Last active
December 20, 2015 04:28
-
-
Save datagistips/6070719 to your computer and use it in GitHub Desktop.
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
library(rgeos) | |
library(spdep) | |
# DISTANCE | |
distance <- function(pt1, pt2) { | |
dx <- pt1[1] - pt2[1] | |
dy <- pt1[2] - pt2[2] | |
l <- sqrt(dx^2 + dy^2) | |
return(l) | |
} | |
# SCALING | |
dorlingRadius <- function(f, values, ratio) { | |
nb <- poly2nb(f) | |
cumdist <- 0 | |
cumradius <- 0 | |
for (i in 1:length(nb)) { | |
if (!is.null(nb[[i]])) { | |
neighs <- nb[[i]][which(nb[[i]] < i)] | |
for (j in neighs) { | |
l <- distance(coordinates(f)[i, ], coordinates(f)[j, ]) | |
d <- sqrt(values[i]/pi) + sqrt(values[j]/pi) | |
cumdist <- cumdist + l | |
cumradius <- cumradius + d | |
} | |
} | |
} | |
scale <- cumdist/cumradius | |
radiuses <- sqrt(values/pi) * scale * ratio | |
return(radiuses) | |
} | |
## SHIFTING | |
dorlingParams <- function(f, value, nrescales, niter, tol) { | |
sqs <- seq(1, 0, length.out=nrescales) | |
for (ratio in sqs) { | |
coords <- coordinates(f) | |
row.names(coords) <- row.names(f) | |
radius <- dorlingRadius(f, value, ratio) | |
for (iter in 1:niter) { | |
overlapCount <- 0 | |
for (i in 1:nrow(coords)) { | |
for (j in 1:nrow(coords)) { | |
if (j != i) { | |
dx <- coords[i, 1] - coords[j, 1] | |
dy <- coords[i, 2] - coords[j, 2] | |
l <- sqrt(dx^2 + dy^2) | |
d <- radius[i] + radius[j] | |
prop <- (l-d)/l | |
dx <- dx * prop; #print(dx) | |
dy <- dy * prop; #print(dy) | |
if (l < d) { | |
if (abs(l - d) > tol) { | |
overlapCount <- overlapCount + 1 | |
coords[i, 1] <- coords[i, 1] - dx | |
coords[i, 2] <- coords[i, 2] - dy | |
} | |
} | |
} | |
} | |
} | |
} | |
print(paste("scale factor of", ratio, "=>", "number of overlaps :", overlapCount)) | |
if (overlapCount == 0) break | |
} | |
return(list(xy=coords, radius=radius)) | |
} |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment