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| def self.dir_exists?(sea) | |
| found = [] | |
| SNFS.each do |s| | |
| path = SEA_DIR_TEMPLATE.gsub(/SS/, s).gsub(/II/, sea.instrument) | |
| log("I can't find #{path}", 1) unless File.exists?(path) | |
| re = %r{ ^#{path}/\d+/\d+/#{sea}$ } | |
| puts re | |
| Find.find(path) do |p| | |
| puts p | |
| #sea_dir = a_dir_for(sea) | |
| #found << p if p == sea_dir and File.directory?(sea_dir) | |
| found << p if p =~ /#{re}/ and File.directory?(p) | |
| end | |
| end | |
| found | |
| end |
/tmp/snfs4/next-gen/solid/analysis/solid0312
/tmp/snfs4/next-gen/solid/analysis/solid0312/bf.config.yaml
/tmp/snfs4/next-gen/solid/analysis/solid0312/2010
/tmp/snfs4/next-gen/solid/analysis/solid0312/2010/03
/tmp/snfs4/next-gen/solid/analysis/solid0312/2010/03/0312_20100211_1_SP_ANG_LVNC109718_1_1sA_01003280944_3
/tmp/snfs4/next-gen/solid/analysis/solid0312/2010/03/0312_20100211_1_SP_ANG_LVNC109718_1_1sA_01003280944_3/input
/tmp/snfs4/next-gen/solid/analysis/solid0312/2010/03/0312_20100211_1_SP_ANG_LVNC109718_1_1sA_01003280944_3/input/0312_20100211_1_SP_ANG_LVNC109718_1_1sA_01003280944_3_F3_QV.qual
/tmp/snfs4/next-gen/solid/analysis/solid0312/2010/03/0312_20100211_1_SP_ANG_LVNC109718_1_1sA_01003280944_3/input/0312_20100211_1_SP_ANG_LVNC109718_1_1sA_01003280944_3_F3.csfasta
/tmp/snfs4/next-gen/solid/analysis/solid0312/2010/03/0312_20100211_1_SP_ANG_LVNC109718_1_1sA_01003280944_3
(?-mix: ^/tmp/snfs4/next-gen/solid/analysis/solid0312/\d+/\d+/0312_20100211_1_SP_ANG_LVNC109718_1_1sA_01003280944_3$ )