dtxe

%% transforms
% transform into fsl coordinates (CT)
fslpos = elec.elecpos;
fslpos(:,4) = 1;
fslpos = (img_ct.transform \ fslpos')';

if img_ct.hdr.x_r == 1
  fslpos(:,1) = img_ct.dim(1) - fslpos(:,1);
end

dtxe

#!/bin/bash
# Usage dicom_to_nifti_anonymize [source dir] [dest dir] [participant ID]

if [[ $# -lt 2 ]]; then
	DEST=$1
else
  # make the directory if it doesn't exist
  if [ ! -d $2 ]; then
	  mkdir $2
  fi

dtxe

#!/bin/bash
#
# Simeon Wong

if [ -d $1 ]
then
  # make destination directory
  mkdir $2
  
  SRCBASE=$(basename $1 .ds)