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A first attempt at Django models for the Chado database schema.
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| # This is an auto-generated Django model module. | |
| # You'll have to do the following manually to clean this up: | |
| # * Rearrange models' order | |
| # * Make sure each model has one field with primary_key=True | |
| # Feel free to rename the models, but don't rename db_table values or field names. | |
| # | |
| # Also note: You'll have to insert the output of 'django-admin.py sqlcustom [appname]' | |
| # into your database. | |
| # | |
| # I made the following changes to the models generated using inspectdb | |
| # | |
| # 1.) a related_name field was created for Foreign Keys to avoid conflicts using %(class)s and the variable name. | |
| # This creates related names using the class name and var name. | |
| # | |
| # 2.) Correcting capitalization issues that resulted in improper foreign key relations for certain tables. | |
| # | |
| # 3.) Set the character length of gffattr and gff3attr to 100 (changed from -1). | |
| # | |
| # Create your models here. | |
| from django.db import models | |
| class Db(models.Model): | |
| db_id = models.IntegerField(primary_key=True) | |
| name = models.CharField(max_length=255, unique=True) | |
| description = models.CharField(max_length=255, blank=True) | |
| urlprefix = models.CharField(max_length=255, blank=True) | |
| url = models.CharField(max_length=255, blank=True) | |
| class Meta: | |
| db_table = u'db' | |
| class DbDbxrefCount(models.Model): | |
| name = models.CharField(max_length=255, blank=True) | |
| num_dbxrefs = models.BigIntegerField(null=True, blank=True) | |
| class Meta: | |
| db_table = u'db_dbxref_count' | |
| class Project(models.Model): | |
| project_id = models.IntegerField(primary_key=True) | |
| name = models.CharField(max_length=255, unique=True) | |
| description = models.CharField(max_length=255) | |
| class Meta: | |
| db_table = u'project' | |
| class Dbxref(models.Model): | |
| dbxref_id = models.IntegerField(primary_key=True) | |
| db = models.ForeignKey("Db", related_name="%(class)s_db" ) | |
| accession = models.CharField(max_length=255) | |
| version = models.CharField(max_length=255) | |
| description = models.TextField(blank=True) | |
| class Meta: | |
| db_table = u'dbxref' | |
| class Cv(models.Model): | |
| cv_id = models.IntegerField(primary_key=True) | |
| name = models.CharField(max_length=255, unique=True) | |
| definition = models.TextField(blank=True) | |
| class Meta: | |
| db_table = u'cv' | |
| class Cvtermsynonym(models.Model): | |
| cvtermsynonym_id = models.IntegerField(primary_key=True) | |
| cvterm = models.ForeignKey("Cvterm", related_name="%(class)s_cvterm" ) | |
| synonym = models.CharField(max_length=1024) | |
| type = models.ForeignKey("Cvterm", null=True, blank=True) | |
| class Meta: | |
| db_table = u'cvtermsynonym' | |
| class CvtermRelationship(models.Model): | |
| cvterm_relationship_id = models.IntegerField(primary_key=True) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| subject = models.ForeignKey("Cvterm", related_name="%(class)s_subject" ) | |
| object = models.ForeignKey("Cvterm", related_name="%(class)s_object" ) | |
| class Meta: | |
| db_table = u'cvterm_relationship' | |
| class CvtermDbxref(models.Model): | |
| cvterm_dbxref_id = models.IntegerField(primary_key=True) | |
| cvterm = models.ForeignKey("Cvterm", related_name="%(class)s_cvterm" ) | |
| dbxref = models.ForeignKey("Dbxref", related_name="%(class)s_dbxref" ) | |
| is_for_definition = models.IntegerField() | |
| class Meta: | |
| db_table = u'cvterm_dbxref' | |
| class Cvtermpath(models.Model): | |
| cvtermpath_id = models.IntegerField(primary_key=True) | |
| type = models.ForeignKey("Cvterm", null=True, blank=True) | |
| subject = models.ForeignKey("Cvterm", related_name="%(class)s_subject" ) | |
| object = models.ForeignKey("Cvterm", related_name="%(class)s_object" ) | |
| cv = models.ForeignKey("Cv", related_name="%(class)s_cv" ) | |
| pathdistance = models.IntegerField(null=True, blank=True) | |
| class Meta: | |
| db_table = u'cvtermpath' | |
| class CvRoot(models.Model): | |
| cv_id = models.IntegerField(null=True, blank=True) | |
| root_cvterm_id = models.IntegerField(null=True, blank=True) | |
| class Meta: | |
| db_table = u'cv_root' | |
| class Cvtermprop(models.Model): | |
| cvtermprop_id = models.IntegerField(primary_key=True) | |
| cvterm = models.ForeignKey("Cvterm", related_name="%(class)s_cvterm" ) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| value = models.TextField() | |
| rank = models.IntegerField() | |
| class Meta: | |
| db_table = u'cvtermprop' | |
| class CvLeaf(models.Model): | |
| cv_id = models.IntegerField(null=True, blank=True) | |
| cvterm_id = models.IntegerField(null=True, blank=True) | |
| class Meta: | |
| db_table = u'cv_leaf' | |
| class Dbxrefprop(models.Model): | |
| dbxrefprop_id = models.IntegerField(primary_key=True) | |
| dbxref = models.ForeignKey("Dbxref", related_name="%(class)s_dbxref" ) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| value = models.TextField() | |
| rank = models.IntegerField() | |
| class Meta: | |
| db_table = u'dbxrefprop' | |
| class CommonAncestorCvterm(models.Model): | |
| cvterm1_id = models.IntegerField(null=True, blank=True) | |
| cvterm2_id = models.IntegerField(null=True, blank=True) | |
| ancestor_cvterm_id = models.IntegerField(null=True, blank=True) | |
| pathdistance1 = models.IntegerField(null=True, blank=True) | |
| pathdistance2 = models.IntegerField(null=True, blank=True) | |
| total_pathdistance = models.IntegerField(null=True, blank=True) | |
| class Meta: | |
| db_table = u'common_ancestor_cvterm' | |
| class CommonDescendantCvterm(models.Model): | |
| cvterm1_id = models.IntegerField(null=True, blank=True) | |
| cvterm2_id = models.IntegerField(null=True, blank=True) | |
| ancestor_cvterm_id = models.IntegerField(null=True, blank=True) | |
| pathdistance1 = models.IntegerField(null=True, blank=True) | |
| pathdistance2 = models.IntegerField(null=True, blank=True) | |
| total_pathdistance = models.IntegerField(null=True, blank=True) | |
| class Meta: | |
| db_table = u'common_descendant_cvterm' | |
| class StatsPathsToRoot(models.Model): | |
| cvterm_id = models.IntegerField(null=True, blank=True) | |
| total_paths = models.BigIntegerField(null=True, blank=True) | |
| avg_distance = models.DecimalField(null=True, max_digits=65535, decimal_places=65535, blank=True) | |
| min_distance = models.IntegerField(null=True, blank=True) | |
| max_distance = models.IntegerField(null=True, blank=True) | |
| class Meta: | |
| db_table = u'stats_paths_to_root' | |
| class CvCvtermCount(models.Model): | |
| name = models.CharField(max_length=255, blank=True) | |
| num_terms_excl_obs = models.BigIntegerField(null=True, blank=True) | |
| class Meta: | |
| db_table = u'cv_cvterm_count' | |
| class CvCvtermCountWithObs(models.Model): | |
| name = models.CharField(max_length=255, blank=True) | |
| num_terms_incl_obs = models.BigIntegerField(null=True, blank=True) | |
| class Meta: | |
| db_table = u'cv_cvterm_count_with_obs' | |
| class CvLinkCount(models.Model): | |
| cv_name = models.CharField(max_length=255, blank=True) | |
| relation_name = models.CharField(max_length=1024, blank=True) | |
| relation_cv_name = models.CharField(max_length=255, blank=True) | |
| num_links = models.BigIntegerField(null=True, blank=True) | |
| class Meta: | |
| db_table = u'cv_link_count' | |
| class CvPathCount(models.Model): | |
| cv_name = models.CharField(max_length=255, blank=True) | |
| relation_name = models.CharField(max_length=1024, blank=True) | |
| relation_cv_name = models.CharField(max_length=255, blank=True) | |
| num_paths = models.BigIntegerField(null=True, blank=True) | |
| class Meta: | |
| db_table = u'cv_path_count' | |
| class PubDbxref(models.Model): | |
| pub_dbxref_id = models.IntegerField(primary_key=True) | |
| pub = models.ForeignKey("Pub", related_name="%(class)s_pub" ) | |
| dbxref = models.ForeignKey("Dbxref", related_name="%(class)s_dbxref" ) | |
| is_current = models.BooleanField() | |
| class Meta: | |
| db_table = u'pub_dbxref' | |
| class PubRelationship(models.Model): | |
| pub_relationship_id = models.IntegerField(primary_key=True) | |
| subject = models.ForeignKey("Pub", related_name="%(class)s_subject" ) | |
| object = models.ForeignKey("Pub", related_name="%(class)s_object" ) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| class Meta: | |
| db_table = u'pub_relationship' | |
| class Pubauthor(models.Model): | |
| pubauthor_id = models.IntegerField(primary_key=True) | |
| pub = models.ForeignKey("Pub", related_name="%(class)s_pub" ) | |
| rank = models.IntegerField() | |
| editor = models.NullBooleanField(null=True, blank=True) | |
| surname = models.CharField(max_length=100) | |
| givennames = models.CharField(max_length=100, blank=True) | |
| suffix = models.CharField(max_length=100, blank=True) | |
| class Meta: | |
| db_table = u'pubauthor' | |
| class Pubprop(models.Model): | |
| pubprop_id = models.IntegerField(primary_key=True) | |
| pub = models.ForeignKey("Pub", related_name="%(class)s_pub" ) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| value = models.TextField() | |
| rank = models.IntegerField(null=True, blank=True) | |
| class Meta: | |
| db_table = u'pubprop' | |
| class OrganismDbxref(models.Model): | |
| organism_dbxref_id = models.IntegerField(primary_key=True) | |
| organism = models.ForeignKey("Organism", related_name="%(class)s_organism" ) | |
| dbxref = models.ForeignKey("Dbxref", related_name="%(class)s_dbxref" ) | |
| class Meta: | |
| db_table = u'organism_dbxref' | |
| class Organismprop(models.Model): | |
| organismprop_id = models.IntegerField(primary_key=True) | |
| organism = models.ForeignKey("Organism", related_name="%(class)s_organism" ) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| value = models.TextField(blank=True) | |
| rank = models.IntegerField() | |
| class Meta: | |
| db_table = u'organismprop' | |
| class Featureloc(models.Model): | |
| featureloc_id = models.IntegerField(primary_key=True) | |
| feature = models.ForeignKey("Feature", related_name="%(class)s_feature" ) | |
| srcfeature = models.ForeignKey("Feature", null=True, blank=True) | |
| fmin = models.IntegerField(null=True, blank=True) | |
| is_fmin_partial = models.BooleanField() | |
| fmax = models.IntegerField(null=True, blank=True) | |
| is_fmax_partial = models.BooleanField() | |
| strand = models.SmallIntegerField(null=True, blank=True) | |
| phase = models.IntegerField(null=True, blank=True) | |
| residue_info = models.TextField(blank=True) | |
| locgroup = models.IntegerField() | |
| rank = models.IntegerField() | |
| class Meta: | |
| db_table = u'featureloc' | |
| class Organism(models.Model): | |
| organism_id = models.IntegerField(primary_key=True) | |
| abbreviation = models.CharField(max_length=255, blank=True) | |
| genus = models.CharField(max_length=255) | |
| species = models.CharField(max_length=255) | |
| common_name = models.CharField(max_length=255, blank=True) | |
| comment = models.TextField(blank=True) | |
| class Meta: | |
| db_table = u'organism' | |
| class FeaturelocPub(models.Model): | |
| featureloc_pub_id = models.IntegerField(primary_key=True) | |
| featureloc = models.ForeignKey("Featureloc", related_name="%(class)s_featureloc" ) | |
| pub = models.ForeignKey("Pub", related_name="%(class)s_pub" ) | |
| class Meta: | |
| db_table = u'featureloc_pub' | |
| class FeaturePub(models.Model): | |
| feature_pub_id = models.IntegerField(primary_key=True) | |
| feature = models.ForeignKey("Feature", related_name="%(class)s_feature" ) | |
| pub = models.ForeignKey("Pub", related_name="%(class)s_pub" ) | |
| class Meta: | |
| db_table = u'feature_pub' | |
| class FeaturePubprop(models.Model): | |
| feature_pubprop_id = models.IntegerField(primary_key=True) | |
| feature_pub = models.ForeignKey("FeaturePub", related_name="%(class)s_pub" ) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| value = models.TextField(blank=True) | |
| rank = models.IntegerField() | |
| class Meta: | |
| db_table = u'feature_pubprop' | |
| class FeatureDbxref(models.Model): | |
| feature_dbxref_id = models.IntegerField(primary_key=True) | |
| feature = models.ForeignKey("Feature", related_name="%(class)s_feature" ) | |
| dbxref = models.ForeignKey("Dbxref", related_name="%(class)s_dbxref" ) | |
| is_current = models.BooleanField() | |
| class Meta: | |
| db_table = u'feature_dbxref' | |
| class Featureprop(models.Model): | |
| featureprop_id = models.IntegerField(primary_key=True) | |
| feature = models.ForeignKey("Feature", related_name="%(class)s_feature" ) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| value = models.TextField(blank=True) | |
| rank = models.IntegerField() | |
| class Meta: | |
| db_table = u'featureprop' | |
| class FeaturepropPub(models.Model): | |
| featureprop_pub_id = models.IntegerField(primary_key=True) | |
| featureprop = models.ForeignKey("Featureprop", related_name="%(class)s_featureprop" ) | |
| pub = models.ForeignKey("Pub", related_name="%(class)s_pub" ) | |
| class Meta: | |
| db_table = u'featureprop_pub' | |
| class FeatureRelationship(models.Model): | |
| feature_relationship_id = models.IntegerField(primary_key=True) | |
| subject = models.ForeignKey("Feature", related_name="%(class)s_subject" ) | |
| object = models.ForeignKey("Feature", related_name="%(class)s_object" ) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| value = models.TextField(blank=True) | |
| rank = models.IntegerField() | |
| class Meta: | |
| db_table = u'feature_relationship' | |
| class FeatureRelationshipPub(models.Model): | |
| feature_relationship_pub_id = models.IntegerField(primary_key=True) | |
| feature_relationship = models.ForeignKey("FeatureRelationship", related_name="%(class)s_relationship" ) | |
| pub = models.ForeignKey("Pub", related_name="%(class)s_pub" ) | |
| class Meta: | |
| db_table = u'feature_relationship_pub' | |
| class FeatureRelationshipprop(models.Model): | |
| feature_relationshipprop_id = models.IntegerField(primary_key=True) | |
| feature_relationship = models.ForeignKey("FeatureRelationship", related_name="%(class)s_relationship" ) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| value = models.TextField(blank=True) | |
| rank = models.IntegerField() | |
| class Meta: | |
| db_table = u'feature_relationshipprop' | |
| class FeatureRelationshippropPub(models.Model): | |
| feature_relationshipprop_pub_id = models.IntegerField(primary_key=True) | |
| feature_relationshipprop = models.ForeignKey("FeatureRelationshipprop", related_name="%(class)s_relationshipprop" ) | |
| pub = models.ForeignKey("Pub", related_name="%(class)s_pub" ) | |
| class Meta: | |
| db_table = u'feature_relationshipprop_pub' | |
| class FeatureCvtermprop(models.Model): | |
| feature_cvtermprop_id = models.IntegerField(primary_key=True) | |
| feature_cvterm = models.ForeignKey("FeatureCvterm", related_name="%(class)s_cvterm" ) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| value = models.TextField(blank=True) | |
| rank = models.IntegerField() | |
| class Meta: | |
| db_table = u'feature_cvtermprop' | |
| class FeatureCvtermDbxref(models.Model): | |
| feature_cvterm_dbxref_id = models.IntegerField(primary_key=True) | |
| feature_cvterm = models.ForeignKey("FeatureCvterm", related_name="%(class)s_cvterm" ) | |
| dbxref = models.ForeignKey("Dbxref", related_name="%(class)s_dbxref" ) | |
| class Meta: | |
| db_table = u'feature_cvterm_dbxref' | |
| class FeatureCvterm(models.Model): | |
| feature_cvterm_id = models.IntegerField(primary_key=True) | |
| feature = models.ForeignKey("Feature", related_name="%(class)s_feature" ) | |
| cvterm = models.ForeignKey("Cvterm", related_name="%(class)s_cvterm" ) | |
| pub = models.ForeignKey("Pub", related_name="%(class)s_pub" ) | |
| is_not = models.BooleanField() | |
| rank = models.IntegerField() | |
| class Meta: | |
| db_table = u'feature_cvterm' | |
| class FeatureCvtermPub(models.Model): | |
| feature_cvterm_pub_id = models.IntegerField(primary_key=True) | |
| feature_cvterm = models.ForeignKey("FeatureCvterm", related_name="%(class)s_cvterm" ) | |
| pub = models.ForeignKey("Pub", related_name="%(class)s_pub" ) | |
| class Meta: | |
| db_table = u'feature_cvterm_pub' | |
| class FeatureSynonym(models.Model): | |
| feature_synonym_id = models.IntegerField(primary_key=True) | |
| synonym = models.ForeignKey("Synonym", related_name="%(class)s_synonym" ) | |
| feature = models.ForeignKey("Feature", related_name="%(class)s_feature" ) | |
| pub = models.ForeignKey("Pub", related_name="%(class)s_pub" ) | |
| is_current = models.BooleanField() | |
| is_internal = models.BooleanField() | |
| class Meta: | |
| db_table = u'feature_synonym' | |
| class TypeFeatureCount(models.Model): | |
| type = models.CharField(max_length=1024, blank=True) | |
| num_features = models.BigIntegerField(null=True, blank=True) | |
| class Meta: | |
| db_table = u'type_feature_count' | |
| class ProteinCodingGene(models.Model): | |
| feature_id = models.IntegerField(null=True, blank=True) | |
| dbxref_id = models.IntegerField(null=True, blank=True) | |
| organism_id = models.IntegerField(null=True, blank=True) | |
| name = models.CharField(max_length=255, blank=True) | |
| uniquename = models.TextField(blank=True) | |
| residues = models.TextField(blank=True) | |
| seqlen = models.IntegerField(null=True, blank=True) | |
| md5checksum = models.CharField(max_length=32, blank=True) | |
| type_id = models.IntegerField(null=True, blank=True) | |
| is_analysis = models.NullBooleanField(null=True, blank=True) | |
| is_obsolete = models.NullBooleanField(null=True, blank=True) | |
| timeaccessioned = models.DateTimeField(null=True, blank=True) | |
| timelastmodified = models.DateTimeField(null=True, blank=True) | |
| class Meta: | |
| db_table = u'protein_coding_gene' | |
| class IntronCombinedView(models.Model): | |
| exon1_id = models.IntegerField(null=True, blank=True) | |
| exon2_id = models.IntegerField(null=True, blank=True) | |
| fmin = models.IntegerField(null=True, blank=True) | |
| fmax = models.IntegerField(null=True, blank=True) | |
| strand = models.SmallIntegerField(null=True, blank=True) | |
| srcfeature_id = models.IntegerField(null=True, blank=True) | |
| intron_rank = models.IntegerField(null=True, blank=True) | |
| transcript_id = models.IntegerField(null=True, blank=True) | |
| class Meta: | |
| db_table = u'intron_combined_view' | |
| class IntronlocView(models.Model): | |
| exon1_id = models.IntegerField(null=True, blank=True) | |
| exon2_id = models.IntegerField(null=True, blank=True) | |
| fmin = models.IntegerField(null=True, blank=True) | |
| fmax = models.IntegerField(null=True, blank=True) | |
| strand = models.SmallIntegerField(null=True, blank=True) | |
| srcfeature_id = models.IntegerField(null=True, blank=True) | |
| class Meta: | |
| db_table = u'intronloc_view' | |
| class Feature(models.Model): | |
| feature_id = models.IntegerField(primary_key=True) | |
| dbxref = models.ForeignKey("Dbxref", null=True, blank=True) | |
| organism = models.ForeignKey("Organism", related_name="%(class)s_organism" ) | |
| name = models.CharField(max_length=255, blank=True) | |
| uniquename = models.TextField() | |
| residues = models.TextField(blank=True) | |
| seqlen = models.IntegerField(null=True, blank=True) | |
| md5checksum = models.CharField(max_length=32, blank=True) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| is_analysis = models.BooleanField() | |
| is_obsolete = models.BooleanField() | |
| timeaccessioned = models.DateTimeField() | |
| timelastmodified = models.DateTimeField() | |
| class Meta: | |
| db_table = u'feature' | |
| class Analysisprop(models.Model): | |
| analysisprop_id = models.IntegerField(primary_key=True) | |
| analysis = models.ForeignKey("Analysis", related_name="%(class)s_analysis" ) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| value = models.TextField(blank=True) | |
| rank = models.IntegerField() | |
| class Meta: | |
| db_table = u'analysisprop' | |
| class Analysisfeature(models.Model): | |
| analysisfeature_id = models.IntegerField(primary_key=True) | |
| feature = models.ForeignKey("Feature", related_name="%(class)s_feature" ) | |
| analysis = models.ForeignKey("Analysis", related_name="%(class)s_analysis" ) | |
| rawscore = models.FloatField(null=True, blank=True) | |
| normscore = models.FloatField(null=True, blank=True) | |
| significance = models.FloatField(null=True, blank=True) | |
| identity = models.FloatField(null=True, blank=True) | |
| class Meta: | |
| db_table = u'analysisfeature' | |
| class Analysis(models.Model): | |
| analysis_id = models.IntegerField(primary_key=True) | |
| name = models.CharField(max_length=255, blank=True) | |
| description = models.TextField(blank=True) | |
| program = models.CharField(max_length=255) | |
| programversion = models.CharField(max_length=255) | |
| algorithm = models.CharField(max_length=255, blank=True) | |
| sourcename = models.CharField(max_length=255, blank=True) | |
| sourceversion = models.CharField(max_length=255, blank=True) | |
| sourceuri = models.TextField(blank=True) | |
| timeexecuted = models.DateTimeField() | |
| class Meta: | |
| db_table = u'analysis' | |
| class Analysisfeatureprop(models.Model): | |
| analysisfeatureprop_id = models.IntegerField(primary_key=True) | |
| analysisfeature = models.ForeignKey("Analysisfeature", related_name="%(class)s_analysisfeature" ) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| value = models.TextField(blank=True) | |
| rank = models.IntegerField() | |
| class Meta: | |
| db_table = u'analysisfeatureprop' | |
| class Genotype(models.Model): | |
| genotype_id = models.IntegerField(primary_key=True) | |
| name = models.TextField(blank=True) | |
| uniquename = models.TextField(unique=True) | |
| description = models.CharField(max_length=255, blank=True) | |
| class Meta: | |
| db_table = u'genotype' | |
| class PhenotypeCvterm(models.Model): | |
| phenotype_cvterm_id = models.IntegerField(primary_key=True) | |
| phenotype = models.ForeignKey("Phenotype", related_name="%(class)s_phenotype" ) | |
| cvterm = models.ForeignKey("Cvterm", related_name="%(class)s_cvterm" ) | |
| rank = models.IntegerField() | |
| class Meta: | |
| db_table = u'phenotype_cvterm' | |
| class FeaturePhenotype(models.Model): | |
| feature_phenotype_id = models.IntegerField(primary_key=True) | |
| feature = models.ForeignKey("Feature", related_name="%(class)s_feature" ) | |
| phenotype = models.ForeignKey("Phenotype", related_name="%(class)s_phenotype" ) | |
| class Meta: | |
| db_table = u'feature_phenotype' | |
| class FeatureGenotype(models.Model): | |
| feature_genotype_id = models.IntegerField(primary_key=True) | |
| feature = models.ForeignKey("Feature", related_name="%(class)s_feature" ) | |
| genotype = models.ForeignKey("Genotype", related_name="%(class)s_genotype" ) | |
| chromosome = models.ForeignKey("Feature", null=True, blank=True) | |
| rank = models.IntegerField() | |
| cgroup = models.IntegerField() | |
| cvterm = models.ForeignKey("Cvterm", related_name="%(class)s_cvterm" ) | |
| class Meta: | |
| db_table = u'feature_genotype' | |
| class Environment(models.Model): | |
| environment_id = models.IntegerField(primary_key=True) | |
| uniquename = models.TextField(unique=True) | |
| description = models.TextField(blank=True) | |
| class Meta: | |
| db_table = u'environment' | |
| class EnvironmentCvterm(models.Model): | |
| environment_cvterm_id = models.IntegerField(primary_key=True) | |
| environment = models.ForeignKey("Environment", related_name="%(class)s_environment" ) | |
| cvterm = models.ForeignKey("Cvterm", related_name="%(class)s_cvterm" ) | |
| class Meta: | |
| db_table = u'environment_cvterm' | |
| class Phenstatement(models.Model): | |
| phenstatement_id = models.IntegerField(primary_key=True) | |
| genotype = models.ForeignKey("Genotype", related_name="%(class)s_genotype" ) | |
| environment = models.ForeignKey("Environment", related_name="%(class)s_environment" ) | |
| phenotype = models.ForeignKey("Phenotype", related_name="%(class)s_phenotype" ) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| pub = models.ForeignKey("Pub", related_name="%(class)s_pub" ) | |
| class Meta: | |
| db_table = u'phenstatement' | |
| class PhenotypeComparison(models.Model): | |
| phenotype_comparison_id = models.IntegerField(primary_key=True) | |
| genotype1 = models.ForeignKey("Genotype", related_name="%(class)s_genotype1" ) | |
| environment1 = models.ForeignKey("Environment", related_name="%(class)s_environment1" ) | |
| genotype2 = models.ForeignKey("Genotype", related_name="%(class)s_genotype2" ) | |
| environment2 = models.ForeignKey("Environment", related_name="%(class)s_environment2" ) | |
| phenotype1 = models.ForeignKey("Phenotype", related_name="%(class)s_phenotype1" ) | |
| phenotype2 = models.ForeignKey("Phenotype", null=True, blank=True) | |
| pub = models.ForeignKey("Pub", related_name="%(class)s_pub" ) | |
| organism = models.ForeignKey("Organism", related_name="%(class)s_organism" ) | |
| class Meta: | |
| db_table = u'phenotype_comparison' | |
| class Phenotype(models.Model): | |
| phenotype_id = models.IntegerField(primary_key=True) | |
| uniquename = models.TextField(unique=True) | |
| observable = models.ForeignKey("Cvterm", related_name="%(class)s_observable", null=True, blank=True) | |
| attr = models.ForeignKey("Cvterm", related_name="%(class)s_attr", null=True, blank=True) | |
| value = models.TextField(blank=True) | |
| cvalue = models.ForeignKey("Cvterm",related_name="%(class)s_cvalue", null=True, blank=True) | |
| assay = models.ForeignKey("Cvterm",related_name="%(class)s_assay", null=True, blank=True) | |
| class Meta: | |
| db_table = u'phenotype' | |
| class Phendesc(models.Model): | |
| phendesc_id = models.IntegerField(primary_key=True) | |
| genotype = models.ForeignKey("Genotype", related_name="%(class)s_genotype" ) | |
| environment = models.ForeignKey("Environment", related_name="%(class)s_environment" ) | |
| description = models.TextField() | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| pub = models.ForeignKey("Pub", related_name="%(class)s_pub" ) | |
| class Meta: | |
| db_table = u'phendesc' | |
| class SouthMigrationhistory(models.Model): | |
| id = models.IntegerField(primary_key=True) | |
| app_name = models.CharField(max_length=255) | |
| migration = models.CharField(max_length=255) | |
| applied = models.DateTimeField() | |
| class Meta: | |
| db_table = u'south_migrationhistory' | |
| class PhenotypeComparisonCvterm(models.Model): | |
| phenotype_comparison_cvterm_id = models.IntegerField(primary_key=True) | |
| phenotype_comparison = models.ForeignKey("PhenotypeComparison", related_name="%(class)s_comparison" ) | |
| cvterm = models.ForeignKey("Cvterm", related_name="%(class)s_cvterm" ) | |
| pub = models.ForeignKey("Pub", related_name="%(class)s_pub" ) | |
| rank = models.IntegerField() | |
| class Meta: | |
| db_table = u'phenotype_comparison_cvterm' | |
| class Cvterm(models.Model): | |
| cvterm_id = models.IntegerField(primary_key=True) | |
| cv = models.ForeignKey("Cv", related_name="%(class)s_cv" ) | |
| name = models.CharField(max_length=1024) | |
| definition = models.TextField(blank=True) | |
| dbxref = models.ForeignKey("Dbxref", unique=True) | |
| is_obsolete = models.IntegerField() | |
| is_relationshiptype = models.IntegerField() | |
| class Meta: | |
| db_table = u'cvterm' | |
| class Featuremap(models.Model): | |
| featuremap_id = models.IntegerField(primary_key=True) | |
| name = models.CharField(max_length=255, unique=True, blank=True) | |
| description = models.TextField(blank=True) | |
| unittype = models.ForeignKey("Cvterm", null=True, blank=True) | |
| class Meta: | |
| db_table = u'featuremap' | |
| class Pub(models.Model): | |
| pub_id = models.IntegerField(primary_key=True) | |
| title = models.TextField(blank=True) | |
| volumetitle = models.TextField(blank=True) | |
| volume = models.CharField(max_length=255, blank=True) | |
| series_name = models.CharField(max_length=255, blank=True) | |
| issue = models.CharField(max_length=255, blank=True) | |
| pyear = models.CharField(max_length=255, blank=True) | |
| pages = models.CharField(max_length=255, blank=True) | |
| miniref = models.CharField(max_length=255, blank=True) | |
| uniquename = models.TextField(unique=True) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| is_obsolete = models.NullBooleanField(null=True, blank=True) | |
| publisher = models.CharField(max_length=255, blank=True) | |
| pubplace = models.CharField(max_length=255, blank=True) | |
| class Meta: | |
| db_table = u'pub' | |
| class Featurerange(models.Model): | |
| featurerange_id = models.IntegerField(primary_key=True) | |
| featuremap = models.ForeignKey("Featuremap", related_name="%(class)s_featuremap" ) | |
| feature = models.ForeignKey("Feature", related_name="%(class)s_feature" ) | |
| leftstartf = models.ForeignKey("Feature", related_name="%(class)s_leftstartf" ) | |
| leftendf = models.ForeignKey("Feature", related_name="%(class)s_leftendf", null=True, blank=True) | |
| rightstartf = models.ForeignKey("Feature", related_name="%(class)s_rightstartf" , null=True, blank=True) | |
| rightendf = models.ForeignKey("Feature", related_name="%(class)s_rightendf" ) | |
| rangestr = models.CharField(max_length=255, blank=True) | |
| class Meta: | |
| db_table = u'featurerange' | |
| class Featurepos(models.Model): | |
| featurepos_id = models.IntegerField(primary_key=True) | |
| featuremap = models.ForeignKey("Featuremap", related_name="%(class)s_featuremap" ) | |
| feature = models.ForeignKey("Feature", related_name="%(class)s_feature" ) | |
| map_feature = models.ForeignKey("Feature", related_name="%(class)s_map_feature" ) | |
| mappos = models.FloatField() | |
| class Meta: | |
| db_table = u'featurepos' | |
| class FeaturemapPub(models.Model): | |
| featuremap_pub_id = models.IntegerField(primary_key=True) | |
| featuremap = models.ForeignKey("Featuremap", related_name="%(class)s_featuremap" ) | |
| pub = models.ForeignKey("Pub", related_name="%(class)s_pub" ) | |
| class Meta: | |
| db_table = u'featuremap_pub' | |
| class PhylotreePub(models.Model): | |
| phylotree_pub_id = models.IntegerField(primary_key=True) | |
| phylotree = models.ForeignKey("Phylotree", related_name="%(class)s_phylotree" ) | |
| pub = models.ForeignKey("Pub", related_name="%(class)s_pub" ) | |
| class Meta: | |
| db_table = u'phylotree_pub' | |
| class PhylonodeDbxref(models.Model): | |
| phylonode_dbxref_id = models.IntegerField(primary_key=True) | |
| phylonode = models.ForeignKey("Phylonode", related_name="%(class)s_phylonode" ) | |
| dbxref = models.ForeignKey("Dbxref", related_name="%(class)s_dbxref" ) | |
| class Meta: | |
| db_table = u'phylonode_dbxref' | |
| class PhylonodePub(models.Model): | |
| phylonode_pub_id = models.IntegerField(primary_key=True) | |
| phylonode = models.ForeignKey("Phylonode", related_name="%(class)s_phylonode" ) | |
| pub = models.ForeignKey("Pub", related_name="%(class)s_pub" ) | |
| class Meta: | |
| db_table = u'phylonode_pub' | |
| class PhylonodeOrganism(models.Model): | |
| phylonode_organism_id = models.IntegerField(primary_key=True) | |
| phylonode = models.ForeignKey("Phylonode", unique=True) | |
| organism = models.ForeignKey("Organism", related_name="%(class)s_organism" ) | |
| class Meta: | |
| db_table = u'phylonode_organism' | |
| class Phylonodeprop(models.Model): | |
| phylonodeprop_id = models.IntegerField(primary_key=True) | |
| phylonode = models.ForeignKey("Phylonode", related_name="%(class)s_phylonode" ) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| value = models.TextField() | |
| rank = models.IntegerField() | |
| class Meta: | |
| db_table = u'phylonodeprop' | |
| class Phylonode(models.Model): | |
| phylonode_id = models.IntegerField(primary_key=True) | |
| phylotree = models.ForeignKey("Phylotree", related_name="%(class)s_phylotree" ) | |
| parent_phylonode = models.ForeignKey('self', null=True, blank=True) | |
| left_idx = models.IntegerField() | |
| right_idx = models.IntegerField() | |
| type = models.ForeignKey("Cvterm", null=True, blank=True) | |
| feature = models.ForeignKey("Feature", null=True, blank=True) | |
| label = models.CharField(max_length=255, blank=True) | |
| distance = models.FloatField(null=True, blank=True) | |
| class Meta: | |
| db_table = u'phylonode' | |
| class Phylotree(models.Model): | |
| phylotree_id = models.IntegerField(primary_key=True) | |
| dbxref = models.ForeignKey("Dbxref", related_name="%(class)s_dbxref" ) | |
| name = models.CharField(max_length=255, blank=True) | |
| type = models.ForeignKey("Cvterm", null=True, blank=True) | |
| analysis = models.ForeignKey("Analysis", null=True, blank=True) | |
| comment = models.TextField(blank=True) | |
| class Meta: | |
| db_table = u'phylotree' | |
| class PhylonodeRelationship(models.Model): | |
| phylonode_relationship_id = models.IntegerField(primary_key=True) | |
| subject = models.ForeignKey("phylonode", related_name="%(class)s_subject" ) | |
| object = models.ForeignKey("phylonode", related_name="%(class)s_object" ) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| rank = models.IntegerField(null=True, blank=True) | |
| phylotree = models.ForeignKey("phylotree", related_name="%(class)s_phylotree" ) | |
| class Meta: | |
| db_table = u'phylonode_relationship' | |
| class Contact(models.Model): | |
| contact_id = models.IntegerField(primary_key=True) | |
| type = models.ForeignKey("Cvterm", null=True, blank=True) | |
| name = models.CharField(max_length=255, unique=True) | |
| description = models.CharField(max_length=255, blank=True) | |
| class Meta: | |
| db_table = u'contact' | |
| class ContactRelationship(models.Model): | |
| contact_relationship_id = models.IntegerField(primary_key=True) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| subject = models.ForeignKey("Contact", related_name="%(class)s_subject" ) | |
| object = models.ForeignKey("Contact", related_name="%(class)s_object" ) | |
| class Meta: | |
| db_table = u'contact_relationship' | |
| class ExpressionPub(models.Model): | |
| expression_pub_id = models.IntegerField(primary_key=True) | |
| expression = models.ForeignKey("Expression", related_name="%(class)s_expression" ) | |
| pub = models.ForeignKey("Pub", related_name="%(class)s_pub" ) | |
| class Meta: | |
| db_table = u'expression_pub' | |
| class ExpressionCvterm(models.Model): | |
| expression_cvterm_id = models.IntegerField(primary_key=True) | |
| expression = models.ForeignKey("Expression", related_name="%(class)s_expression" ) | |
| cvterm = models.ForeignKey("Cvterm", related_name="%(class)s_cvterm" ) | |
| rank = models.IntegerField() | |
| cvterm_type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| class Meta: | |
| db_table = u'expression_cvterm' | |
| class ExpressionCvtermprop(models.Model): | |
| expression_cvtermprop_id = models.IntegerField(primary_key=True) | |
| expression_cvterm = models.ForeignKey("ExpressionCvterm", related_name="%(class)s_cvterm" ) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| value = models.TextField(blank=True) | |
| rank = models.IntegerField() | |
| class Meta: | |
| db_table = u'expression_cvtermprop' | |
| class Expressionprop(models.Model): | |
| expressionprop_id = models.IntegerField(primary_key=True) | |
| expression = models.ForeignKey("Expression", related_name="%(class)s_expression" ) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| value = models.TextField(blank=True) | |
| rank = models.IntegerField() | |
| class Meta: | |
| db_table = u'expressionprop' | |
| class FeatureExpression(models.Model): | |
| feature_expression_id = models.IntegerField(primary_key=True) | |
| expression = models.ForeignKey("Expression", related_name="%(class)s_expression" ) | |
| feature = models.ForeignKey("Feature", related_name="%(class)s_feature" ) | |
| pub = models.ForeignKey("Pub", related_name="%(class)s_pub" ) | |
| class Meta: | |
| db_table = u'feature_expression' | |
| class FeatureExpressionprop(models.Model): | |
| feature_expressionprop_id = models.IntegerField(primary_key=True) | |
| feature_expression = models.ForeignKey("FeatureExpression", related_name="%(class)s_expression" ) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| value = models.TextField(blank=True) | |
| rank = models.IntegerField() | |
| class Meta: | |
| db_table = u'feature_expressionprop' | |
| class Expression(models.Model): | |
| expression_id = models.IntegerField(primary_key=True) | |
| uniquename = models.TextField(unique=True) | |
| md5checksum = models.CharField(max_length=32, blank=True) | |
| description = models.TextField(blank=True) | |
| class Meta: | |
| db_table = u'expression' | |
| class Eimage(models.Model): | |
| eimage_id = models.IntegerField(primary_key=True) | |
| eimage_data = models.TextField(blank=True) | |
| eimage_type = models.CharField(max_length=255) | |
| image_uri = models.CharField(max_length=255, blank=True) | |
| class Meta: | |
| db_table = u'eimage' | |
| class ExpressionImage(models.Model): | |
| expression_image_id = models.IntegerField(primary_key=True) | |
| expression = models.ForeignKey("Expression", related_name="%(class)s_expression" ) | |
| eimage = models.ForeignKey("Eimage", related_name="%(class)s_eimage" ) | |
| class Meta: | |
| db_table = u'expression_image' | |
| class Mageml(models.Model): | |
| mageml_id = models.IntegerField(primary_key=True) | |
| mage_package = models.TextField() | |
| mage_ml = models.TextField() | |
| class Meta: | |
| db_table = u'mageml' | |
| class Magedocumentation(models.Model): | |
| magedocumentation_id = models.IntegerField(primary_key=True) | |
| mageml = models.ForeignKey("Mageml", related_name="%(class)s_mageml" ) | |
| tableinfo = models.ForeignKey("Tableinfo", related_name="%(class)s_tableinfo" ) | |
| row_id = models.IntegerField() | |
| mageidentifier = models.TextField() | |
| class Meta: | |
| db_table = u'magedocumentation' | |
| class Channel(models.Model): | |
| channel_id = models.IntegerField(primary_key=True) | |
| name = models.TextField(unique=True) | |
| definition = models.TextField() | |
| class Meta: | |
| db_table = u'channel' | |
| class Protocolparam(models.Model): | |
| protocolparam_id = models.IntegerField(primary_key=True) | |
| protocol = models.ForeignKey("Protocol", related_name="%(class)s_protocol" ) | |
| name = models.TextField() | |
| datatype = models.ForeignKey("Cvterm", related_name="%(class)s_datatype", null=True, blank=True) | |
| unittype = models.ForeignKey("Cvterm", related_name="%(class)s_unittype", null=True, blank=True) | |
| value = models.TextField(blank=True) | |
| rank = models.IntegerField() | |
| class Meta: | |
| db_table = u'protocolparam' | |
| class Tableinfo(models.Model): | |
| tableinfo_id = models.IntegerField(primary_key=True) | |
| name = models.CharField(max_length=30, unique=True) | |
| primary_key_column = models.CharField(max_length=30, blank=True) | |
| is_view = models.IntegerField() | |
| view_on_table_id = models.IntegerField(null=True, blank=True) | |
| superclass_table_id = models.IntegerField(null=True, blank=True) | |
| is_updateable = models.IntegerField() | |
| modification_date = models.DateField() | |
| class Meta: | |
| db_table = u'tableinfo' | |
| class Arraydesign(models.Model): | |
| arraydesign_id = models.IntegerField(primary_key=True) | |
| manufacturer = models.ForeignKey("Contact", related_name="%(class)s_manufacturer" ) | |
| platformtype = models.ForeignKey("Cvterm", related_name="%(class)s_platformtype" ) | |
| substratetype = models.ForeignKey("Cvterm", null=True, blank=True) | |
| protocol = models.ForeignKey("Protocol", null=True, blank=True) | |
| dbxref = models.ForeignKey("Dbxref", null=True, blank=True) | |
| name = models.TextField(unique=True) | |
| version = models.TextField(blank=True) | |
| description = models.TextField(blank=True) | |
| array_dimensions = models.TextField(blank=True) | |
| element_dimensions = models.TextField(blank=True) | |
| num_of_elements = models.IntegerField(null=True, blank=True) | |
| num_array_columns = models.IntegerField(null=True, blank=True) | |
| num_array_rows = models.IntegerField(null=True, blank=True) | |
| num_grid_columns = models.IntegerField(null=True, blank=True) | |
| num_grid_rows = models.IntegerField(null=True, blank=True) | |
| num_sub_columns = models.IntegerField(null=True, blank=True) | |
| num_sub_rows = models.IntegerField(null=True, blank=True) | |
| class Meta: | |
| db_table = u'arraydesign' | |
| class Assayprop(models.Model): | |
| assayprop_id = models.IntegerField(primary_key=True) | |
| assay = models.ForeignKey("Assay", related_name="%(class)s_assay" ) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| value = models.TextField(blank=True) | |
| rank = models.IntegerField() | |
| class Meta: | |
| db_table = u'assayprop' | |
| class Arraydesignprop(models.Model): | |
| arraydesignprop_id = models.IntegerField(primary_key=True) | |
| arraydesign = models.ForeignKey("Arraydesign", related_name="%(class)s_arraydesign" ) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| value = models.TextField(blank=True) | |
| rank = models.IntegerField() | |
| class Meta: | |
| db_table = u'arraydesignprop' | |
| class AssayProject(models.Model): | |
| assay_project_id = models.IntegerField(primary_key=True) | |
| assay = models.ForeignKey("Assay", related_name="%(class)s_assay" ) | |
| project = models.ForeignKey("Project", related_name="%(class)s_project" ) | |
| class Meta: | |
| db_table = u'assay_project' | |
| class Assay(models.Model): | |
| assay_id = models.IntegerField(primary_key=True) | |
| arraydesign = models.ForeignKey("Arraydesign", related_name="%(class)s_arraydesign" ) | |
| protocol = models.ForeignKey("Protocol", null=True, blank=True) | |
| assaydate = models.DateTimeField(null=True, blank=True) | |
| arrayidentifier = models.TextField(blank=True) | |
| arraybatchidentifier = models.TextField(blank=True) | |
| operator = models.ForeignKey("Contact", related_name="%(class)s_operator" ) | |
| dbxref = models.ForeignKey("Dbxref", null=True, blank=True) | |
| name = models.TextField(unique=True, blank=True) | |
| description = models.TextField(blank=True) | |
| class Meta: | |
| db_table = u'assay' | |
| class BiomaterialDbxref(models.Model): | |
| biomaterial_dbxref_id = models.IntegerField(primary_key=True) | |
| biomaterial = models.ForeignKey("Biomaterial", related_name="%(class)s_biomaterial" ) | |
| dbxref = models.ForeignKey("Dbxref", related_name="%(class)s_dbxref" ) | |
| class Meta: | |
| db_table = u'biomaterial_dbxref' | |
| class BiomaterialRelationship(models.Model): | |
| biomaterial_relationship_id = models.IntegerField(primary_key=True) | |
| subject = models.ForeignKey("Biomaterial", related_name="%(class)s_subject" ) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| object = models.ForeignKey("Biomaterial", related_name="%(class)s_object" ) | |
| class Meta: | |
| db_table = u'biomaterial_relationship' | |
| class Biomaterial(models.Model): | |
| biomaterial_id = models.IntegerField(primary_key=True) | |
| taxon = models.ForeignKey("Organism", null=True, blank=True) | |
| biosourceprovider = models.ForeignKey("Contact", null=True, blank=True) | |
| dbxref = models.ForeignKey("Dbxref", null=True, blank=True) | |
| name = models.TextField(unique=True, blank=True) | |
| description = models.TextField(blank=True) | |
| class Meta: | |
| db_table = u'biomaterial' | |
| class Biomaterialprop(models.Model): | |
| biomaterialprop_id = models.IntegerField(primary_key=True) | |
| biomaterial = models.ForeignKey("Biomaterial", related_name="%(class)s_biomaterial" ) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| value = models.TextField(blank=True) | |
| rank = models.IntegerField() | |
| class Meta: | |
| db_table = u'biomaterialprop' | |
| class Treatment(models.Model): | |
| treatment_id = models.IntegerField(primary_key=True) | |
| rank = models.IntegerField() | |
| biomaterial = models.ForeignKey("Biomaterial", related_name="%(class)s_biomaterial" ) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| protocol = models.ForeignKey("Protocol", null=True, blank=True) | |
| name = models.TextField(blank=True) | |
| class Meta: | |
| db_table = u'treatment' | |
| class BiomaterialTreatment(models.Model): | |
| biomaterial_treatment_id = models.IntegerField(primary_key=True) | |
| biomaterial = models.ForeignKey("Biomaterial", related_name="%(class)s_biomaterial" ) | |
| treatment = models.ForeignKey("Treatment", related_name="%(class)s_treatment" ) | |
| unittype = models.ForeignKey("Cvterm", null=True, blank=True) | |
| value = models.FloatField(null=True, blank=True) | |
| rank = models.IntegerField() | |
| class Meta: | |
| db_table = u'biomaterial_treatment' | |
| class Acquisitionprop(models.Model): | |
| acquisitionprop_id = models.IntegerField(primary_key=True) | |
| acquisition = models.ForeignKey("Acquisition", related_name="%(class)s_acquisition" ) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| value = models.TextField(blank=True) | |
| rank = models.IntegerField() | |
| class Meta: | |
| db_table = u'acquisitionprop' | |
| class AssayBiomaterial(models.Model): | |
| assay_biomaterial_id = models.IntegerField(primary_key=True) | |
| assay = models.ForeignKey("Assay", related_name="%(class)s_assay" ) | |
| biomaterial = models.ForeignKey("Biomaterial", related_name="%(class)s_biomaterial" ) | |
| channel = models.ForeignKey("Channel", null=True, blank=True) | |
| rank = models.IntegerField() | |
| class Meta: | |
| db_table = u'assay_biomaterial' | |
| class AcquisitionRelationship(models.Model): | |
| acquisition_relationship_id = models.IntegerField(primary_key=True) | |
| subject = models.ForeignKey("Acquisition", related_name="%(class)s_subject" ) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| object = models.ForeignKey("Acquisition", related_name="%(class)s_object" ) | |
| value = models.TextField(blank=True) | |
| rank = models.IntegerField() | |
| class Meta: | |
| db_table = u'acquisition_relationship' | |
| class Acquisition(models.Model): | |
| acquisition_id = models.IntegerField(primary_key=True) | |
| assay = models.ForeignKey("Assay", related_name="%(class)s_assay" ) | |
| protocol = models.ForeignKey("Protocol", null=True, blank=True) | |
| channel = models.ForeignKey("Channel", null=True, blank=True) | |
| acquisitiondate = models.DateTimeField(null=True, blank=True) | |
| name = models.TextField(unique=True, blank=True) | |
| uri = models.TextField(blank=True) | |
| class Meta: | |
| db_table = u'acquisition' | |
| class Protocol(models.Model): | |
| protocol_id = models.IntegerField(primary_key=True) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| pub = models.ForeignKey("Pub", null=True, blank=True) | |
| dbxref = models.ForeignKey("Dbxref", null=True, blank=True) | |
| name = models.TextField(unique=True) | |
| uri = models.TextField(blank=True) | |
| protocoldescription = models.TextField(blank=True) | |
| hardwaredescription = models.TextField(blank=True) | |
| softwaredescription = models.TextField(blank=True) | |
| class Meta: | |
| db_table = u'protocol' | |
| class Quantificationprop(models.Model): | |
| quantificationprop_id = models.IntegerField(primary_key=True) | |
| quantification = models.ForeignKey("Quantification", related_name="%(class)s_quantification" ) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| value = models.TextField(blank=True) | |
| rank = models.IntegerField() | |
| class Meta: | |
| db_table = u'quantificationprop' | |
| class Control(models.Model): | |
| control_id = models.IntegerField(primary_key=True) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| assay = models.ForeignKey("Assay", related_name="%(class)s_assay" ) | |
| tableinfo = models.ForeignKey("Tableinfo", related_name="%(class)s_tableinfo" ) | |
| row_id = models.IntegerField() | |
| name = models.TextField(blank=True) | |
| value = models.TextField(blank=True) | |
| rank = models.IntegerField() | |
| class Meta: | |
| db_table = u'control' | |
| class QuantificationRelationship(models.Model): | |
| quantification_relationship_id = models.IntegerField(primary_key=True) | |
| subject = models.ForeignKey("Quantification", related_name="%(class)s_subject" ) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| object = models.ForeignKey("Quantification", related_name="%(class)s_object" ) | |
| class Meta: | |
| db_table = u'quantification_relationship' | |
| class Element(models.Model): | |
| element_id = models.IntegerField(primary_key=True) | |
| feature = models.ForeignKey("Feature", null=True, blank=True) | |
| arraydesign = models.ForeignKey("Arraydesign", related_name="%(class)s_arraydesign" ) | |
| type = models.ForeignKey("Cvterm", null=True, blank=True) | |
| dbxref = models.ForeignKey("Dbxref", null=True, blank=True) | |
| class Meta: | |
| db_table = u'element' | |
| class Quantification(models.Model): | |
| quantification_id = models.IntegerField(primary_key=True) | |
| acquisition = models.ForeignKey("Acquisition", related_name="%(class)s_acquisition" ) | |
| operator = models.ForeignKey("Contact", null=True, blank=True) | |
| protocol = models.ForeignKey("Protocol", null=True, blank=True) | |
| analysis = models.ForeignKey("Analysis", related_name="%(class)s_analysis" ) | |
| quantificationdate = models.DateTimeField(null=True, blank=True) | |
| name = models.TextField(blank=True) | |
| uri = models.TextField(blank=True) | |
| class Meta: | |
| db_table = u'quantification' | |
| class ElementRelationship(models.Model): | |
| element_relationship_id = models.IntegerField(primary_key=True) | |
| subject = models.ForeignKey("Element", related_name="%(class)s_subject" ) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| object = models.ForeignKey("Element", related_name="%(class)s_object" ) | |
| value = models.TextField(blank=True) | |
| rank = models.IntegerField() | |
| class Meta: | |
| db_table = u'element_relationship' | |
| class StudyAssay(models.Model): | |
| study_assay_id = models.IntegerField(primary_key=True) | |
| study = models.ForeignKey("Study", related_name="%(class)s_study" ) | |
| assay = models.ForeignKey("Assay", related_name="%(class)s_assay" ) | |
| class Meta: | |
| db_table = u'study_assay' | |
| class Elementresult(models.Model): | |
| elementresult_id = models.IntegerField(primary_key=True) | |
| element = models.ForeignKey("Element", related_name="%(class)s_element" ) | |
| quantification = models.ForeignKey("Quantification", related_name="%(class)s_quantification" ) | |
| signal = models.FloatField() | |
| class Meta: | |
| db_table = u'elementresult' | |
| class ElementresultRelationship(models.Model): | |
| elementresult_relationship_id = models.IntegerField(primary_key=True) | |
| subject = models.ForeignKey("Elementresult", related_name="%(class)s_subject" ) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| object = models.ForeignKey("Elementresult", related_name="%(class)s_object" ) | |
| value = models.TextField(blank=True) | |
| rank = models.IntegerField() | |
| class Meta: | |
| db_table = u'elementresult_relationship' | |
| class Study(models.Model): | |
| study_id = models.IntegerField(primary_key=True) | |
| contact = models.ForeignKey("Contact", related_name="%(class)s_contact" ) | |
| pub = models.ForeignKey("Pub", null=True, blank=True) | |
| dbxref = models.ForeignKey("Dbxref", null=True, blank=True) | |
| name = models.TextField(unique=True) | |
| description = models.TextField(blank=True) | |
| class Meta: | |
| db_table = u'study' | |
| class Studydesignprop(models.Model): | |
| studydesignprop_id = models.IntegerField(primary_key=True) | |
| studydesign = models.ForeignKey("Studydesign", related_name="%(class)s_studydesign" ) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| value = models.TextField(blank=True) | |
| rank = models.IntegerField() | |
| class Meta: | |
| db_table = u'studydesignprop' | |
| class Studydesign(models.Model): | |
| studydesign_id = models.IntegerField(primary_key=True) | |
| study = models.ForeignKey("Study", related_name="%(class)s_study" ) | |
| description = models.TextField(blank=True) | |
| class Meta: | |
| db_table = u'studydesign' | |
| class Studyfactor(models.Model): | |
| studyfactor_id = models.IntegerField(primary_key=True) | |
| studydesign = models.ForeignKey("Studydesign", related_name="%(class)s_studydesign" ) | |
| type = models.ForeignKey("Cvterm", null=True, blank=True) | |
| name = models.TextField() | |
| description = models.TextField(blank=True) | |
| class Meta: | |
| db_table = u'studyfactor' | |
| class Studyfactorvalue(models.Model): | |
| studyfactorvalue_id = models.IntegerField(primary_key=True) | |
| studyfactor = models.ForeignKey("Studyfactor", related_name="%(class)s_studyfactor" ) | |
| assay = models.ForeignKey("Assay", related_name="%(class)s_assay" ) | |
| factorvalue = models.TextField(blank=True) | |
| name = models.TextField(blank=True) | |
| rank = models.IntegerField() | |
| class Meta: | |
| db_table = u'studyfactorvalue' | |
| class Studyprop(models.Model): | |
| studyprop_id = models.IntegerField(primary_key=True) | |
| study = models.ForeignKey("Study", related_name="%(class)s_study" ) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| value = models.TextField(blank=True) | |
| rank = models.IntegerField() | |
| class Meta: | |
| db_table = u'studyprop' | |
| class StudypropFeature(models.Model): | |
| studyprop_feature_id = models.IntegerField(primary_key=True) | |
| studyprop = models.ForeignKey("Studyprop", related_name="%(class)s_studyprop" ) | |
| feature = models.ForeignKey("Feature", related_name="%(class)s_feature" ) | |
| type = models.ForeignKey("Cvterm", null=True, blank=True) | |
| class Meta: | |
| db_table = u'studyprop_feature' | |
| class StockpropPub(models.Model): | |
| stockprop_pub_id = models.IntegerField(primary_key=True) | |
| stockprop = models.ForeignKey("Stockprop", related_name="%(class)s_stockprop" ) | |
| pub = models.ForeignKey("Pub", related_name="%(class)s_pub" ) | |
| class Meta: | |
| db_table = u'stockprop_pub' | |
| class StockPub(models.Model): | |
| stock_pub_id = models.IntegerField(primary_key=True) | |
| stock = models.ForeignKey("Stock", related_name="%(class)s_stock" ) | |
| pub = models.ForeignKey("Pub", related_name="%(class)s_pub" ) | |
| class Meta: | |
| db_table = u'stock_pub' | |
| class Stockprop(models.Model): | |
| stockprop_id = models.IntegerField(primary_key=True) | |
| stock = models.ForeignKey("Stock", related_name="%(class)s_stock" ) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| value = models.TextField(blank=True) | |
| rank = models.IntegerField() | |
| class Meta: | |
| db_table = u'stockprop' | |
| class StockRelationship(models.Model): | |
| stock_relationship_id = models.IntegerField(primary_key=True) | |
| subject = models.ForeignKey("Stock", related_name="%(class)s_subject" ) | |
| object = models.ForeignKey("Stock", related_name="%(class)s_object" ) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| value = models.TextField(blank=True) | |
| rank = models.IntegerField() | |
| class Meta: | |
| db_table = u'stock_relationship' | |
| class StockRelationshipPub(models.Model): | |
| stock_relationship_pub_id = models.IntegerField(primary_key=True) | |
| stock_relationship = models.ForeignKey("StockRelationship", related_name="%(class)s_relationship" ) | |
| pub = models.ForeignKey("Pub", related_name="%(class)s_pub" ) | |
| class Meta: | |
| db_table = u'stock_relationship_pub' | |
| class Stock(models.Model): | |
| stock_id = models.IntegerField(primary_key=True) | |
| dbxref = models.ForeignKey("Dbxref", null=True, blank=True) | |
| organism = models.ForeignKey("Organism", related_name="%(class)s_organism" ) | |
| name = models.CharField(max_length=255, blank=True) | |
| uniquename = models.TextField() | |
| description = models.TextField(blank=True) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| is_obsolete = models.BooleanField() | |
| class Meta: | |
| db_table = u'stock' | |
| class StockDbxref(models.Model): | |
| stock_dbxref_id = models.IntegerField(primary_key=True) | |
| stock = models.ForeignKey("Stock", related_name="%(class)s_stock" ) | |
| dbxref = models.ForeignKey("Dbxref", related_name="%(class)s_dbxref" ) | |
| is_current = models.BooleanField() | |
| class Meta: | |
| db_table = u'stock_dbxref' | |
| class StockCvterm(models.Model): | |
| stock_cvterm_id = models.IntegerField(primary_key=True) | |
| stock = models.ForeignKey("Stock", related_name="%(class)s_stock" ) | |
| cvterm = models.ForeignKey("Cvterm", related_name="%(class)s_cvterm" ) | |
| pub = models.ForeignKey("Pub", related_name="%(class)s_pub" ) | |
| class Meta: | |
| db_table = u'stock_cvterm' | |
| class Stockcollection(models.Model): | |
| stockcollection_id = models.IntegerField(primary_key=True) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| contact = models.ForeignKey("Contact", null=True, blank=True) | |
| name = models.CharField(max_length=255, blank=True) | |
| uniquename = models.TextField() | |
| class Meta: | |
| db_table = u'stockcollection' | |
| class StockGenotype(models.Model): | |
| stock_genotype_id = models.IntegerField(primary_key=True) | |
| stock = models.ForeignKey("Stock", related_name="%(class)s_stock" ) | |
| genotype = models.ForeignKey("Genotype", related_name="%(class)s_genotype" ) | |
| class Meta: | |
| db_table = u'stock_genotype' | |
| class Stockcollectionprop(models.Model): | |
| stockcollectionprop_id = models.IntegerField(primary_key=True) | |
| stockcollection = models.ForeignKey("Stockcollection", related_name="%(class)s_stockcollection" ) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| value = models.TextField(blank=True) | |
| rank = models.IntegerField() | |
| class Meta: | |
| db_table = u'stockcollectionprop' | |
| class StockcollectionStock(models.Model): | |
| stockcollection_stock_id = models.IntegerField(primary_key=True) | |
| stockcollection = models.ForeignKey("Stockcollection", related_name="%(class)s_stockcollection" ) | |
| stock = models.ForeignKey("Stock", related_name="%(class)s_stock" ) | |
| class Meta: | |
| db_table = u'stockcollection_stock' | |
| class LibrarySynonym(models.Model): | |
| library_synonym_id = models.IntegerField(primary_key=True) | |
| synonym = models.ForeignKey("Synonym", related_name="%(class)s_synonym" ) | |
| library = models.ForeignKey("Library", related_name="%(class)s_library" ) | |
| pub = models.ForeignKey("Pub", related_name="%(class)s_pub" ) | |
| is_current = models.BooleanField() | |
| is_internal = models.BooleanField() | |
| class Meta: | |
| db_table = u'library_synonym' | |
| class Libraryprop(models.Model): | |
| libraryprop_id = models.IntegerField(primary_key=True) | |
| library = models.ForeignKey("Library", related_name="%(class)s_library" ) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| value = models.TextField(blank=True) | |
| rank = models.IntegerField() | |
| class Meta: | |
| db_table = u'libraryprop' | |
| class LibraryPub(models.Model): | |
| library_pub_id = models.IntegerField(primary_key=True) | |
| library = models.ForeignKey("Library", related_name="%(class)s_library" ) | |
| pub = models.ForeignKey("Pub", related_name="%(class)s_pub" ) | |
| class Meta: | |
| db_table = u'library_pub' | |
| class LibrarypropPub(models.Model): | |
| libraryprop_pub_id = models.IntegerField(primary_key=True) | |
| libraryprop = models.ForeignKey("Libraryprop", related_name="%(class)s_libraryprop" ) | |
| pub = models.ForeignKey("Pub", related_name="%(class)s_pub" ) | |
| class Meta: | |
| db_table = u'libraryprop_pub' | |
| class LibraryCvterm(models.Model): | |
| library_cvterm_id = models.IntegerField(primary_key=True) | |
| library = models.ForeignKey("Library", related_name="%(class)s_library" ) | |
| cvterm = models.ForeignKey("Cvterm", related_name="%(class)s_cvterm" ) | |
| pub = models.ForeignKey("Pub", related_name="%(class)s_pub" ) | |
| class Meta: | |
| db_table = u'library_cvterm' | |
| class Synonym(models.Model): | |
| synonym_id = models.IntegerField(primary_key=True) | |
| name = models.CharField(max_length=255) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| synonym_sgml = models.CharField(max_length=255) | |
| class Meta: | |
| db_table = u'synonym' | |
| class Library(models.Model): | |
| library_id = models.IntegerField(primary_key=True) | |
| organism = models.ForeignKey("Organism", related_name="%(class)s_organism" ) | |
| name = models.CharField(max_length=255, blank=True) | |
| uniquename = models.TextField() | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| is_obsolete = models.IntegerField() | |
| timeaccessioned = models.DateTimeField() | |
| timelastmodified = models.DateTimeField() | |
| class Meta: | |
| db_table = u'library' | |
| class LibraryFeature(models.Model): | |
| library_feature_id = models.IntegerField(primary_key=True) | |
| library = models.ForeignKey("Library", related_name="%(class)s_library" ) | |
| feature = models.ForeignKey("Feature", related_name="%(class)s_feature" ) | |
| class Meta: | |
| db_table = u'library_feature' | |
| class LibraryDbxref(models.Model): | |
| library_dbxref_id = models.IntegerField(primary_key=True) | |
| library = models.ForeignKey("Library", related_name="%(class)s_library" ) | |
| dbxref = models.ForeignKey("Dbxref", related_name="%(class)s_dbxref" ) | |
| is_current = models.BooleanField() | |
| class Meta: | |
| db_table = u'library_dbxref' | |
| class CellLineSynonym(models.Model): | |
| cell_line_synonym_id = models.IntegerField(primary_key=True) | |
| cell_line = models.ForeignKey("CellLine", related_name="%(class)s_line" ) | |
| synonym = models.ForeignKey("Synonym", related_name="%(class)s_synonym" ) | |
| pub = models.ForeignKey("Pub", related_name="%(class)s_pub" ) | |
| is_current = models.BooleanField() | |
| is_internal = models.BooleanField() | |
| class Meta: | |
| db_table = u'cell_line_synonym' | |
| class CellLineCvterm(models.Model): | |
| cell_line_cvterm_id = models.IntegerField(primary_key=True) | |
| cell_line = models.ForeignKey("CellLine", related_name="%(class)s_line" ) | |
| cvterm = models.ForeignKey("Cvterm", related_name="%(class)s_cvterm" ) | |
| pub = models.ForeignKey("Pub", related_name="%(class)s_pub" ) | |
| rank = models.IntegerField() | |
| class Meta: | |
| db_table = u'cell_line_cvterm' | |
| class CellLineDbxref(models.Model): | |
| cell_line_dbxref_id = models.IntegerField(primary_key=True) | |
| cell_line = models.ForeignKey("CellLine", related_name="%(class)s_line" ) | |
| dbxref = models.ForeignKey("Dbxref", related_name="%(class)s_dbxref" ) | |
| is_current = models.BooleanField() | |
| class Meta: | |
| db_table = u'cell_line_dbxref' | |
| class CellLineRelationship(models.Model): | |
| cell_line_relationship_id = models.IntegerField(primary_key=True) | |
| subject = models.ForeignKey("CellLine", related_name="%(class)s_subject" ) | |
| object = models.ForeignKey("CellLine", related_name="%(class)s_object" ) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| class Meta: | |
| db_table = u'cell_line_relationship' | |
| class CellLine(models.Model): | |
| cell_line_id = models.IntegerField(primary_key=True) | |
| name = models.CharField(max_length=255, blank=True) | |
| uniquename = models.CharField(max_length=255) | |
| organism = models.ForeignKey("Organism", related_name="%(class)s_organism" ) | |
| timeaccessioned = models.DateTimeField() | |
| timelastmodified = models.DateTimeField() | |
| class Meta: | |
| db_table = u'cell_line' | |
| class CellLineprop(models.Model): | |
| cell_lineprop_id = models.IntegerField(primary_key=True) | |
| cell_line = models.ForeignKey("CellLine", related_name="%(class)s_line" ) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| value = models.TextField(blank=True) | |
| rank = models.IntegerField() | |
| class Meta: | |
| db_table = u'cell_lineprop' | |
| class CellLinepropPub(models.Model): | |
| cell_lineprop_pub_id = models.IntegerField(primary_key=True) | |
| cell_lineprop = models.ForeignKey("CellLineprop", related_name="%(class)s_lineprop" ) | |
| pub = models.ForeignKey("Pub", related_name="%(class)s_pub" ) | |
| class Meta: | |
| db_table = u'cell_lineprop_pub' | |
| class FpKey(models.Model): | |
| feature_id = models.IntegerField(null=True, blank=True) | |
| pkey = models.CharField(max_length=1024, blank=True) | |
| value = models.TextField(blank=True) | |
| class Meta: | |
| db_table = u'fp_key' | |
| class CellLineLibrary(models.Model): | |
| cell_line_library_id = models.IntegerField(primary_key=True) | |
| cell_line = models.ForeignKey("CellLine", related_name="%(class)s_line" ) | |
| library = models.ForeignKey("Library", related_name="%(class)s_library" ) | |
| pub = models.ForeignKey("Pub", related_name="%(class)s_pub" ) | |
| class Meta: | |
| db_table = u'cell_line_library' | |
| class Gffatts(models.Model): | |
| feature_id = models.IntegerField(null=True, blank=True) | |
| type = models.TextField(blank=True) | |
| attribute = models.CharField(max_length=100, blank=True) # Changed max length from -1 to 100 | |
| class Meta: | |
| db_table = u'gffatts' | |
| class Gff3Atts(models.Model): | |
| feature_id = models.IntegerField(null=True, blank=True) | |
| type = models.TextField(blank=True) | |
| attribute = models.CharField(max_length=100, blank=True) # Changed max length from -1 to 100 | |
| class Meta: | |
| db_table = u'gff3atts' | |
| class CellLineFeature(models.Model): | |
| cell_line_feature_id = models.IntegerField(primary_key=True) | |
| cell_line = models.ForeignKey("CellLine", related_name="%(class)s_line" ) | |
| feature = models.ForeignKey("Feature", related_name="%(class)s_feature" ) | |
| pub = models.ForeignKey("Pub", related_name="%(class)s_pub" ) | |
| class Meta: | |
| db_table = u'cell_line_feature' | |
| class Gff3View(models.Model): | |
| feature_id = models.IntegerField(null=True, blank=True) | |
| ref = models.CharField(max_length=255, blank=True) | |
| source = models.CharField(max_length=255, blank=True) | |
| type = models.CharField(max_length=1024, blank=True) | |
| fstart = models.IntegerField(null=True, blank=True) | |
| fend = models.IntegerField(null=True, blank=True) | |
| score = models.FloatField(null=True, blank=True) | |
| strand = models.SmallIntegerField(null=True, blank=True) | |
| phase = models.IntegerField(null=True, blank=True) | |
| seqlen = models.IntegerField(null=True, blank=True) | |
| name = models.CharField(max_length=255, blank=True) | |
| organism_id = models.IntegerField(null=True, blank=True) | |
| class Meta: | |
| db_table = u'gff3view' | |
| class AllFeatureNames(models.Model): | |
| feature_id = models.IntegerField(null=True, blank=True) | |
| name = models.CharField(max_length=255, blank=True) | |
| organism_id = models.IntegerField(null=True, blank=True) | |
| class Meta: | |
| db_table = u'all_feature_names' | |
| class CellLineCvtermprop(models.Model): | |
| cell_line_cvtermprop_id = models.IntegerField(primary_key=True) | |
| cell_line_cvterm = models.ForeignKey("CellLineCvterm", related_name="%(class)s_cvterm" ) | |
| type = models.ForeignKey("Cvterm", related_name="%(class)s_type" ) | |
| value = models.TextField(blank=True) | |
| rank = models.IntegerField() | |
| class Meta: | |
| db_table = u'cell_line_cvtermprop' | |
| class Dfeatureloc(models.Model): | |
| featureloc_id = models.IntegerField(null=True, blank=True) | |
| feature_id = models.IntegerField(null=True, blank=True) | |
| srcfeature_id = models.IntegerField(null=True, blank=True) | |
| nbeg = models.IntegerField(null=True, blank=True) | |
| is_nbeg_partial = models.NullBooleanField(null=True, blank=True) | |
| nend = models.IntegerField(null=True, blank=True) | |
| is_nend_partial = models.NullBooleanField(null=True, blank=True) | |
| strand = models.SmallIntegerField(null=True, blank=True) | |
| phase = models.IntegerField(null=True, blank=True) | |
| residue_info = models.TextField(blank=True) | |
| locgroup = models.IntegerField(null=True, blank=True) | |
| rank = models.IntegerField(null=True, blank=True) | |
| class Meta: | |
| db_table = u'dfeatureloc' | |
| class FType(models.Model): | |
| feature_id = models.IntegerField(null=True, blank=True) | |
| name = models.CharField(max_length=255, blank=True) | |
| dbxref_id = models.IntegerField(null=True, blank=True) | |
| type = models.CharField(max_length=1024, blank=True) | |
| residues = models.TextField(blank=True) | |
| seqlen = models.IntegerField(null=True, blank=True) | |
| md5checksum = models.CharField(max_length=32, blank=True) | |
| type_id = models.IntegerField(null=True, blank=True) | |
| timeaccessioned = models.DateTimeField(null=True, blank=True) | |
| timelastmodified = models.DateTimeField(null=True, blank=True) | |
| class Meta: | |
| db_table = u'f_type' | |
| class CellLinePub(models.Model): | |
| cell_line_pub_id = models.IntegerField(primary_key=True) | |
| cell_line = models.ForeignKey("CellLine", related_name="%(class)s_line" ) | |
| pub = models.ForeignKey("Pub", related_name="%(class)s_pub" ) | |
| class Meta: | |
| db_table = u'cell_line_pub' | |
| class FeatureMeets(models.Model): | |
| subject_id = models.IntegerField(null=True, blank=True) | |
| object_id = models.IntegerField(null=True, blank=True) | |
| class Meta: | |
| db_table = u'feature_meets' | |
| class FeatureMeetsOnSameStrand(models.Model): | |
| subject_id = models.IntegerField(null=True, blank=True) | |
| object_id = models.IntegerField(null=True, blank=True) | |
| class Meta: | |
| db_table = u'feature_meets_on_same_strand' | |
| class FnrType(models.Model): | |
| feature_id = models.IntegerField(null=True, blank=True) | |
| name = models.CharField(max_length=255, blank=True) | |
| dbxref_id = models.IntegerField(null=True, blank=True) | |
| type = models.CharField(max_length=1024, blank=True) | |
| residues = models.TextField(blank=True) | |
| seqlen = models.IntegerField(null=True, blank=True) | |
| md5checksum = models.CharField(max_length=32, blank=True) | |
| type_id = models.IntegerField(null=True, blank=True) | |
| timeaccessioned = models.DateTimeField(null=True, blank=True) | |
| timelastmodified = models.DateTimeField(null=True, blank=True) | |
| class Meta: | |
| db_table = u'fnr_type' | |
| class FLoc(models.Model): | |
| feature_id = models.IntegerField(null=True, blank=True) | |
| name = models.CharField(max_length=255, blank=True) | |
| dbxref_id = models.IntegerField(null=True, blank=True) | |
| nbeg = models.IntegerField(null=True, blank=True) | |
| nend = models.IntegerField(null=True, blank=True) | |
| strand = models.SmallIntegerField(null=True, blank=True) | |
| class Meta: | |
| db_table = u'f_loc' | |
| class FeatureDisjoint(models.Model): | |
| subject_id = models.IntegerField(null=True, blank=True) | |
| object_id = models.IntegerField(null=True, blank=True) | |
| class Meta: | |
| db_table = u'feature_disjoint' | |
| class FeatureUnion(models.Model): | |
| subject_id = models.IntegerField(null=True, blank=True) | |
| object_id = models.IntegerField(null=True, blank=True) | |
| srcfeature_id = models.IntegerField(null=True, blank=True) | |
| subject_strand = models.SmallIntegerField(null=True, blank=True) | |
| object_strand = models.SmallIntegerField(null=True, blank=True) | |
| fmin = models.IntegerField(null=True, blank=True) | |
| fmax = models.IntegerField(null=True, blank=True) | |
| class Meta: | |
| db_table = u'feature_union' | |
| class FeatureIntersection(models.Model): | |
| subject_id = models.IntegerField(null=True, blank=True) | |
| object_id = models.IntegerField(null=True, blank=True) | |
| srcfeature_id = models.IntegerField(null=True, blank=True) | |
| subject_strand = models.SmallIntegerField(null=True, blank=True) | |
| object_strand = models.SmallIntegerField(null=True, blank=True) | |
| fmin = models.IntegerField(null=True, blank=True) | |
| fmax = models.IntegerField(null=True, blank=True) | |
| class Meta: | |
| db_table = u'feature_intersection' | |
| class FeatureDifference(models.Model): | |
| subject_id = models.IntegerField(null=True, blank=True) | |
| object_id = models.IntegerField(null=True, blank=True) | |
| srcfeature_id = models.SmallIntegerField(null=True, blank=True) | |
| fmin = models.IntegerField(null=True, blank=True) | |
| fmax = models.IntegerField(null=True, blank=True) | |
| strand = models.IntegerField(null=True, blank=True) | |
| class Meta: | |
| db_table = u'feature_difference' | |
| class FeatureDistance(models.Model): | |
| subject_id = models.IntegerField(null=True, blank=True) | |
| object_id = models.IntegerField(null=True, blank=True) | |
| srcfeature_id = models.IntegerField(null=True, blank=True) | |
| subject_strand = models.SmallIntegerField(null=True, blank=True) | |
| object_strand = models.SmallIntegerField(null=True, blank=True) | |
| distance = models.IntegerField(null=True, blank=True) | |
| class Meta: | |
| db_table = u'feature_distance' | |
| class FeatureContains(models.Model): | |
| subject_id = models.IntegerField(null=True, blank=True) | |
| object_id = models.IntegerField(null=True, blank=True) | |
| class Meta: | |
| db_table = u'feature_contains' | |
| class FeaturesetMeets(models.Model): | |
| subject_id = models.IntegerField(null=True, blank=True) | |
| object_id = models.IntegerField(null=True, blank=True) | |
| class Meta: | |
| db_table = u'featureset_meets' | |
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