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@drio
Created May 17, 2010 18:38
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bfast2
DRD>> matching one end: RN : T30100230100230100230100230100101002301002301000000
DRD>> matching one end: #Entries: 1
DRD>> i: 0 referencePositions[ctr]: -1923810816 m->positions[i]: 80
DRD>> matching one end: RN : T3100230100230100230100023
DRD>> matching one end: #Entries: 27
DRD>> i: 0 referencePositions[ctr]: -1923810816 m->positions[i]: -1272874568
bfast: Align.c:235: AlignRGMatchesOneEnd: Assertion `readStartInsertionLengths[ctr] + readEndInsertionLengths[ctr] <= readLength' failed.
./run_bfast.sh: line 48: 16959 Aborted (core dumped) $bbin localalign -U $space -t -f $ref -n1 -m $seed.bmf > $seed.baf
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