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Fisher vectors with sklearn
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import numpy as np | |
import pdb | |
from sklearn.datasets import make_classification | |
from sklearn.mixture import GaussianMixture as GMM | |
def fisher_vector(xx, gmm): | |
"""Computes the Fisher vector on a set of descriptors. | |
Parameters | |
---------- | |
xx: array_like, shape (N, D) or (D, ) | |
The set of descriptors | |
gmm: instance of sklearn mixture.GMM object | |
Gauassian mixture model of the descriptors. | |
Returns | |
------- | |
fv: array_like, shape (K + 2 * D * K, ) | |
Fisher vector (derivatives with respect to the mixing weights, means | |
and variances) of the given descriptors. | |
Reference | |
--------- | |
J. Krapac, J. Verbeek, F. Jurie. Modeling Spatial Layout with Fisher | |
Vectors for Image Categorization. In ICCV, 2011. | |
http://hal.inria.fr/docs/00/61/94/03/PDF/final.r1.pdf | |
""" | |
xx = np.atleast_2d(xx) | |
N = xx.shape[0] | |
# Compute posterior probabilities. | |
Q = gmm.predict_proba(xx) # NxK | |
# Compute the sufficient statistics of descriptors. | |
Q_sum = np.sum(Q, 0)[:, np.newaxis] / N | |
Q_xx = np.dot(Q.T, xx) / N | |
Q_xx_2 = np.dot(Q.T, xx ** 2) / N | |
# Compute derivatives with respect to mixing weights, means and variances. | |
d_pi = Q_sum.squeeze() - gmm.weights_ | |
d_mu = Q_xx - Q_sum * gmm.means_ | |
d_sigma = ( | |
- Q_xx_2 | |
- Q_sum * gmm.means_ ** 2 | |
+ Q_sum * gmm.covariances_ | |
+ 2 * Q_xx * gmm.means_) | |
# Merge derivatives into a vector. | |
return np.hstack((d_pi, d_mu.flatten(), d_sigma.flatten())) | |
def main(): | |
# Short demo. | |
K = 64 | |
N = 1000 | |
xx, _ = make_classification(n_samples=N) | |
xx_tr, xx_te = xx[: -100], xx[-100: ] | |
gmm = GMM(n_components=K, covariance_type='diag') | |
gmm.fit(xx_tr) | |
fv = fisher_vector(xx_te, gmm) | |
pdb.set_trace() | |
if __name__ == '__main__': | |
main() |
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Hai I'm beginner so i don't know working of fisher vector encoding. Please help to understand this