Example of a script to execute a series of Salish Sea NEMO model runs.

script_runs_example.py

"""Example script to define and execute a series of Salish Sea NEMO model runs.
"""
from __future__ import absolute_import

import os

import salishsea_cmd.api


def main():
    run_desc = base_run_description()
    runs = ('RC_amp', 'RC_pha', 'RC_both')
    for run_id in runs:
        do_run(run_id, run_desc)


def do_run(run_id, run_desc):
    run_desc['run_id'] = run_id
    run_desc['namelists'][3] = (
        'Recenter_M2_amp_phase/mynamelist.lateral.{}'.format(run_id))
    salishsea_cmd.api.run_in_subprocess(
        run_id,
        run_desc,
        'iodef_tides.xml',
        os.path.join('/home/sallen/MEOPAR/SalishSea/', run_id))


def base_run_description():
    # Relative paths from SS-run-sets/SalishSea/tides/Recenter_M2_amp_phase/
    run_desc = salishsea_cmd.api.run_description(
        walltime='2:30:00',
        NEMO_code='../../../NEMO-code/',
        forcing='../../../NEMO-forcing/',
        runs_dir='../../../SalishSea/',
        init_conditions=(
            '/home/dlatorne/MEOPAR/SalishSea/spin-up/'
            '11apr20apr/SalishSea_01529280_restart.nc'),
    )
    run_desc['email'] = '[email protected]'
    # Relative paths to namelist section files
    run_desc['namelists'] = [
        'mynamelist.time.21apr25apr',
        '../namelist.domain',
        'mynamelist.surface',
        'mynamelist.lateral',
        '../namelist.bottom',
        '../namelist.tracers',
        'mynamelist.dynamics.15N',
        '../namelist.compute.12x27',
    ]
    return run_desc


if __name__ == '__main__':
    main()