Created
November 4, 2021 17:21
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chembl sqlite query to get all useful info
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| select | |
| activities.*, | |
| assays.assay_id, | |
| assays.doc_id, | |
| assays.description, | |
| assays.assay_type, | |
| assays.assay_test_type, | |
| assays.assay_organism, | |
| assays.assay_tax_id, | |
| assays.assay_strain, | |
| assays.assay_tissue, | |
| assays.assay_cell_type, | |
| assays.assay_subcellular_fraction, | |
| assays.tid, | |
| assays.relationship_type, | |
| assays.confidence_score, | |
| assays.chembl_id as assay_chembl_id, | |
| molecule_dictionary.chembl_id, | |
| molecule_dictionary.molregno, | |
| molecule_dictionary.pref_name, | |
| molecule_dictionary.chembl_id, | |
| molecule_dictionary.structure_type, | |
| molecule_dictionary.molecule_type, | |
| compound_structures.canonical_smiles, | |
| target_dictionary.chembl_id as target_chembl_id, | |
| target_dictionary.organism, | |
| target_dictionary.target_type, | |
| target_dictionary.pref_name, | |
| target_dictionary.tid, | |
| target_dictionary.organism, | |
| target_dictionary.organism, | |
| docs.doc_id, | |
| docs.journal, | |
| docs.year, | |
| docs.doi, | |
| docs.chembl_id, | |
| docs.doc_type | |
| from activities, assays, molecule_dictionary, compound_structures, target_dictionary, docs | |
| where compound_structures.molregno = molecule_dictionary.molregno | |
| and molecule_dictionary.molregno = activities.molregno | |
| and assays.tid = target_dictionary.tid and assays.assay_id = activities.assay_id ; |
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