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February 11, 2019 16:04
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Extract all FASTQ headers
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| IFS=$'\n' | |
| for line in `cat fastq_list.tsv`; do | |
| zcat $line | head -n 1 | awk -v fname=$line -v OFS="\t" '{ print $0, fname}' >> fastq_headers.tsv | |
| done |
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