Skip to content

Instantly share code, notes, and snippets.

@chmille4

chmille4/index.html

Last active December 17, 2015 19:33
Show Gist options
  • Save chmille4/6dd6e4e6c837060fc8c2 to your computer and use it in GitHub Desktop.
Save chmille4/6dd6e4e6c837060fc8c2 to your computer and use it in GitHub Desktop.
Download ZIP
Iobio.viz Gene Modal
Raw
readme.md

A gene modal chart that dispalys multiple transcripts

Raw
index.html
<!DOCTYPE html>
<html>
<head>
<script src="https://cdnjs.cloudflare.com/ajax/libs/d3/3.5.5/d3.min.js" charset="utf-8"></script>
<script src="http://iobio.io/public/js/iobio.viz.min.js"></script>
<link rel="stylesheet" type="text/css" href="http://iobio.io/public/css/iobio.viz.min.css">
<style type="text/css">
body {
font-family: "Helvetica Neue", Helvetica, Arial, sans-serif;
margin: auto;
position: relative;
width: 960px;
}
.iobio-gene .utr rect { fill: rgba(120,176,194,0.6); stroke: rgb(120,176,194); }
.iobio-gene .cds rect { fill: rgba(120,176,194,0.6); stroke: rgb(120,176,194); }
</style>
</head>
<body>
<div id="gene-viz"></div>
<script>
var trackHeight = 20,
m = [44, 60, 30+trackHeight, 120],
w = 960,
h = 500;
var format = d3.format("0,000");
d3.json('transcript.json', function(data) {
var selection = d3.select("#gene-viz").datum( data );
var chart = iobio.viz.gene()
.start(function(d) { return d.start; })
.end(function(d) { return d.end; })
.title(function(d) { return d.transcript_id; })
.height(h)
.width(w)
.trackHeight(trackHeight)
.margin({top: m[0], right: m[1], bottom: m[2], left:m[3]})
.tooltip(function(d) { return d.feature_type + ' ' + format(d.start) + ' - ' + format(d.end); })
chart( selection );
});
</script>
</body>
</html>
Raw
transcript.json
[{"chr":"chr17","annotation_source":"HAVANA","feature_type":"transcript","start":41197580,"end":41277346,"score":".","strand":"-","phase":".","transcript_id":"ENST00000586385.1","gene_name":"BRCA1","transcript_type":"protein_coding","transcript_status":"PUTATIVE","level":2,"features":[{"chr":"chr17","annotation_source":"HAVANA","feature_type":"exon","start":"41277199","end":"41277346","score":".","strand":"-","phase":".","transcript_id":"ENST00000586385.1"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"CDS","start":"41277199","end":"41277202","score":".","strand":"-","phase":"0","transcript_id":"ENST00000586385.1"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"start_codon","start":"41277200","end":"41277202","score":".","strand":"-","phase":"0","transcript_id":"ENST00000586385.1"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"exon","start":"41215891","end":"41215968","score":".","strand":"-","phase":".","transcript_id":"ENST00000586385.1"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"CDS","start":"41215891","end":"41215968","score":".","strand":"-","phase":"2","transcript_id":"ENST00000586385.1"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"exon","start":"41215350","end":"41215390","score":".","strand":"-","phase":".","transcript_id":"ENST00000586385.1"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"CDS","start":"41215350","end":"41215390","score":".","strand":"-","phase":"2","transcript_id":"ENST00000586385.1"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"exon","start":"41209069","end":"41209152","score":".","strand":"-","phase":".","transcript_id":"ENST00000586385.1"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"CDS","start":"41209069","end":"41209152","score":".","strand":"-","phase":"0","transcript_id":"ENST00000586385.1"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"exon","start":"41203080","end":"41203134","score":".","strand":"-","phase":".","transcript_id":"ENST00000586385.1"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"CDS","start":"41203080","end":"41203134","score":".","strand":"-","phase":"0","transcript_id":"ENST00000586385.1"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"exon","start":"41201138","end":"41201211","score":".","strand":"-","phase":".","transcript_id":"ENST00000586385.1"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"CDS","start":"41201138","end":"41201211","score":".","strand":"-","phase":"2","transcript_id":"ENST00000586385.1"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"exon","start":"41199660","end":"41199720","score":".","strand":"-","phase":".","transcript_id":"ENST00000586385.1"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"CDS","start":"41199660","end":"41199720","score":".","strand":"-","phase":"0","transcript_id":"ENST00000586385.1"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"exon","start":"41197580","end":"41197819","score":".","strand":"-","phase":".","transcript_id":"ENST00000586385.1"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"CDS","start":"41197698","end":"41197819","score":".","strand":"-","phase":"2","transcript_id":"ENST00000586385.1"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"stop_codon","start":"41197695","end":"41197697","score":".","strand":"-","phase":"0","transcript_id":"ENST00000586385.1"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"UTR","start":"41277203","end":"41277346","score":".","strand":"-","phase":".","transcript_id":"ENST00000586385.1"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"UTR","start":"41197580","end":"41197697","score":".","strand":"-","phase":".","transcript_id":"ENST00000586385.1"}],"center":41246583.5},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"transcript","start":41196313,"end":41277468,"score":".","strand":"-","phase":".","transcript_id":"ENST00000309486.4","gene_name":"BRCA1","transcript_type":"protein_coding","transcript_status":"KNOWN","level":3,"features":[{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41277294","end":"41277468","score":".","strand":"-","phase":".","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41276034","end":"41276132","score":".","strand":"-","phase":".","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41258473","end":"41258550","score":".","strand":"-","phase":".","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41256885","end":"41256973","score":".","strand":"-","phase":".","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41256139","end":"41256278","score":".","strand":"-","phase":".","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41251792","end":"41251897","score":".","strand":"-","phase":".","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41249261","end":"41249306","score":".","strand":"-","phase":".","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41247863","end":"41247939","score":".","strand":"-","phase":".","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41243452","end":"41246877","score":".","strand":"-","phase":".","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41243452","end":"41246659","score":".","strand":"-","phase":"0","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"start_codon","start":"41246657","end":"41246659","score":".","strand":"-","phase":"0","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41242961","end":"41243049","score":".","strand":"-","phase":".","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41242961","end":"41243049","score":".","strand":"-","phase":"2","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41234421","end":"41234592","score":".","strand":"-","phase":".","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41234421","end":"41234592","score":".","strand":"-","phase":"0","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41228505","end":"41228631","score":".","strand":"-","phase":".","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41228505","end":"41228631","score":".","strand":"-","phase":"2","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41226348","end":"41226538","score":".","strand":"-","phase":".","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41226348","end":"41226538","score":".","strand":"-","phase":"1","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41222945","end":"41223255","score":".","strand":"-","phase":".","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41222945","end":"41223255","score":".","strand":"-","phase":"2","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41219625","end":"41219712","score":".","strand":"-","phase":".","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41219625","end":"41219712","score":".","strand":"-","phase":"0","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41215891","end":"41215968","score":".","strand":"-","phase":".","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41215891","end":"41215968","score":".","strand":"-","phase":"2","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41215350","end":"41215390","score":".","strand":"-","phase":".","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41215350","end":"41215390","score":".","strand":"-","phase":"2","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41209069","end":"41209152","score":".","strand":"-","phase":".","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41209069","end":"41209152","score":".","strand":"-","phase":"0","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41203080","end":"41203134","score":".","strand":"-","phase":".","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41203080","end":"41203134","score":".","strand":"-","phase":"0","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41201138","end":"41201211","score":".","strand":"-","phase":".","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41201138","end":"41201211","score":".","strand":"-","phase":"2","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41199660","end":"41199720","score":".","strand":"-","phase":".","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41199660","end":"41199720","score":".","strand":"-","phase":"0","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41196313","end":"41197819","score":".","strand":"-","phase":".","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41197698","end":"41197819","score":".","strand":"-","phase":"2","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"stop_codon","start":"41197695","end":"41197697","score":".","strand":"-","phase":"0","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"UTR","start":"41277294","end":"41277468","score":".","strand":"-","phase":".","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"UTR","start":"41276034","end":"41276132","score":".","strand":"-","phase":".","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"UTR","start":"41258473","end":"41258550","score":".","strand":"-","phase":".","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"UTR","start":"41256885","end":"41256973","score":".","strand":"-","phase":".","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"UTR","start":"41256139","end":"41256278","score":".","strand":"-","phase":".","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"UTR","start":"41251792","end":"41251897","score":".","strand":"-","phase":".","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"UTR","start":"41249261","end":"41249306","score":".","strand":"-","phase":".","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"UTR","start":"41247863","end":"41247939","score":".","strand":"-","phase":".","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"UTR","start":"41246660","end":"41246877","score":".","strand":"-","phase":".","transcript_id":"ENST00000309486.4"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"UTR","start":"41196313","end":"41197697","score":".","strand":"-","phase":".","transcript_id":"ENST00000309486.4"}],"center":41267292},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"transcript","start":41196313,"end":41277468,"score":".","strand":"-","phase":".","transcript_id":"ENST00000346315.3","gene_name":"BRCA1","transcript_type":"protein_coding","transcript_status":"KNOWN","level":3,"features":[{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41277294","end":"41277468","score":".","strand":"-","phase":".","transcript_id":"ENST00000346315.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41276034","end":"41276132","score":".","strand":"-","phase":".","transcript_id":"ENST00000346315.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41276034","end":"41276113","score":".","strand":"-","phase":"0","transcript_id":"ENST00000346315.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"start_codon","start":"41276111","end":"41276113","score":".","strand":"-","phase":"0","transcript_id":"ENST00000346315.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41267743","end":"41267796","score":".","strand":"-","phase":".","transcript_id":"ENST00000346315.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41267743","end":"41267796","score":".","strand":"-","phase":"1","transcript_id":"ENST00000346315.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41258473","end":"41258550","score":".","strand":"-","phase":".","transcript_id":"ENST00000346315.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41258473","end":"41258550","score":".","strand":"-","phase":"1","transcript_id":"ENST00000346315.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41256885","end":"41256973","score":".","strand":"-","phase":".","transcript_id":"ENST00000346315.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41256885","end":"41256973","score":".","strand":"-","phase":"1","transcript_id":"ENST00000346315.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41256139","end":"41256278","score":".","strand":"-","phase":".","transcript_id":"ENST00000346315.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41256139","end":"41256278","score":".","strand":"-","phase":"2","transcript_id":"ENST00000346315.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41251792","end":"41251897","score":".","strand":"-","phase":".","transcript_id":"ENST00000346315.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41251792","end":"41251897","score":".","strand":"-","phase":"0","transcript_id":"ENST00000346315.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41249261","end":"41249306","score":".","strand":"-","phase":".","transcript_id":"ENST00000346315.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41249261","end":"41249306","score":".","strand":"-","phase":"2","transcript_id":"ENST00000346315.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41247863","end":"41247939","score":".","strand":"-","phase":".","transcript_id":"ENST00000346315.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41247863","end":"41247939","score":".","strand":"-","phase":"1","transcript_id":"ENST00000346315.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41243452","end":"41246877","score":".","strand":"-","phase":".","transcript_id":"ENST00000346315.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41243452","end":"41246877","score":".","strand":"-","phase":"2","transcript_id":"ENST00000346315.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41242961","end":"41243049","score":".","strand":"-","phase":".","transcript_id":"ENST00000346315.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41242961","end":"41243049","score":".","strand":"-","phase":"2","transcript_id":"ENST00000346315.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41234421","end":"41234592","score":".","strand":"-","phase":".","transcript_id":"ENST00000346315.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41234421","end":"41234592","score":".","strand":"-","phase":"0","transcript_id":"ENST00000346315.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41215891","end":"41215968","score":".","strand":"-","phase":".","transcript_id":"ENST00000346315.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41215891","end":"41215968","score":".","strand":"-","phase":"2","transcript_id":"ENST00000346315.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41215350","end":"41215390","score":".","strand":"-","phase":".","transcript_id":"ENST00000346315.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41215350","end":"41215390","score":".","strand":"-","phase":"2","transcript_id":"ENST00000346315.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41209069","end":"41209152","score":".","strand":"-","phase":".","transcript_id":"ENST00000346315.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41209069","end":"41209152","score":".","strand":"-","phase":"0","transcript_id":"ENST00000346315.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41203080","end":"41203134","score":".","strand":"-","phase":".","transcript_id":"ENST00000346315.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41203080","end":"41203134","score":".","strand":"-","phase":"0","transcript_id":"ENST00000346315.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41201138","end":"41201211","score":".","strand":"-","phase":".","transcript_id":"ENST00000346315.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41201138","end":"41201211","score":".","strand":"-","phase":"2","transcript_id":"ENST00000346315.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41199660","end":"41199720","score":".","strand":"-","phase":".","transcript_id":"ENST00000346315.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41199660","end":"41199720","score":".","strand":"-","phase":"0","transcript_id":"ENST00000346315.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41196313","end":"41197819","score":".","strand":"-","phase":".","transcript_id":"ENST00000346315.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41197698","end":"41197819","score":".","strand":"-","phase":"2","transcript_id":"ENST00000346315.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"stop_codon","start":"41197695","end":"41197697","score":".","strand":"-","phase":"0","transcript_id":"ENST00000346315.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"UTR","start":"41277294","end":"41277468","score":".","strand":"-","phase":".","transcript_id":"ENST00000346315.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"UTR","start":"41276114","end":"41276132","score":".","strand":"-","phase":".","transcript_id":"ENST00000346315.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"UTR","start":"41196313","end":"41197697","score":".","strand":"-","phase":".","transcript_id":"ENST00000346315.3"}],"center":41225194.5},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"transcript","start":41196313,"end":41276132,"score":".","strand":"-","phase":".","transcript_id":"ENST00000351666.3","gene_name":"BRCA1","transcript_type":"protein_coding","transcript_status":"KNOWN","level":3,"features":[{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41276034","end":"41276132","score":".","strand":"-","phase":".","transcript_id":"ENST00000351666.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41276034","end":"41276113","score":".","strand":"-","phase":"0","transcript_id":"ENST00000351666.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"start_codon","start":"41276111","end":"41276113","score":".","strand":"-","phase":"0","transcript_id":"ENST00000351666.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41267743","end":"41267796","score":".","strand":"-","phase":".","transcript_id":"ENST00000351666.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41267743","end":"41267796","score":".","strand":"-","phase":"1","transcript_id":"ENST00000351666.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41258473","end":"41258550","score":".","strand":"-","phase":".","transcript_id":"ENST00000351666.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41258473","end":"41258550","score":".","strand":"-","phase":"1","transcript_id":"ENST00000351666.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41256885","end":"41256973","score":".","strand":"-","phase":".","transcript_id":"ENST00000351666.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41256885","end":"41256973","score":".","strand":"-","phase":"1","transcript_id":"ENST00000351666.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41256139","end":"41256278","score":".","strand":"-","phase":".","transcript_id":"ENST00000351666.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41256139","end":"41256278","score":".","strand":"-","phase":"2","transcript_id":"ENST00000351666.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41251792","end":"41251897","score":".","strand":"-","phase":".","transcript_id":"ENST00000351666.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41251792","end":"41251897","score":".","strand":"-","phase":"0","transcript_id":"ENST00000351666.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41242961","end":"41243049","score":".","strand":"-","phase":".","transcript_id":"ENST00000351666.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41242961","end":"41243049","score":".","strand":"-","phase":"2","transcript_id":"ENST00000351666.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41234421","end":"41234592","score":".","strand":"-","phase":".","transcript_id":"ENST00000351666.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41234421","end":"41234592","score":".","strand":"-","phase":"0","transcript_id":"ENST00000351666.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41228505","end":"41228631","score":".","strand":"-","phase":".","transcript_id":"ENST00000351666.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41228505","end":"41228631","score":".","strand":"-","phase":"2","transcript_id":"ENST00000351666.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41226348","end":"41226538","score":".","strand":"-","phase":".","transcript_id":"ENST00000351666.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41226348","end":"41226538","score":".","strand":"-","phase":"1","transcript_id":"ENST00000351666.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41222945","end":"41223255","score":".","strand":"-","phase":".","transcript_id":"ENST00000351666.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41222945","end":"41223255","score":".","strand":"-","phase":"2","transcript_id":"ENST00000351666.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41219625","end":"41219712","score":".","strand":"-","phase":".","transcript_id":"ENST00000351666.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41219625","end":"41219712","score":".","strand":"-","phase":"0","transcript_id":"ENST00000351666.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41215891","end":"41215968","score":".","strand":"-","phase":".","transcript_id":"ENST00000351666.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41215891","end":"41215968","score":".","strand":"-","phase":"2","transcript_id":"ENST00000351666.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41215350","end":"41215390","score":".","strand":"-","phase":".","transcript_id":"ENST00000351666.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41215350","end":"41215390","score":".","strand":"-","phase":"2","transcript_id":"ENST00000351666.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41209069","end":"41209152","score":".","strand":"-","phase":".","transcript_id":"ENST00000351666.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41209069","end":"41209152","score":".","strand":"-","phase":"0","transcript_id":"ENST00000351666.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41203080","end":"41203134","score":".","strand":"-","phase":".","transcript_id":"ENST00000351666.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41203080","end":"41203134","score":".","strand":"-","phase":"0","transcript_id":"ENST00000351666.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41201138","end":"41201211","score":".","strand":"-","phase":".","transcript_id":"ENST00000351666.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41201138","end":"41201211","score":".","strand":"-","phase":"2","transcript_id":"ENST00000351666.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41199660","end":"41199720","score":".","strand":"-","phase":".","transcript_id":"ENST00000351666.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41199660","end":"41199720","score":".","strand":"-","phase":"0","transcript_id":"ENST00000351666.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41196313","end":"41197819","score":".","strand":"-","phase":".","transcript_id":"ENST00000351666.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41197698","end":"41197819","score":".","strand":"-","phase":"2","transcript_id":"ENST00000351666.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"stop_codon","start":"41197695","end":"41197697","score":".","strand":"-","phase":"0","transcript_id":"ENST00000351666.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"UTR","start":"41276114","end":"41276132","score":".","strand":"-","phase":".","transcript_id":"ENST00000351666.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"UTR","start":"41196313","end":"41197697","score":".","strand":"-","phase":".","transcript_id":"ENST00000351666.3"}],"center":41263146.5},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"transcript","start":41196313,"end":41277500,"score":".","strand":"-","phase":".","transcript_id":"ENST00000352993.3","gene_name":"BRCA1","transcript_type":"protein_coding","transcript_status":"KNOWN","level":3,"features":[{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41277288","end":"41277500","score":".","strand":"-","phase":".","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41276034","end":"41276132","score":".","strand":"-","phase":".","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41276034","end":"41276113","score":".","strand":"-","phase":"0","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"start_codon","start":"41276111","end":"41276113","score":".","strand":"-","phase":"0","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41267743","end":"41267796","score":".","strand":"-","phase":".","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41267743","end":"41267796","score":".","strand":"-","phase":"1","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41258473","end":"41258550","score":".","strand":"-","phase":".","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41258473","end":"41258550","score":".","strand":"-","phase":"1","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41256885","end":"41256973","score":".","strand":"-","phase":".","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41256885","end":"41256973","score":".","strand":"-","phase":"1","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41256139","end":"41256278","score":".","strand":"-","phase":".","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41256139","end":"41256278","score":".","strand":"-","phase":"2","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41251792","end":"41251897","score":".","strand":"-","phase":".","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41251792","end":"41251897","score":".","strand":"-","phase":"0","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41249261","end":"41249306","score":".","strand":"-","phase":".","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41249261","end":"41249306","score":".","strand":"-","phase":"2","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41247863","end":"41247939","score":".","strand":"-","phase":".","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41247863","end":"41247939","score":".","strand":"-","phase":"1","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41242961","end":"41243049","score":".","strand":"-","phase":".","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41242961","end":"41243049","score":".","strand":"-","phase":"2","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41234421","end":"41234592","score":".","strand":"-","phase":".","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41234421","end":"41234592","score":".","strand":"-","phase":"0","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41228505","end":"41228631","score":".","strand":"-","phase":".","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41228505","end":"41228631","score":".","strand":"-","phase":"2","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41226348","end":"41226538","score":".","strand":"-","phase":".","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41226348","end":"41226538","score":".","strand":"-","phase":"1","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41222945","end":"41223255","score":".","strand":"-","phase":".","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41222945","end":"41223255","score":".","strand":"-","phase":"2","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41219625","end":"41219712","score":".","strand":"-","phase":".","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41219625","end":"41219712","score":".","strand":"-","phase":"0","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41215891","end":"41215968","score":".","strand":"-","phase":".","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41215891","end":"41215968","score":".","strand":"-","phase":"2","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41215350","end":"41215390","score":".","strand":"-","phase":".","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41215350","end":"41215390","score":".","strand":"-","phase":"2","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41209069","end":"41209152","score":".","strand":"-","phase":".","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41209069","end":"41209152","score":".","strand":"-","phase":"0","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41203080","end":"41203134","score":".","strand":"-","phase":".","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41203080","end":"41203134","score":".","strand":"-","phase":"0","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41201138","end":"41201211","score":".","strand":"-","phase":".","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41201138","end":"41201211","score":".","strand":"-","phase":"2","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41199660","end":"41199720","score":".","strand":"-","phase":".","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41199660","end":"41199720","score":".","strand":"-","phase":"0","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41196313","end":"41197819","score":".","strand":"-","phase":".","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41197698","end":"41197819","score":".","strand":"-","phase":"2","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"stop_codon","start":"41197695","end":"41197697","score":".","strand":"-","phase":"0","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"UTR","start":"41277288","end":"41277500","score":".","strand":"-","phase":".","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"UTR","start":"41276114","end":"41276132","score":".","strand":"-","phase":".","transcript_id":"ENST00000352993.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"UTR","start":"41196313","end":"41197697","score":".","strand":"-","phase":".","transcript_id":"ENST00000352993.3"}],"center":41263146.5},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"transcript","start":41196313,"end":41277500,"score":".","strand":"-","phase":".","transcript_id":"ENST00000354071.3","gene_name":"BRCA1","transcript_type":"protein_coding","transcript_status":"KNOWN","level":3,"features":[{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41277288","end":"41277500","score":".","strand":"-","phase":".","transcript_id":"ENST00000354071.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41276034","end":"41276132","score":".","strand":"-","phase":".","transcript_id":"ENST00000354071.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41276034","end":"41276113","score":".","strand":"-","phase":"0","transcript_id":"ENST00000354071.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"start_codon","start":"41276111","end":"41276113","score":".","strand":"-","phase":"0","transcript_id":"ENST00000354071.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41267743","end":"41267796","score":".","strand":"-","phase":".","transcript_id":"ENST00000354071.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41267743","end":"41267796","score":".","strand":"-","phase":"1","transcript_id":"ENST00000354071.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41258473","end":"41258550","score":".","strand":"-","phase":".","transcript_id":"ENST00000354071.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41258473","end":"41258550","score":".","strand":"-","phase":"1","transcript_id":"ENST00000354071.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41256885","end":"41256973","score":".","strand":"-","phase":".","transcript_id":"ENST00000354071.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41256885","end":"41256973","score":".","strand":"-","phase":"1","transcript_id":"ENST00000354071.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41256139","end":"41256278","score":".","strand":"-","phase":".","transcript_id":"ENST00000354071.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41256139","end":"41256278","score":".","strand":"-","phase":"2","transcript_id":"ENST00000354071.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41251792","end":"41251897","score":".","strand":"-","phase":".","transcript_id":"ENST00000354071.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41251792","end":"41251897","score":".","strand":"-","phase":"0","transcript_id":"ENST00000354071.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41249261","end":"41249306","score":".","strand":"-","phase":".","transcript_id":"ENST00000354071.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41249261","end":"41249306","score":".","strand":"-","phase":"2","transcript_id":"ENST00000354071.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41247863","end":"41247939","score":".","strand":"-","phase":".","transcript_id":"ENST00000354071.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41247863","end":"41247939","score":".","strand":"-","phase":"1","transcript_id":"ENST00000354071.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41243452","end":"41246877","score":".","strand":"-","phase":".","transcript_id":"ENST00000354071.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41243452","end":"41246877","score":".","strand":"-","phase":"2","transcript_id":"ENST00000354071.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41242961","end":"41243049","score":".","strand":"-","phase":".","transcript_id":"ENST00000354071.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41242961","end":"41243049","score":".","strand":"-","phase":"2","transcript_id":"ENST00000354071.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41234421","end":"41234592","score":".","strand":"-","phase":".","transcript_id":"ENST00000354071.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41234421","end":"41234592","score":".","strand":"-","phase":"0","transcript_id":"ENST00000354071.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41215350","end":"41215390","score":".","strand":"-","phase":".","transcript_id":"ENST00000354071.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41215350","end":"41215390","score":".","strand":"-","phase":"2","transcript_id":"ENST00000354071.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41209069","end":"41209152","score":".","strand":"-","phase":".","transcript_id":"ENST00000354071.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41209069","end":"41209152","score":".","strand":"-","phase":"0","transcript_id":"ENST00000354071.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41203080","end":"41203134","score":".","strand":"-","phase":".","transcript_id":"ENST00000354071.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41203080","end":"41203134","score":".","strand":"-","phase":"0","transcript_id":"ENST00000354071.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41201138","end":"41201211","score":".","strand":"-","phase":".","transcript_id":"ENST00000354071.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41201138","end":"41201211","score":".","strand":"-","phase":"2","transcript_id":"ENST00000354071.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41199660","end":"41199720","score":".","strand":"-","phase":".","transcript_id":"ENST00000354071.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41199660","end":"41199720","score":".","strand":"-","phase":"0","transcript_id":"ENST00000354071.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"exon","start":"41196313","end":"41197819","score":".","strand":"-","phase":".","transcript_id":"ENST00000354071.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"CDS","start":"41197698","end":"41197819","score":".","strand":"-","phase":"2","transcript_id":"ENST00000354071.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"stop_codon","start":"41197695","end":"41197697","score":".","strand":"-","phase":"0","transcript_id":"ENST00000354071.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"UTR","start":"41277288","end":"41277500","score":".","strand":"-","phase":".","transcript_id":"ENST00000354071.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"UTR","start":"41276114","end":"41276132","score":".","strand":"-","phase":".","transcript_id":"ENST00000354071.3"},{"chr":"chr17","annotation_source":"ENSEMBL","feature_type":"UTR","start":"41196313","end":"41197697","score":".","strand":"-","phase":".","transcript_id":"ENST00000354071.3"}],"center":41224905.5},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"transcript","start":41196312,"end":41277387,"score":".","strand":"-","phase":".","transcript_id":"ENST00000357654.3","gene_name":"BRCA1","transcript_type":"protein_coding","transcript_status":"KNOWN","level":2,"features":[{"chr":"chr17","annotation_source":"HAVANA","feature_type":"exon","start":"41277288","end":"41277387","score":".","strand":"-","phase":".","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"exon","start":"41276034","end":"41276132","score":".","strand":"-","phase":".","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"CDS","start":"41276034","end":"41276113","score":".","strand":"-","phase":"0","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"start_codon","start":"41276111","end":"41276113","score":".","strand":"-","phase":"0","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"exon","start":"41267743","end":"41267796","score":".","strand":"-","phase":".","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"CDS","start":"41267743","end":"41267796","score":".","strand":"-","phase":"1","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"exon","start":"41258473","end":"41258550","score":".","strand":"-","phase":".","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"CDS","start":"41258473","end":"41258550","score":".","strand":"-","phase":"1","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"exon","start":"41256885","end":"41256973","score":".","strand":"-","phase":".","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"CDS","start":"41256885","end":"41256973","score":".","strand":"-","phase":"1","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"exon","start":"41256139","end":"41256278","score":".","strand":"-","phase":".","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"CDS","start":"41256139","end":"41256278","score":".","strand":"-","phase":"2","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"exon","start":"41251792","end":"41251897","score":".","strand":"-","phase":".","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"CDS","start":"41251792","end":"41251897","score":".","strand":"-","phase":"0","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"exon","start":"41249261","end":"41249306","score":".","strand":"-","phase":".","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"CDS","start":"41249261","end":"41249306","score":".","strand":"-","phase":"2","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"exon","start":"41247863","end":"41247939","score":".","strand":"-","phase":".","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"CDS","start":"41247863","end":"41247939","score":".","strand":"-","phase":"1","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"exon","start":"41243452","end":"41246877","score":".","strand":"-","phase":".","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"CDS","start":"41243452","end":"41246877","score":".","strand":"-","phase":"2","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"exon","start":"41242961","end":"41243049","score":".","strand":"-","phase":".","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"CDS","start":"41242961","end":"41243049","score":".","strand":"-","phase":"2","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"exon","start":"41234421","end":"41234592","score":".","strand":"-","phase":".","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"CDS","start":"41234421","end":"41234592","score":".","strand":"-","phase":"0","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"exon","start":"41228505","end":"41228631","score":".","strand":"-","phase":".","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"CDS","start":"41228505","end":"41228631","score":".","strand":"-","phase":"2","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"exon","start":"41226348","end":"41226538","score":".","strand":"-","phase":".","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"CDS","start":"41226348","end":"41226538","score":".","strand":"-","phase":"1","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"exon","start":"41222945","end":"41223255","score":".","strand":"-","phase":".","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"CDS","start":"41222945","end":"41223255","score":".","strand":"-","phase":"2","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"exon","start":"41219625","end":"41219712","score":".","strand":"-","phase":".","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"CDS","start":"41219625","end":"41219712","score":".","strand":"-","phase":"0","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"exon","start":"41215891","end":"41215968","score":".","strand":"-","phase":".","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"CDS","start":"41215891","end":"41215968","score":".","strand":"-","phase":"2","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"exon","start":"41215350","end":"41215390","score":".","strand":"-","phase":".","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"CDS","start":"41215350","end":"41215390","score":".","strand":"-","phase":"2","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"exon","start":"41209069","end":"41209152","score":".","strand":"-","phase":".","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"CDS","start":"41209069","end":"41209152","score":".","strand":"-","phase":"0","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"exon","start":"41203080","end":"41203134","score":".","strand":"-","phase":".","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"CDS","start":"41203080","end":"41203134","score":".","strand":"-","phase":"0","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"exon","start":"41201138","end":"41201211","score":".","strand":"-","phase":".","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"CDS","start":"41201138","end":"41201211","score":".","strand":"-","phase":"2","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"exon","start":"41199660","end":"41199720","score":".","strand":"-","phase":".","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"CDS","start":"41199660","end":"41199720","score":".","strand":"-","phase":"0","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"exon","start":"41196312","end":"41197819","score":".","strand":"-","phase":".","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"CDS","start":"41197698","end":"41197819","score":".","strand":"-","phase":"2","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"stop_codon","start":"41197695","end":"41197697","score":".","strand":"-","phase":"0","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"UTR","start":"41277288","end":"41277387","score":".","strand":"-","phase":".","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"UTR","start":"41276114","end":"41276132","score":".","strand":"-","phase":".","transcript_id":"ENST00000357654.3"},{"chr":"chr17","annotation_source":"HAVANA","feature_type":"UTR","start":"41196312","end":"41197697","score":".","strand":"-","phase":".","transcript_id":"ENST00000357654.3"}],"center":41263146.5}]
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment