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July 28, 2022 20:22
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function for loading IRIS data into yt from xarray
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import xarray as xr | |
import yt | |
import os | |
import numpy as np | |
import cartopy.feature as cfeature | |
import cartopy.crs as ccrs | |
ddir = os.path.join(yt.config.ytcfg.get('yt','test_data_dir'), 'sample_nc') | |
# https://ds.iris.edu/files/products/emc/emc-files/GYPSUM_percent.nc : a global model | |
# https://ds.iris.edu/files/products/emc/emc-files/wUS-SH-2010_percent.nc : a non-global model covering the western US | |
datasets = { | |
"internal_geographic_partial": os.path.join(ddir,'wUS-SH-2010_percent.nc'), | |
"internal_geographic_global": os.path.join(ddir,'GYPSUM_percent.nc'), | |
} | |
def get_internal_IRIS(case): | |
# both datasets have the same variables and dimension order | |
fi = datasets[case] | |
with xr.open_dataset(fi) as xr_ds: | |
dvs = xr_ds.dvs.to_masked_array().data | |
deprng = [xr_ds.depth.data.min(), xr_ds.depth.data.max()] | |
lonrng=[xr_ds.longitude.data.min(), xr_ds.longitude.data.max()] | |
latrng=[xr_ds.latitude.data.min(), xr_ds.latitude.data.max()] | |
data = {'dvs': (dvs, "%")} | |
bbox = np.array([ | |
deprng, | |
latrng, | |
lonrng | |
]) | |
dims = ['depth', 'latitude', 'longitude'] | |
return yt.load_uniform_grid(data, data['dvs'][0].shape, 1.0, | |
geometry=("internal_geographic", dims), | |
bbox=bbox) |
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