Current tag values for OT studies and trees 2012 01 24

tags

10loci
4-loci
5.8S
67 loci
aa
ACT
AFLP
aflR
alfR
alt 1a
alt a1
amino acid
ATp6
ATP6
BEAST
benA
BI
Brn
b-tub
B-tub
B-TUB
b-tub2
b-tubulin
CAl
CAL
caM
choose me
choose me;
Choose me
chronogram
CHS
CHS1
COX2
COX3
COX-II
cpDNA
cpDNA & morphology
cpDNA & nrDNA
de
dele
delet
delete
delete me
Ef-1
EF-1
Environmental
enzyme profile
FG1093
G3PDH
gapC
GAPDH
gene family phylogeny
gene: PHYP
gpd
GPD
GPD3
GPDH
HIS
HIS3
histone H3
HMG
HPS60
HSP60
IGS
IGS1
IGS-1
include for Allomyces
Include simulated data
ingroup
ingroup added
ingroup added;
ingroup added for best ML only
ingroup added for both trees
ingroup added for combinado
ingroup added for combined gene tree
ingroup added for Combined mol morph
ingroup added for Fig. 1
ingroup added for Fig. 1a
ingroup added for Fig. 2
ingroup added for Fig. 2d
ingroup added for Fig. 7
ingroup added for ml best tree
ingroup added for ML combined tree
ingroup added for ML studies only
ingroup added for r8s chrongram
ingroup added for rbcL tree
ingroup added for T
ingroup added for trn ML tree 2，ITS ML 2
ingroup added to three tree; see comments
ingrouped
ingroup non monophyletic
ingroup ok
introgression
ITS
ITS1
ITS2
lab codes
locusDO
LOV domain of MADA  homologs
LSU
MAT1-1
MAT1-2
MCM7
Mitochondrial
mitochondrial rns gene
mit rns gene
ML
ML/NJ?
more taxa than in the figure
morphology
Morphology
MP
MP?
MS204
mtDNA
mtLSU
mtSSU
NAR
New species
NJ
nor-1
nrDNA
nrITS
nucDNA
outdated taxa
Paralog
PDA
pdf not found
PHO6
plant taxa
population study
QMA
RBP2
rDNA
Reference could not be found
rooted
rooted;
RPB1
RPB-1
RPB2
RPB-2
RPBA
simulated data?
SOD2
SSU
strict
study contains plant taxa
Suppl.
taxa differs from figure
topology differ from figure
topology differs from figure
UFM
unmapped terminals
unrooted
UPGMA
UP-PCR DNA