLIB_LDFLAGS_value=
ac_cv_env_DYLIB_LD_set=
ac_cv_env_DYLIB_LD_value=
ac_cv_env_F77_set=set
ac_cv_env_F77_value=/usr/local/bin/gfortran
ac_cv_env_FCFLAGS_set=set
ac_cv_env_FCFLAGS_value='-Os -w -pipe -mmacosx-version-min=10.8 core2 -msse4'
ac_cv_env_FCPICFLAGS_set=
ac_cv_env_FCPICFLAGS_value=
ac_cv_env_FC_set=set
ac_cv_env_FC_value=/usr/local/bin/gfortran
ac_cv_env_FFLAGS_set=set
ac_cv_env_FFLAGS_value='-Os -w -pipe -mmacosx-version-min=10.8 core2 -msse4'
ac_cv_env_FPICFLAGS_set=
ac_cv_env_FPICFLAGS_value=
ac_cv_env_JAVA_HOME_set=
ac_cv_env_JAVA_HOME_value=
ac_cv_env_LAPACK_LIBS_set=
ac_cv_env_LAPACK_LIBS_value=
ac_cv_env_LDFLAGS_set=set
ac_cv_env_LDFLAGS_value='-L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib'
ac_cv_env_LIBS_set=
ac_cv_env_LIBS_value=
ac_cv_env_LIBnn_set=
ac_cv_env_LIBnn_value=
ac_cv_env_MAIN_CFLAGS_set=
ac_cv_env_MAIN_CFLAGS_value=
ac_cv_env_MAIN_FFLAGS_set=
ac_cv_env_MAIN_FFLAGS_value=
ac_cv_env_MAIN_LDFLAGS_set=
ac_cv_env_MAIN_LDFLAGS_value=
ac_cv_env_MAIN_LD_set=
ac_cv_env_MAIN_LD_value=
ac_cv_env_MAKE_set=
ac_cv_env_MAKE_value=
ac_cv_env_OBJCFLAGS_set=set
ac_cv_env_OBJCFLAGS_value='-Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8'
ac_cv_env_OBJC_set=set
ac_cv_env_OBJC_value=/usr/bin/clang
ac_cv_env_R_BATCHSAVE_set=
ac_cv_env_R_BATCHSAVE_value=
ac_cv_env_R_BROWSER_set=
ac_cv_env_R_BROWSER_value=
ac_cv_env_R_PAPERSIZE_set=
ac_cv_env_R_PAPERSIZE_value=
ac_cv_env_R_PDFVIEWER_set=
ac_cv_env_R_PDFVIEWER_value=
ac_cv_env_R_PRINTCMD_set=
ac_cv_env_R_PRINTCMD_value=
ac_cv_env_R_SHELL_set=
ac_cv_env_R_SHELL_value=
ac_cv_env_SAFE_FFLAGS_set=
ac_cv_env_SAFE_FFLAGS_value=
ac_cv_env_SHLIB_CFLAGS_set=
ac_cv_env_SHLIB_CFLAGS_value=
ac_cv_env_SHLIB_CXXLDFLAGS_set=
ac_cv_env_SHLIB_CXXLDFLAGS_value=
ac_cv_env_SHLIB_CXXLD_set=
ac_cv_env_SHLIB_CXXLD_value=
ac_cv_env_SHLIB_FCLDFLAGS_set=
ac_cv_env_SHLIB_FCLDFLAGS_value=
ac_cv_env_SHLIB_FCLD_set=
ac_cv_env_SHLIB_FCLD_value=
ac_cv_env_SHLIB_FFLAGS_set=
ac_cv_env_SHLIB_FFLAGS_value=
ac_cv_env_SHLIB_LDFLAGS_set=
ac_cv_env_SHLIB_LDFLAGS_value=
ac_cv_env_SHLIB_LD_set=
ac_cv_env_SHLIB_LD_value=
ac_cv_env_TAR_set=
ac_cv_env_TAR_value=
ac_cv_env_TCLTK_CPPFLAGS_set=
ac_cv_env_TCLTK_CPPFLAGS_value=
ac_cv_env_TCLTK_LIBS_set=
ac_cv_env_TCLTK_LIBS_value=
ac_cv_env_XMKMF_set=
ac_cv_env_XMKMF_value=
ac_cv_env_YACC_set=
ac_cv_env_YACC_value=
ac_cv_env_YFLAGS_set=
ac_cv_env_YFLAGS_value=
ac_cv_env_build_alias_set=
ac_cv_env_build_alias_value=
ac_cv_env_host_alias_set=
ac_cv_env_host_alias_value=
ac_cv_env_r_arch_set=
ac_cv_env_r_arch_value=
ac_cv_env_target_alias_set=
ac_cv_env_target_alias_value=
ac_cv_f77_compiler_gnu=no
ac_cv_f77_dummy_main=none
ac_cv_f77_libs=
ac_cv_fortran_dummy_main=none
ac_cv_func_history_truncate_file=yes
ac_cv_have_decl_rl_completion_matches=yes
ac_cv_have_decl_siglongjmp=yes
ac_cv_have_decl_sigsetjmp=yes
ac_cv_header_arpa_inet_h=yes
ac_cv_header_dirent_dirent_h=yes
ac_cv_header_dl_h=no
ac_cv_header_dlfcn_h=yes
ac_cv_header_elf_h=no
ac_cv_header_errno_h=yes
ac_cv_header_fcntl_h=yes
ac_cv_header_floatingpoint_h=no
ac_cv_header_fpu_control_h=no
ac_cv_header_glob_h=yes
ac_cv_header_grp_h=yes
ac_cv_header_inttypes_h=yes
ac_cv_header_limits_h=yes
ac_cv_header_locale_h=yes
ac_cv_header_memory_h=yes
ac_cv_header_minix_config_h=no
ac_cv_header_netdb_h=yes
ac_cv_header_netinet_in_h=yes
ac_cv_header_pwd_h=yes
ac_cv_header_readline_history_h=yes
ac_cv_header_readline_readline_h=yes
ac_cv_header_stdarg_h=yes
ac_cv_header_stdbool_h=yes
ac_cv_header_stdc=yes
ac_cv_header_stdint_h=yes
ac_cv_header_stdlib_h=yes
ac_cv_header_string_h=yes
ac_cv_header_strings_h=yes
ac_cv_header_sys_param_h=yes
ac_cv_header_sys_resource_h=yes
ac_cv_header_sys_select_h=yes
ac_cv_header_sys_socket_h=yes
ac_cv_header_sys_stat_h=yes
ac_cv_header_sys_time_h=yes
ac_cv_header_sys_times_h=yes
ac_cv_header_sys_types_h=yes
ac_cv_header_sys_utsname_h=yes
ac_cv_header_sys_wait_h=yes
ac_cv_header_unistd_h=yes
ac_cv_header_utime_h=yes
ac_cv_host=x86_64-apple-darwin12.3.0
ac_cv_lib_m_sin=yes
ac_cv_lib_readline_rl_callback_read_char=yes
ac_cv_objc_compiler_gnu=yes
ac_cv_objext=o
ac_cv_path_EGREP='/usr/bin/grep -E'
ac_cv_path_FGREP='/usr/bin/grep -F'
ac_cv_path_GETWD=/bin/pwd
ac_cv_path_GREP=/usr/bin/grep
ac_cv_path_INSTALL_INFO=/usr/bin/install-info
ac_cv_path_KPSEWHICH=/usr/texbin/kpsewhich
ac_cv_path_MAKEINDEX=/usr/texbin/makeindex
ac_cv_path_MAKEINFO=/usr/bin/makeinfo
ac_cv_path_NOTANGLE=false
ac_cv_path_PAGER=/usr/bin/less
ac_cv_path_PDFLATEX=/usr/texbin/pdflatex
ac_cv_path_PDFTEX=/usr/texbin/pdftex
ac_cv_path_PKGCONF=/usr/local/bin/pkg-config
ac_cv_path_R_BROWSER=/usr/bin/open
ac_cv_path_R_BZIPCMD=/usr/bin/bzip2
ac_cv_path_R_GZIPCMD=/usr/bin/gzip
ac_cv_path_R_PDFVIEWER=/usr/bin/open
ac_cv_path_R_UNZIPCMD=/usr/bin/unzip
ac_cv_path_R_ZIPCMD=/usr/bin/zip
ac_cv_path_SED=/usr/bin/sed
ac_cv_path_TAR=/usr/bin/gnutar
ac_cv_path_TEX=/usr/texbin/tex
ac_cv_path_TEXI2DVI=/usr/bin/texi2dvi
ac_cv_path_WHICH=/usr/bin/which
ac_cv_path_install='/usr/local/bin/ginstall -c'
ac_cv_prog_AR=ar
ac_cv_prog_AWK=gawk
ac_cv_prog_CPP='/usr/bin/clang -E'
ac_cv_prog_CXXCPP='/usr/bin/clang++ -E'
ac_cv_prog_YACC='bison -y'
ac_cv_prog_ac_ct_CC=/usr/bin/clang
ac_cv_prog_ac_ct_DSYMUTIL=dsymutil
ac_cv_prog_ac_ct_LIPO=lipo
ac_cv_prog_ac_ct_NMEDIT=nmedit
ac_cv_prog_ac_ct_OTOOL=otool
ac_cv_prog_ac_ct_RANLIB=ranlib
ac_cv_prog_ac_ct_STRIP=strip
ac_cv_prog_c_openmp=unsupported
ac_cv_prog_cc_c89=
ac_cv_prog_cc_c99=
ac_cv_prog_cc_g=yes
ac_cv_prog_cc_stdc=
ac_cv_prog_cxx_g=yes
ac_cv_prog_f77_g=yes
ac_cv_prog_gcc_traditional=no
ac_cv_prog_objc_g=yes
ac_cv_safe_to_define___extensions__=yes
ac_cv_search_dlopen='none required'
ac_cv_search_opendir='none required'
ac_cv_sizeof_double=8
ac_cv_sizeof_int=4
ac_cv_sizeof_long=8
ac_cv_sizeof_long_double=16
ac_cv_sizeof_long_long=8
ac_cv_sizeof_size_t=8
ac_cv_type_blkcnt_t=yes
ac_cv_type_intptr_t=yes
ac_cv_type_pid_t=yes
ac_cv_type_signal=void
ac_cv_type_size_t=yes
ac_cv_type_stack_t=yes
ac_cv_type_uintptr_t=yes
lt_cv_apple_cc_single_mod=yes
lt_cv_deplibs_check_method=pass_all
lt_cv_file_magic_cmd='$MAGIC_CMD'
lt_cv_file_magic_test_file=
lt_cv_ld_exported_symbols_list=yes
lt_cv_ld_reload_flag=-r
lt_cv_nm_interface='BSD nm'
lt_cv_objdir=.libs
lt_cv_path_LD=/usr/bin/ld
lt_cv_path_LDCXX=/usr/bin/ld
lt_cv_path_NM=/usr/bin/nm
lt_cv_prog_compiler_c_o=yes
lt_cv_prog_compiler_c_o_CXX=yes
lt_cv_prog_compiler_c_o_F77=no
lt_cv_prog_compiler_pic_works=yes
lt_cv_prog_compiler_pic_works_CXX=yes
lt_cv_prog_compiler_rtti_exceptions=yes
lt_cv_prog_compiler_static_works=no
lt_cv_prog_compiler_static_works_CXX=no
lt_cv_prog_compiler_static_works_F77=no
lt_cv_prog_gnu_ld=no
lt_cv_prog_gnu_ldcxx=no
lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[ ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*_\([_A-Za-z][_A-Za-z0-9]*\)$/\1 _\2 \2/p'\'''
lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \([^ ]*\) $/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[BCDEGRST]* \([^ ]*\) \([^ ]*\)$/ {"\2", (void *) \&\2},/p'\'''
lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='sed -n -e '\''s/^: \([^ ]*\) $/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[BCDEGRST]* \([^ ]*\) \(lib[^ ]*\)$/ {"\2", (void *) \&\2},/p'\'' -e '\''s/^[BCDEGRST]* \([^ ]*\) \([^ ]*\)$/ {"lib\2", (void *) \&\2},/p'\'''
lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^T .* \(.*\)$/extern int \1();/p'\'' -e '\''s/^[BCDEGRST]* .* \(.*\)$/extern char \1;/p'\'''
lt_cv_sys_max_cmd_len=196608
r_cv_OBJCXX=/usr/bin/clang++
r_cv_c_inline=inline
r_cv_c_libs=' -L/usr/local/opt/readline/lib -L/usr/local/lib -L/opt/X11/lib -lSystem /usr/bin/../lib/clang/4.2/lib/darwin/libclang_rt.osx.a'
r_cv_header_glibc2=no
r_cv_header_setjmp_posix=yes
r_cv_prog_c_v=-v
r_cv_prog_cc_c_o_lo=yes
r_cv_prog_cc_m='/usr/bin/clang -MM'
r_cv_prog_cc_vis=yes
r_cv_prog_f77_vis=no
r_cv_prog_makeinfo_v4=yes
r_cv_size_max=yes
r_cv_type_socklen=socklen_t
r_cv_visibility_attribute=no
## ----------------- ##
## Output variables. ##
## ----------------- ##
ACLOCAL='aclocal'
ALLOCA=''
AR='ar'
ARFLAGS='rc'
AUTOCONF='autoconf'
AUTOHEADER='autoheader'
AUTOMAKE='automake'
AWK='gawk'
BITMAP_LIBS=''
BLAS_LIBS0=''
BLAS_LIBS=''
BLAS_SHLIB_FALSE=''
BLAS_SHLIB_TRUE=''
BUILDDIR_IS_SRCDIR='yes'
BUILD_AQUA_FALSE=''
BUILD_AQUA_TRUE=''
BUILD_BZLIB_FALSE=''
BUILD_BZLIB_TRUE=''
BUILD_CC=''
BUILD_CYGWIN_FALSE=''
BUILD_CYGWIN_TRUE=''
BUILD_DEVCAIRO_FALSE=''
BUILD_DEVCAIRO_TRUE=''
BUILD_HTML_FALSE=''
BUILD_HTML_TRUE='#'
BUILD_INCLUDED_LIBINTL=''
BUILD_LIBINTL_FALSE=''
BUILD_LIBINTL_TRUE=''
BUILD_LTO_FALSE=''
BUILD_LTO_TRUE='#'
BUILD_PCRE_FALSE=''
BUILD_PCRE_TRUE=''
BUILD_R=''
BUILD_X11_FALSE=''
BUILD_X11_TRUE=''
BUILD_XDR_FALSE=''
BUILD_XDR_TRUE=''
BUILD_XZ_FALSE=''
BUILD_XZ_TRUE=''
BUILD_ZLIB_FALSE=''
BUILD_ZLIB_TRUE=''
BYTE_COMPILE_PACKAGES_FALSE='#'
BYTE_COMPILE_PACKAGES_TRUE=''
CAIROX11_CPPFLAGS=''
CAIROX11_LIBS=''
CAIRO_CPPFLAGS=''
CAIRO_LIBS=''
CATOBJEXT=''
CC='/usr/bin/clang'
CFLAGS='-Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8'
CFLAG_VISIBILITY=''
COMPILE_FORTRAN_DOUBLE_COMPLEX_FALSE=''
COMPILE_FORTRAN_DOUBLE_COMPLEX_TRUE=''
CPICFLAGS=''
CPP='/usr/bin/clang -E'
CPPFLAGS='-I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include'
CROSS_COMPILING_FALSE=''
CROSS_COMPILING_TRUE='#'
CXX='/usr/bin/clang++'
CXXCPP='/usr/bin/clang++ -E'
CXXFLAGS='-Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8'
CXXPICFLAGS=''
C_VISIBILITY=''
DATADIRNAME=''
DEFS=''
DSYMUTIL='dsymutil'
DUMPBIN=''
DYLIB_EXT=''
DYLIB_LD=''
DYLIB_LDFLAGS=''
DYLIB_UNDEFINED_ALLOWED_FALSE=''
DYLIB_UNDEFINED_ALLOWED_TRUE=''
ECHO_C='\c'
ECHO_N=''
ECHO_T=''
EGREP='/usr/bin/grep -E'
EXEEXT=''
F77='/usr/local/bin/gfortran'
F77_VISIBILITY=''
FC='/usr/local/bin/gfortran'
FCFLAGS='-Os -w -pipe -mmacosx-version-min=10.8 core2 -msse4'
FCFLAGS_f90=''
FCFLAGS_f95=''
FCLIBS=''
FCPICFLAGS=''
FFLAGS='-Os -w -pipe -mmacosx-version-min=10.8 core2 -msse4'
FGREP='/usr/bin/grep -F'
FLIBS=''
FLIBS_IN_SO=''
FOUNDATION_CPPFLAGS=''
FOUNDATION_LIBS=''
FPICFLAGS=''
FW_VERSION='2.15'
GENCAT=''
GETWD='/bin/pwd'
GLIBC21=''
GLIBC2=''
GMSGFMT=''
GMSGFMT_015=''
GREP='/usr/bin/grep'
HAVE_ASPRINTF=''
HAVE_FORTRAN_DOUBLE_COMPLEX=''
HAVE_POSIX_PRINTF=''
HAVE_SNPRINTF=''
HAVE_VISIBILITY=''
HAVE_WPRINTF=''
INSTALL_DATA='${INSTALL} -m 644'
INSTALL_INFO='/usr/bin/install-info'
INSTALL_PROGRAM='${INSTALL}'
INSTALL_SCRIPT='${INSTALL}'
INSTOBJEXT=''
INTLBISON=''
INTLLIBS=''
INTLOBJS=''
INTL_LIBTOOL_SUFFIX_PREFIX=''
INTL_MACOSX_LIBS=''
JAR=''
JAVA=''
JAVAC=''
JAVAH=''
JAVA_CPPFLAGS0=''
JAVA_HOME=''
JAVA_LD_LIBRARY_PATH=''
JAVA_LIBS0=''
KPSEWHICH='/usr/texbin/kpsewhich'
LAPACK_LDFLAGS=''
LAPACK_LIBS=''
LD='/usr/bin/ld'
LDFLAGS='-L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib'
LIBICONV=''
LIBINTL=''
LIBM=''
LIBMULTITHREAD=''
LIBOBJS=''
LIBPTH=''
LIBR='-L$(R_HOME)/lib$(R_ARCH) -lR'
LIBR_LDFLAGS=''
LIBS='-lm '
LIBTHREAD=''
LIBTOOL='$(SHELL) $(top_builddir)/libtool'
LIBTOOL_DEPS='tools/ltmain.sh'
LIBnn='lib'
LIPO='lipo'
LN_S='ln -s'
LTLIBICONV=''
LTLIBINTL=''
LTLIBMULTITHREAD=''
LTLIBOBJS=''
LTLIBPTH=''
LTLIBTHREAD=''
LTO=''
LTOALL=''
MAINTAINER_MODE_FALSE=''
MAINTAINER_MODE_TRUE='#'
MAIN_CFLAGS=''
MAIN_FFLAGS=''
MAIN_LD=''
MAIN_LDFLAGS=''
MAJ_MIN_VERSION='2.15'
MAKE='make'
MAKEINDEX='/usr/texbin/makeindex'
MAKEINFO='/usr/bin/makeinfo'
MKDIR_P=''
MSGFMT=''
MSGFMT_015=''
MSGMERGE=''
NM='/usr/bin/nm'
NMEDIT='nmedit'
NOTANGLE='false'
OBJC='/usr/bin/clang'
OBJCFLAGS='-Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8'
OBJCXX='/usr/bin/clang++'
OBJCXXFLAGS='-Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8'
OBJC_LIBS=''
OBJDUMP='false'
OBJEXT='o'
OPENMP_CFLAGS=''
OPENMP_CXXFLAGS=''
OPENMP_FCFLAGS=''
OPENMP_FFLAGS=''
OSF_SH_BUG=''
OTOOL64=':'
OTOOL='otool'
PACKAGE='R'
PACKAGE_BUGREPORT='http://bugs.r-project.org'
PACKAGE_NAME='R'
PACKAGE_STRING='R 2.15.3'
PACKAGE_TARNAME='R'
PACKAGE_URL='http://www.r-project.org'
PACKAGE_VERSION='2.15.3'
PAGER='/usr/bin/less'
PAPERCONF=''
PATH_SEPARATOR=':'
PDFLATEX='/usr/texbin/pdflatex'
PDFTEX='/usr/texbin/pdftex'
PKGCONF='/usr/local/bin/pkg-config'
POSUB=''
PRI_MACROS_BROKEN=''
RANLIB='ranlib'
RBLAS_LDFLAGS=''
READLINE_LIBS='-lreadline '
RLAPACK_LDFLAGS=''
RMATH_HAVE_EXPM1=''
RMATH_HAVE_HYPOT=''
RMATH_HAVE_LOG1P=''
RMATH_HAVE_WORKING_LOG1P=''
R_ARCH=''
R_BATCHSAVE=''
R_BROWSER='/usr/bin/open'
R_BZIPCMD='/usr/bin/bzip2'
R_CONFIG_ARGS=' '\''--prefix=/usr/local/Cellar/r/2.15.3'\'' '\''--with-aqua'\'' '\''--enable-R-framework'\'' '\''--with-lapack'\'' '\''CC=/usr/bin/clang'\'' '\''CFLAGS=-Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8'\'' '\''LDFLAGS=-L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib'\'' '\''CPPFLAGS=-I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include'\'' '\''F77=/usr/local/bin/gfortran'\'' '\''FFLAGS=-Os -w -pipe -mmacosx-version-min=10.8 core2 -msse4'\'' '\''CXX=/usr/bin/clang++'\'' '\''CXXFLAGS=-Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8'\'' '\''OBJC=/usr/bin/clang'\'' '\''OBJCFLAGS=-Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8'\'' '\''FC=/usr/local/bin/gfortran'\'' '\''FCFLAGS=-Os -w -pipe -mmacosx-version-min=10.8 core2 -msse4'\'''
R_DEFS=''
R_GZIPCMD='/usr/bin/gzip'
R_JAVA_LD_LIBRARY_PATH=''
R_LD_LIBRARY_PATH=''
R_OPENMP_CFLAGS=''
R_OPENMP_FFLAGS=''
R_OS='darwin12.3.0'
R_OSTYPE='unix'
R_PAPERSIZE=''
R_PDFVIEWER='/usr/bin/open'
R_PLATFORM='x86_64-apple-darwin12.3.0'
R_PRINTCMD=''
R_PROFILING=''
R_RD4PDF='times,inconsolata,hyper'
R_SHELL=''
R_SYSTEM_ABI=''
R_UNZIPCMD='/usr/bin/unzip'
R_XTRA_CFLAGS=''
R_XTRA_CPPFLAGS2='-I$(R_INCLUDE_DIR)'
R_XTRA_CPPFLAGS=''
R_XTRA_CXXFLAGS=''
R_XTRA_FFLAGS=''
R_XTRA_LIBS=''
R_ZIPCMD='/usr/bin/zip'
SAFE_FFLAGS=''
SED='/usr/bin/sed'
SET_MAKE=''
SHELL='/bin/sh'
SHLIB_CFLAGS=''
SHLIB_CXXFLAGS=''
SHLIB_CXXLD=''
SHLIB_CXXLDFLAGS=''
SHLIB_EXT=''
SHLIB_FCLD=''
SHLIB_FCLDFLAGS=''
SHLIB_FFLAGS=''
SHLIB_LD=''
SHLIB_LDFLAGS=''
SHLIB_LIBADD=''
SHLIB_OPENMP_CFLAGS=''
SHLIB_OPENMP_CXXFLAGS=''
SHLIB_OPENMP_FCFLAGS=''
SHLIB_OPENMP_FFLAGS=''
STRIP='strip'
TAR='/usr/bin/gnutar'
TCLTK_CPPFLAGS=''
TCLTK_LIBS=''
TCL_CONFIG=''
TEX='/usr/texbin/tex'
TEXI2DVI='/usr/bin/texi2dvi'
TEXI2DVICMD='/usr/bin/texi2dvi'
TIRPC_CPPFLAGS=''
TK_CONFIG=''
USE_EXPORTFILES_FALSE=''
USE_EXPORTFILES_TRUE=''
USE_EXTERNAL_BLAS_FALSE=''
USE_EXTERNAL_BLAS_TRUE=''
USE_EXTERNAL_LAPACK_FALSE=''
USE_EXTERNAL_LAPACK_TRUE=''
USE_ICU=''
USE_ICU_APPLE=''
USE_INCLUDED_LIBINTL=''
USE_MMAP_ZLIB_FALSE=''
USE_MMAP_ZLIB_TRUE=''
USE_NLS=''
USE_NLS_FALSE=''
USE_NLS_TRUE=''
USE_RECOMMENDED_PACKAGES_FALSE=''
USE_RECOMMENDED_PACKAGES_TRUE=''
USE_VECLIB_G95FIX_FALSE=''
USE_VECLIB_G95FIX_TRUE=''
VERSION='2.15.3'
WANT_R_FRAMEWORK_FALSE='#'
WANT_R_FRAMEWORK_TRUE=''
WANT_R_SHLIB_FALSE='#'
WANT_R_SHLIB_TRUE=''
WANT_R_STATIC_FALSE=''
WANT_R_STATIC_TRUE='#'
WHICH='/usr/bin/which'
WOE32DLL=''
XGETTEXT=''
XGETTEXT_015=''
XMKMF=''
XTRA_INTL_CPPFLAGS=''
X_CFLAGS=''
X_EXTRA_LIBS=''
X_LIBS=''
X_PRE_LIBS=''
YACC='bison -y'
YFLAGS=''
ac_ct_CC='/usr/bin/clang'
ac_ct_CXX=''
ac_ct_DUMPBIN=''
ac_ct_F77=''
ac_ct_FC=''
ac_ct_OBJC=''
bindir='${exec_prefix}/bin'
build='x86_64-apple-darwin12.3.0'
build_alias=''
build_cpu='x86_64'
build_os='darwin12.3.0'
build_vendor='apple'
config_opts=' '\''--prefix=/usr/local/Cellar/r/2.15.3'\'' '\''--with-aqua'\'' '\''--enable-R-framework'\'' '\''--with-lapack'\'' '\''CC=/usr/bin/clang'\'' '\''CFLAGS=-Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8'\'' '\''LDFLAGS=-L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -L/opt/X11/lib'\'' '\''CPPFLAGS=-I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include'\'' '\''F77=/usr/local/bin/gfortran'\'' '\''FFLAGS=-Os -w -pipe -mmacosx-version-min=10.8 core2 -msse4'\'' '\''CXX=/usr/bin/clang++'\'' '\''CXXFLAGS=-Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8'\'' '\''OBJC=/usr/bin/clang'\'' '\''OBJCFLAGS=-Os -w -pipe -march=native -Qunused-arguments -mmacosx-version-min=10.8'\'' '\''FC=/usr/local/bin/gfortran'\'' '\''FCFLAGS=-Os -w -pipe -mmacosx-version-min=10.8 core2 -msse4'\'''
datadir='${datarootdir}'
datarootdir='${prefix}/share'
docdir='${datarootdir}/doc/${PACKAGE_TARNAME}'
dvidir='${docdir}'
exec_prefix='NONE'
host='x86_64-apple-darwin12.3.0'
host_alias=''
host_cpu='x86_64'
host_os='darwin12.3.0'
host_vendor='apple'
htmldir='${docdir}'
includedir='${prefix}/include'
infodir='${datarootdir}/info'
libdir='${exec_prefix}/${LIBnn}'
libexecdir='${exec_prefix}/libexec'
localedir='${datarootdir}/locale'
localstatedir='${prefix}/var'
lt_ECHO='/bin/echo'
mandir='${datarootdir}/man'
mkdir_p=''
oldincludedir='/usr/include'
pdfdir='${docdir}'
prefix='/usr/local/Cellar/r/2.15.3'
program_transform_name='s,x,x,'
psdir='${docdir}'
r_arch=''
rdocdir='${rhome}/doc'
rincludedir='${rhome}/include'
rsharedir='${rhome}/share'
sbindir='${exec_prefix}/sbin'
sharedstatedir='${prefix}/com'
shlibpath_var='DYLD_LIBRARY_PATH'
striplib='strip -x'
stripstaticlib='strip -S'
sysconfdir='${prefix}/etc'
target_alias=''
use_aqua=''
use_tcltk=''
## ------------------- ##
## File substitutions. ##
## ------------------- ##
r_cc_lo_rules_frag='Makefrag.cc_lo'
r_cc_rules_frag='Makefrag.cc'
r_cxx_rules_frag=''
r_objc_rules_frag=''
## ----------- ##
## confdefs.h. ##
## ----------- ##
/* confdefs.h */
#define PACKAGE_NAME "R"
#define PACKAGE_TARNAME "R"
#define PACKAGE_VERSION "2.15.3"
#define PACKAGE_STRING "R 2.15.3"
#define PACKAGE_BUGREPORT "http://bugs.r-project.org"
#define PACKAGE_URL "http://www.r-project.org"
#define PACKAGE "R"
#define VERSION "2.15.3"
#define R_PLATFORM "x86_64-apple-darwin12.3.0"
#define R_CPU "x86_64"
#define R_VENDOR "apple"
#define R_OS "darwin12.3.0"
#define Unix 1
#define R_ARCH ""
#define STDC_HEADERS 1
#define HAVE_SYS_TYPES_H 1
#define HAVE_SYS_STAT_H 1
#define HAVE_STDLIB_H 1
#define HAVE_STRING_H 1
#define HAVE_MEMORY_H 1
#define HAVE_STRINGS_H 1
#define HAVE_INTTYPES_H 1
#define HAVE_STDINT_H 1
#define HAVE_UNISTD_H 1
#define __EXTENSIONS__ 1
#define _ALL_SOURCE 1
#define _GNU_SOURCE 1
#define _POSIX_PTHREAD_SEMANTICS 1
#define _TANDEM_SOURCE 1
#define HAVE_DLFCN_H 1
#define LT_OBJDIR ".libs/"
#define HAVE_LIBM 1
#define HAVE_READLINE_HISTORY_H 1
#define HAVE_READLINE_READLINE_H 1
#define HAVE_LIBREADLINE 1
#define HAVE_HISTORY_TRUNCATE_FILE 1
#define HAVE_RL_COMPLETION_MATCHES 1
#define STDC_HEADERS 1
#define HAVE_DIRENT_H 1
#define HAVE_SYS_WAIT_H 1
#define HAVE_ARPA_INET_H 1
#define HAVE_DLFCN_H 1
#define HAVE_FCNTL_H 1
#define HAVE_GLOB_H 1
#define HAVE_GRP_H 1
#define HAVE_NETDB_H 1
#define HAVE_NETINET_IN_H 1
#define HAVE_PWD_H 1
#define HAVE_STRINGS_H 1
#define HAVE_SYS_PARAM_H 1
#define HAVE_SYS_RESOURCE_H 1
#define HAVE_SYS_SELECT_H 1
#define HAVE_SYS_SOCKET_H 1
#define HAVE_SYS_STAT_H 1
#define HAVE_SYS_TIME_H 1
#define HAVE_SYS_TIMES_H 1
#define HAVE_SYS_UTSNAME_H 1
#define HAVE_UNISTD_H 1
#define HAVE_UTIME_H 1
#define HAVE_ERRNO_H 1
#define HAVE_INTTYPES_H 1
#define HAVE_LIMITS_H 1
#define HAVE_LOCALE_H 1
#define HAVE_STDARG_H 1
#define HAVE_STDBOOL_H 1
#define HAVE_STDINT_H 1
#define HAVE_STRING_H 1
#define HAVE_DECL_SIGSETJMP 1
#define HAVE_DECL_SIGLONGJMP 1
#define HAVE_POSIX_SETJMP 1
#define RETSIGTYPE void
#define HAVE_DECL_SIZE_MAX 1
#define R_SOCKLEN_T socklen_t
#define HAVE_STACK_T 1
#define HAVE_INTPTR_T 1
#define HAVE_UINTPTR_T 1
#define R_INLINE inline
#define SIZEOF_INT 4
#define INT_32_BITS 1
#define SIZEOF_LONG 8
#define SIZEOF_LONG_LONG 8
#define SIZEOF_DOUBLE 8
#define SIZEOF_LONG_DOUBLE 16
#define SIZEOF_SIZE_T 8
configure: exit 1
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