corneliusroemer

import argparse
import json


def extract_attribute(node_data, attribute: str) -> dict[str, str]:
    data = {}
    for name, node in node_data["nodes"].items():
        if attribute in node:
            data[name] = node[attribute]
    return data

corneliusroemer

[tool.poetry]
name = "nwkfmt"
version = "0.1.0"
description = "Simple Newick tree validator and formatter"
authors = ["Cornelius Roemer <[email protected]>"]
readme = "README.md"

[tool.poetry.scripts]
greet = "nwkfmt.cli:main"

corneliusroemer

>MN908947 (Wuhan-Hu-1/2019)
TTELLFLVMFLLTTKRTMFVFLVLLPLVSSQCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLND

corneliusroemer

{
  "nucMutLabelMap": {
    "A10195G": [
      "20I (Alpha, V1)"
    ],
    "A10317G": [
      "21J (Delta)"
    ],
    "A10323G": [
      "21J (Delta)",

corneliusroemer

corneliusroemer

// Future versions of Hyper may add additional config options,
// which will not automatically be merged into this file.
// See https://hyper.is#cfg for all currently supported options.

module.exports = {
  config: {
    // choose either `'stable'` for receiving highly polished,
    // or `'canary'` for less polished but more frequent updates
    updateChannel: 'stable',

corneliusroemer

jq 'if .topic == "devices_overview" then .timestamp =  (.timestamp * 1000 | round | tostring)  else . end' <out

corneliusroemer

diff -U 0 gry gryold | wdiff -d | colordiff

corneliusroemer

find . -name '*.gz' -exec gzip -ckd {} + > test.txt

corneliusroemer

function processInboxToSheet() {
  var threads = GmailApp.search("Undeliverable", 0, 500)
  //Replace ID with one of your private spreadsheets ID
  var sheet = SpreadsheetApp.openById("16RsL_4fh0WXSICw5VJDHVAKtija21JBxxxxxxxxx").getActiveSheet();
  for (var i = 0; i < threads.length; i++) {
    var messages = threads[i].getMessages();
    for (var j = 0; j < messages.length; j++){
      var subject = messages[j].getSubject();
      var content = messages[j].getPlainBody();
      var date = messages[j].getDate();