#Nextflow Docker File

nextflow.Dockerfile

# docker build --file manta.Dockerfile -t swantonlab/manta .
FROM continuumio/miniconda3
RUN apt-get update && apt-get install -y procps
RUN conda config --add channels defaults && \
    conda config --add channels bioconda && \
    conda config --add channels conda-forge
RUN conda create -n manta bioconda::manta=1.6.0 && conda clean -a
ENV PATH /opt/conda/envs/manta/bin:$PATH
RUN conda env export --name manta > manta.yml