glusterfs_heal_orphaned_gfid.sh

#!/bin/bash


## https://docs.gluster.org/en/latest/Troubleshooting/gfid-to-path/#references-and-links


gf_brick=/mnt/lv_swarm_prod3
gf_vol=gfs_lv_swarm_prod3


for gfid in $( gluster volume heal ${gf_vol} info | grep gfid | sed "s/<gfid://g" | sed "s/>//g" ); do
  folder1="${gfid:0:2}"
  folder2="${gfid:2:2}"

  # echo gfid = ${gfid}
  # echo ${folder1}
  # echo ${folder2}

  # echo rm -fv ${gf_brick}/.glusterfs/${folder1}/${folder2}/${gfid}

  getfattr -n trusted.glusterfs.pathinfo -e text ${gf_brick}/.glusterfs/${folder1}/${folder2}/${gfid}
  if [ ! "$?" -eq 0 ]; then
    rm -vf ${gf_brick}/.glusterfs/${folder1}/${folder2}/${gfid}
  fi

done

glusterfs_heal_orphaned_gfid.txt

Orphaned GlusterFS GFID’s are hard links under the $BRICK/.glusterfs directory that point to an inode of a file that has been removed manually, outside of the GlusterFS control ie not via client operation or the CLI. Thus this links will never get absorbed by the GlusterFS file system and are of no use at all and we can get read of them to free up some inode space.

When checking for this scenario on our production cluster I ran:

[root@ip-172-31-16-36 ~]# find /data/.glusterfs -type f -links -2 -print
/data/.glusterfs/indices/xattrop/xattrop-f805ddba-b680-465b-a3aa-04e6e5011582
NOTE: We can add the -path "./??/**/*" parameter to the above command for extra security as suggested in the comments below.

So far so good, only one file on the first node. On the second one:

[root@ip-172-31-10-36 ~]# find /data/.glusterfs -type f -links -2 -print
/data/.glusterfs/c5/cd/c5cd52ea-1737-4ebe-945e-b8d79e13fb86
/data/.glusterfs/c5/54/c554b554-1339-4fa8-8475-89f936f7b08a
.
.
.
/data/.glusterfs/f4/96/f496fb45-9ebe-4a1d-83d1-7cdf33dd769f
/data/.glusterfs/f4/71/f47145c1-9f81-46fe-a532-ea1734d1a745
/data/.glusterfs/f4/27/f427bba9-a4ff-42a8-8d0f-760a1934f0ee
I got around 6570 files returned by this command, all with timestamps dating from July/August. If I remember correctly that was the first time we had an issue with this cluster and we used rsync to recover some files that were written locally instead on the share. Somewhere during this operation these old links were left over.

But before we proceed first lets double check and get some info about one of the orphaned hard links like timestamps, inode number and extended attributes:

[root@ip-172-31-10-36 ~]# ls -l /data/.glusterfs/71/5d/715d4392-c44b-465c-8851-c316dd07471c
-rw-r--r-- 1 ec2-user ec2-user 173606 Jul 31  2014 /data/.glusterfs/71/5d/715d4392-c44b-465c-8851-c316dd07471c
 
[root@ip-172-31-10-36 ~]# getfattr -m . -d -e hex /data/.glusterfs/71/5d/715d4392-c44b-465c-8851-c316dd07471c
getfattr: Removing leading '/' from absolute path names
# file: data/.glusterfs/71/5d/715d4392-c44b-465c-8851-c316dd07471c
trusted.afr.gfs-volume-prod-client-0=0x000000000000000000000000
trusted.afr.gfs-volume-prod-client-1=0x000000000000000000000000
trusted.gfid=0x715d4392c44b465c8851c316dd07471c
 
[root@ip-172-31-10-36 ~]# stat -c %i /data/.glusterfs/71/5d/715d4392-c44b-465c-8851-c316dd07471c
14157107
Now that we have the file name and inode number we can check all the hard links outside .glusterfs sub directory that point to it using one of the following commands:

[root@ip-172-31-10-36 ~]# find /data -xdev -inum 14157107 ! -path \*.glusterfs/\* -print
[root@ip-172-31-10-36 ~]# find /data -xdev -samefile /data/.glusterfs/71/5d/715d4392-c44b-465c-8851-c316dd07471c ! -path \*.glusterfs/\* -print
Just for completeness here is another way to do it comparing the trusted.gfid extended attribute but it’s less efficient than the previous too:

[root@ip-172-31-10-36 ~]# find /data/ -noleaf -ignore_readdir_race -path /data/.glusterfs -prune -o -type f -print0 | xargs -0 getfattr -m . -n trusted.gfid -e hex | grep 'c316dd07471c'
If no files are returned then we can go on and remove the file. To remove all of them in one go we run:

[root@ip-172-31-10-36 ~]# find /data/.glusterfs -type f -links -2 -exec rm -fv {} \;
 Ta

glusterfs_heal_orphaned_gfid_old.sh

#!/bin/bash


gfbrick=/mnt/lv_swarm_prod3



for e in $( find ${gfbrick}/.glusterfs -type f -links -2 -print | grep -iv indices | grep -iv quarantine | grep -iv health_check ); do
  echo entry: $e
  if [ -f $e ]; then
    # ls -l $e

    echo getfattr 
    getfattr --absolute-names -m . -d -e hex $e
    echo inode: $( stat -c %i $e )

    echo check-find1
    find ${gfbrick} -xdev -inum $( stat -c %i $e ) ! -path \*.glusterfs/\* -print
    if [ $? -eq 0 ]; then
      echo check-find2
      find ${gfbrick} -xdev -samefile $e ! -path \*.glusterfs/\* -print
      if [ $? -eq 0 ]; then
        # echo check-find3
        # find ${gfbrick}/ -noleaf -ignore_readdir_race -path ${gfbrick}/.glusterfs -prune -o -type f -print0 | xargs -0 getfattr --absolute-names -m . -n trusted.gfid -e hex | grep $( basename $e ) | grep -iv "trusted.gfid: No such attribute"
        # if [ $? -eq 0 ]; then
          echo delete ok
          echo rm -fv $e
        # fi
      fi
    fi

    # echo sleep 10
    # sleep 10
  fi

done