peterhurford

brew install pandoc
brew tap homebrew/cask
brew install --cask basictex
eval "$(/usr/libexec/path_helper)"
# Update $PATH to include `/usr/local/texlive/2022basic/bin/universal-darwin`
sudo tlmgr update --self
sudo tlmgr install texliveonfly
sudo tlmgr install xelatex
sudo tlmgr install adjustbox
sudo tlmgr install tcolorbox

sirselim

Jetson Xavier basecalling notes

initial basecalling runs

'fast' flip-flop calling on the Jetson Xavier

guppy_basecaller --disable_pings --compress_fastq -c dna_r9.4.1_450bps_fast.cfg -i flongle_fast5_pass/ -s flongle_test2 -x 'auto' --recursive 

geddski

atom-text-editor::shadow {
  .line-numbers{
    padding-left: 4px !important;
  }
  
  .git-line-modified, .git-line-added{
    margin-left: -4px;
    padding-left: 2px !important;
    opacity: .5
  }

magicznyleszek

Jekyll & Liquid Cheatsheet

A list of the most common functionalities in Jekyll (Liquid). You can use Jekyll with GitHub Pages, just make sure you are using the proper version.

Running

Running a local server for testing purposes:

thigm85

require(MASS)
require(ggplot2)
require(scales)
require(gridExtra)

pca <- prcomp(iris[,-5],
              center = TRUE,
              scale. = TRUE) 

prop.pca = pca$sdev^2/sum(pca$sdev^2)

drawveloper

This can reduce files to ~15% of their size (2.3M to 345K, in one case) with no obvious degradation of quality.

ghostscript -sDEVICE=pdfwrite -dCompatibilityLevel=1.4 -dPDFSETTINGS=/printer -dNOPAUSE -dQUIET -dBATCH -sOutputFile=output.pdf input.pdf

Other options for PDFSETTINGS:

• /screen selects low-resolution output similar to the Acrobat Distiller "Screen Optimized" setting.
• /ebook selects medium-resolution output similar to the Acrobat Distiller "eBook" setting.
• /printer selects output similar to the Acrobat Distiller "Print Optimized" setting.
• /prepress selects output similar to Acrobat Distiller "Prepress Optimized" setting.

killercup

/*
 * I add this to html files generated with pandoc.
 */

html {
  font-size: 100%;
  overflow-y: scroll;
  -webkit-text-size-adjust: 100%;
  -ms-text-size-adjust: 100%;
}

CristinaSolana

1. Clone your fork:

git clone [email protected]:YOUR-USERNAME/YOUR-FORKED-REPO.git

2. Add remote from original repository in your forked repository:

cd into/cloned/fork-repo
git remote add upstream git://github.com/ORIGINAL-DEV-USERNAME/REPO-YOU-FORKED-FROM.git
git fetch upstream