| sudo apt update | |
| sudo apt install fuse libfuse-dev libicu-dev bzip2 libbz2-dev cmake git libattr1-dev zlib1g-dev g++ | |
| sudo snap install cmake --classic | |
| git clone https://github.com/sgan81/apfs-fuse.git | |
| cd apfs-fuse | |
| git submodule init | |
| git submodule update | |
| mkdir build |
| import seaborn as sns | |
| import pandas as pd | |
| import plotly.graph_objects as go | |
| import chart_studio.plotly as py | |
| import plotly | |
| # Path to the raw data: https://gist.github.com/nicolasesnis/eb3b35545e97926ab53e0617c5e4b639 | |
| data = pd.read_csv('your/path/to/the/raw/data.csv')[ | |
| ['user_id', 'time_install', 'event_name', 'time_event']] |
| """ | |
| create a BED file with position and strand given the genes from a | |
| TCGA level 3 expression matrix | |
| """ | |
| from cruzdb import Genome | |
| from toolshed import reader | |
| import sys | |
| import os.path as op | |
| matrix = sys.argv[1] # has a column named "probe" that is a refGen name |
Unfortunately, the Cisco AnyConnect client for Mac conflicts with Pow. And by "conflicts", I mean it causes a grey-screen-of-death kernel panic anytime you connect to the VPN and Pow is installed.
As an alternative, there is OpenConnect, a command-line client for Cisco's AnyConnect SSL VPN.
Here's how to get it set up on Mac OS X:
OpenConnect can be installed via homebrew:
brew update
brew install openconnect
| # First install tmux | |
| brew install tmux | |
| # For mouse support (for switching panes and windows) | |
| # Only needed if you are using Terminal.app (iTerm has mouse support) | |
| Install http://www.culater.net/software/SIMBL/SIMBL.php | |
| Then install https://bitheap.org/mouseterm/ | |
| # More on mouse support http://floriancrouzat.net/2010/07/run-tmux-with-mouse-support-in-mac-os-x-terminal-app/ |