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darothen/README.md

Last active August 29, 2015 14:23
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mode_sunburst
Raw
README.md

Sunburst visualization of modal importance aerosol activation experiment results.

Raw
colorbrewer.js
// This product includes color specifications and designs developed by Cynthia Brewer (http://colorbrewer.org/).
var colorbrewer = {Dark2: {
3: ["#1b9e77","#d95f02","#7570b3"],
4: ["#1b9e77","#d95f02","#7570b3","#e7298a"],
5: ["#1b9e77","#d95f02","#7570b3","#e7298a","#66a61e"],
6: ["#1b9e77","#d95f02","#7570b3","#e7298a","#66a61e","#e6ab02"],
7: ["#1b9e77","#d95f02","#7570b3","#e7298a","#66a61e","#e6ab02","#a6761d"],
8: ["#1b9e77","#d95f02","#7570b3","#e7298a","#66a61e","#e6ab02","#a6761d","#666666"]
},
};
Raw
index.html
<!DOCTYPE html>
<html>
<head>
<meta charset="utf-8">
<script src="https://cdnjs.cloudflare.com/ajax/libs/d3/3.5.5/d3.min.js"></script>
<script src="colorbrewer.js"></script>
<style>
body {
font-family: 'Open Sans', sans-serif;
font-size: 12px;
font-weight: 400;
background-color: #fff;
margin-top: 10px;
}
#main {
width: 700px;
}
#sidebar {
float: right;
width: 100px;
}
#sequence {
margin-left: 50px;
width: 650px;
height: 70px;
}
#legend {
margin-top: 50px;
padding: 10px 0 0 3px;
visibility: visible;
}
#sequence text, #legend text {
font-weight: 600;
fill: #fff;
}
#chart {
width: 600px;
float: left;
}
#chart path {
stroke: #fff;
}
#percentage {
font-size: 2.5em;
}
</style>
</head>
<body>
<div id="main">
<div id="sequence"></div>
<div id="chart"></div>
<div id="sidebar">
<div id="legend"></div>
</div>
</div>
</body>
<script src="mode_sunburst.js"></script>
</html>
Raw
mode.json
{"name": "mode_data", "children": [{"name": "ACC", "children": [{"name": "AIT", "children": [{"name": "MBS", "size": 1}]}, {"name": "DST01", "children": [{"name": "MBS", "size": 19}, {"name": "MOS", "size": 6}, {"name": "SSLT01", "size": 5}]}, {"name": "MBS", "children": [{"name": "AIT", "size": 1}, {"name": "DST01", "size": 16}, {"name": "MOS", "size": 2318}, {"name": "SSLT01", "size": 561}]}, {"name": "MOS", "children": [{"name": "DST01", "size": 6}, {"name": "MBS", "size": 5364}, {"name": "SSLT01", "size": 3353}]}, {"name": "SSLT01", "children": [{"name": "DST01", "size": 1}, {"name": "MBS", "size": 1574}, {"name": "MOS", "size": 7344}]}]}, {"name": "DST01", "children": [{"name": "ACC", "children": [{"name": "DST02", "size": 5}, {"name": "MBS", "size": 2}, {"name": "MOS", "size": 2}]}, {"name": "DST02", "children": [{"name": "ACC", "size": 2}]}, {"name": "MBS", "children": [{"name": "ACC", "size": 4}, {"name": "MOS", "size": 1}]}, {"name": "MOS", "children": [{"name": "ACC", "size": 2}, {"name": "MBS", "size": 1}]}]}, {"name": "MBS", "children": [{"name": "ACC", "children": [{"name": "DST01", "size": 11}, {"name": "MOS", "size": 456}]}, {"name": "DST01", "children": [{"name": "ACC", "size": 5}]}, {"name": "MOS", "children": [{"name": "ACC", "size": 96}, {"name": "DST01", "size": 1}]}]}, {"name": "MOS", "children": [{"name": "ACC", "children": [{"name": "DST01", "size": 2}, {"name": "MBS", "size": 370}, {"name": "SSLT01", "size": 50}]}, {"name": "DST01", "children": [{"name": "ACC", "size": 1}]}, {"name": "MBS", "children": [{"name": "ACC", "size": 95}]}]}]}
Raw
mode_sunburst.js
//
// Based on: http://jsfiddle.net/QDP9H/
//
var json_file = "mode.json";
var modes_array = [
"ACC", "AIT", "MOS", "MBS", "DST01", "DST02", "SSLT01"
];
// Breadcrumb dimensions: width, height, spacing, width of tip/tail.
var b = {
w: 75, h: 30, s: 3, t: 10
};
var width = 600,
height = 600,
offset = 50,
radius = (Math.min(width, height) / 2) - offset,
color = d3.scale.ordinal()
.domain(modes_array)
.range(colorbrewer.Dark2[modes_array.length]),
totalCount = 0.0,
notchRads = Math.PI/8;
iterLevels = 0;
var svg = d3.select("#chart").append("svg:svg")
.attr("width", width)
.attr("height", height)
.append("svg:g")
.attr("id", "container")
.attr("transform", "translate(" + width / 2 + "," + height * .52 + ")");
var partition = d3.layout.partition()
.sort(null)
.size([2 * Math.PI - notchRads, 100])
.value(function(d) {
totalCount += d.size; // update total number of samples
if ( iterLevels < d.depth ) {
iterLevels += 1;
}
return d.size;
});
var arc = d3.svg.arc()
.startAngle(function(d) { return d.x + notchRads/2; })
.endAngle(function(d) { return d.x + d.dx + notchRads/2; })
.innerRadius(function(d) { return radius * (d.y) / 100; })
.outerRadius(function(d) { return radius * (d.y + d.dy) / 100; });
var legend = null;
// This main method creates the visualization as a callback
// to the JSON-reading method
d3.json(json_file, function(error, root) {
if (error) throw error;
console.log(root);
// Setup breadcumb trail elements
initializeBreadcrumbTrail();
var path = svg.datum(root).selectAll("path")
.data(partition.nodes)
.enter().append("path")
.attr("class", "arc")
.attr("name", function(d) { return d.name })
.attr("display", function(d) { return d.depth ? null : "none"; }) // hide inner ring
.attr("d", arc)
.style("fill", function(d) {
return color(d.name);
})
.on("mouseover", function(d) {
console.log(d.name, d.depth, d.x, d.dx);
mouseover(d);
});
// Add the mouseleave handler to the bounding circle
d3.select("#container").on("mouseleave", mouseleave);
// Add text inside the 'notch' denoting the iterations);
var g = svg.selectAll("g")
.data(range(1, iterLevels))
.enter().append("svg:g");
g.append("svg:text")
.attr("y", function(d) {
var vert = height/2;
var levelWidth = radius/(iterLevels + 1.0);
return -vert + levelWidth * (d - 0.5) + offset;
})
.attr("dy", "1em")
.attr("text-anchor", "middle")
.text(function(d) { return d });
svg.insert("svg:g", ":first-child")
.attr("transform", function(d) {
var levelWidth = radius/(iterLevels + 1.0);
var titleLoc = -height/2 - levelWidth/10. + offset
return "translate(0," + titleLoc + ")";
})
.append("svg:text")
.attr("class", "title")
.attr("dy", "0.35em")
.attr("text-anchor", "middle")
.style({
"fill": "#000",
"font-weight": "bold"
})
.text("Iteration");
drawLegend();
});
// Fade all but the current sequence, and show it in the
// breadcrumb trail
function mouseover(d) {
var percentage = (100 * d.value / totalCount).toPrecision(3);
var percentageString = percentage + "%";
if ( percentage < 0.1 ) {
percentageString = "< 0.1%";
}
d3.select("#percentage")
.text(percentageString);
var sequenceArray = getAncestors(d);
updateBreadcrumbs(sequenceArray, percentageString);
// Fade all the segments
d3.selectAll("path") // arcs in sunburst
.style("opacity", 0.3);
d3.selectAll(".legend_rec") // labels in legend
.style("opacity", 0.3);
// Highlight only those that are an ancestor of
// the current segment
svg.selectAll("path")
.filter(function(node) {
return (sequenceArray.indexOf(node) >= 0);
})
.style("opacity", 1);
}
// Restore everything to full opacity when moving off the vis
function mouseleave(d) {
// Hide the breadcrumb trail
d3.select("#trail")
.style("visibility", "hidden");
// Deactivate all segments during transition
d3.selectAll("path").on("mouseover", null);
// Transition each segment to full opacity then reactivate it
d3.selectAll("path")
.transition()
.duration(1000)
.style("opacity", 1)
.each("end", function() {
d3.select(this).on("mouseover", mouseover);
});
d3.selectAll(".legend_rec") // labels in legend
.transition()
.duration(1000)
.style("opacity", 1);
}
// Function for drawing the legend
function drawLegend() {
// Dimensions of legend item: width, height, spacing, radius of rounded rect.
var li = {
w: 75, h: 30, s: 3, r: 3
};
legend = d3.select("#legend").append("svg:svg")
.attr("width", li.w)
.attr("height", color.domain().length * (li.h + li.s));
var g = legend.selectAll("g")
.data(modes_array)
.enter().append("svg:g")
.attr("transform", function(d, i) {
return "translate(0," + (i+1) * (li.h + li.s) + ")";
});
g.append("svg:rect")
.attr("class", "legend_rec")
.attr("mode", function(d) { return d; })
.attr("rx", li.r)
.attr("ry", li.r)
.attr("width", li.w)
.attr("height", li.h)
.style("fill", function(d) { return color(d); });
g.append("svg:text")
.attr("x", li.w / 2)
.attr("y", li.h / 2)
.attr("dy", "0.35em")
.attr("text-anchor", "middle")
.text(function(d) { return d });
legend.insert("svg:g", ":first-child")
.attr("transform", function(d) {
return "translate(0,0)";
})
.append("svg:text")
.attr("class", "title")
.attr("x", li.w / 2)
.attr("y", li.h / 2)
.attr("dy", "0.35em")
.attr("text-anchor", "middle")
.style({
"fill": "#000",
"font-weight": "bold"
})
.text("Mode Name");
}
// Breadcrumb / sequence analysis
function initializeBreadcrumbTrail() {
// Add the svg area for the graphic
var trail = d3.select("#sequence").append("svg:svg")
.attr("width", width)
.attr("height", 50)
.attr("id", "trail");
// Add the label at the end, for the percentage
trail.append("svg:text")
.attr("id", "endlabel")
.style("fill", "#000");
}
// Generate a string that describes the points of a breadcrumb
// polygon
function breadcrumbPoints(d, i) {
var points = [];
points.push("0,0"); // these vertices are for notched rectangles
points.push(b.w + ",0");
points.push(b.w + b.t + "," + (b.h / 2));
points.push(b.w + "," + b.h);
points.push("0," + b.h);
if (i > 0) { // Leftmost breadcrumb; don't include 6th vertex.
points.push(b.t + "," + (b.h / 2));
}
return points.join(" ");
}
// Update the breadcumb trail sequence and percentage
function updateBreadcrumbs(nodeArray, percentageString) {
// Data join; key function combines name and depth
// (= position in sequence)
var g = d3.select("#trail").selectAll("g")
.data(nodeArray, function(d) { return d.name + d.depth; });
// Add breadcrumb and label for entering nodes
var entering = g.enter().append("svg:g");
entering.append("svg:polygon")
.attr("points", breadcrumbPoints)
.style("fill", function(d) { return color(d.name); });
entering.append("svg:text")
.attr("x", (b.w + b.t) / 2)
.attr("y", b.h/2)
.attr("dy", "0.35em")
.attr("text-anchor", "middle")
.text(function(d) { return d.name; });
// Set position for entering and updating nodes
g.attr("transform", function(d, i) {
return "translate(" + i*(b.w + b.s) + ",0)";
});
// Remove exiting nodes.
g.exit().remove()
// Now move and update the percentage at the end.
d3.select("#trail").select("#endlabel")
.attr("x", (nodeArray.length + 0.5) * (b.w + b.s))
.attr("y", b.h / 2)
.attr("dy", "0.35em")
.attr("text-anchor", "middle")
.text(percentageString);
// Make the breadcrumb trail visible if it's hidden
d3.select("#trail")
.style("visibility", "");
}
// Given a node in a partition layout, return an array of all of
// its ancestor nodes, highest first, but excluding the root.
function getAncestors(node) {
var path = [];
var current = node;
while ( current.parent ) {
path.unshift(current);
current = current.parent;
}
return path;
}
// Range function
function range(start, end) {
var rangeArray = [];
for (var i=start; i <= end; i++) {
rangeArray.push(i);
}
return rangeArray;
}
d3.select(self.frameElement).style("height", (height+100) + "px");
@mattrothenberg
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Looking good! I've made some changes on my machine, but I can't make a pull request. Recommendation(s) on how to merge?

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