Created
June 10, 2023 21:01
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install `cellpose` on MacOS with `conda` and `pip`
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# remove previous conda environment (optional) | |
conda deactivate | |
conda remove --name cellpose --all | |
# create your `cellpose` environment | |
conda create --name cellpose | |
# install dependencies and `cellpose[gui]` package from `conda-forge` | |
conda activate cellpose | |
conda install -c conda-forge pyqt pyqtgraph 'cellpose[gui]' | |
# add missing new dependencies and update `cellpose[gui]` to the latest version | |
conda install -c conda-forge roifile superqt | |
pip install --no-deps --upgrade 'cellpose[gui]' |
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