Created
December 6, 2018 16:45
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BamSurgeon Conda Environment
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| name: bamsurgeon | |
| channels: | |
| - bioconda | |
| - conda-forge | |
| - defaults | |
| dependencies: | |
| - python=2.7 | |
| - bwa=0.7.17 | |
| - picard==2.9.2 | |
| - velvet==1.2.10 | |
| - exonerate==2.4.0 | |
| - bcftools==1.9 | |
| - samtools==1.9 | |
| - htslib==1.9 | |
| - cython==0.29.1 | |
| - pip: | |
| - git+https://github.com/adamewing/bamsurgeon@d28a1544a4549385dcf867a48b0515a4b9c85d45 | |
| - pysam==0.15.1 |
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